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TISSUE KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Kidney
Tissue proteome
Kidney
Tissue methods
KIDNEY - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1253.9 nTPM
HPA:677.7 nTPM
GTEx:1253.9 nTPM
FANTOM5:127.0 Scaled Tags Per Million
KIDNEY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

KIDNEY - Annotated protein expression
Pending normal tissue analysis

KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

677.7
overview
Female, age 58
Kidney sample 55
nTPM: 818.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 804.1
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 598.3
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 792.5
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 483.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 546.2
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 1136.3
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 438
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 481.7
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1253.9
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 1219.6
Samples: 104

Max nTPM: 2266.2
Min nTPM: 735.4
Std nTPM: 345.1
Median nTPM: 1138.2
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 2266.2
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 2159.5
GTEX-15DCD-1926-SM-HAV33 70-79 years, female 2067.5
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 2016.4
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 1999.7
GTEX-1O9I2-1926-SM-F2TBQ 50-59 years, male 1943.8
GTEX-WL46-1926-SM-GNIN6 50-59 years, male 1878.5
GTEX-1JJE9-1026-SM-HL9TH 70-79 years, male 1844.9
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 1821.1
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 1804.9
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 1799.7
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 1758.9
GTEX-1117F-2126-SM-GIN9G 60-69 years, female 1705.1
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 1676.5
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 1619.9
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 1616.1
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 1567.1
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 1551.2
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 1540.4
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 1522.2
GTEX-1QAET-2126-SM-F2TBS 50-59 years, male 1483.3
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 1468.2
GTEX-1LH75-1326-SM-F2I1R 50-59 years, female 1444.5
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 1428.5
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 1402.2
GTEX-16XZY-1026-SM-HAV39 70-79 years, male 1387.9
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 1368.3
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 1359.8
GTEX-O5YV-1226-SM-EV795 60-69 years, female 1339.9
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 1332.1
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 1325.2
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 1312.9
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 1308.0
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 1286.1
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 1257.6
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 1251.9
GTEX-14PJ2-1826-SM-HL9UB 50-59 years, male 1251.1
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 1229.8
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 1227.6
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 1227.2
GTEX-1ICLY-2026-SM-GA913 50-59 years, male 1225.7
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 1225.2
GTEX-1RQEC-2426-SM-F2I1J 60-69 years, male 1203.5
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 1199.1
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 1189.4
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 1188.4
GTEX-14C39-2126-SM-664OH 40-49 years, male 1188.1
GTEX-13FHP-2126-SM-GIN8J 50-59 years, male 1174.7
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 1168.3
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 1167.0
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 1164.6
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 1142.9
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 1133.5
GTEX-13O3O-1726-SM-GJ3RL 60-69 years, female 1131.3
GTEX-16XZZ-2226-SM-HAV34 60-69 years, male 1118.6
GTEX-W5X1-1626-SM-H7OGO 40-49 years, female 1113.3
GTEX-QDVN-1726-SM-HL9TO 50-59 years, male 1091.3
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 1082.4
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 1081.1
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 1076.4
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 1069.2
GTEX-14JG1-2326-SM-HAUZ5 40-49 years, male 1064.2
GTEX-13112-2126-SM-5GCO4 50-59 years, male 1063.7
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 1051.8
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 1049.9
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 1048.9
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 1027.4
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 1024.5
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 1022.5
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 1014.8
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 1010.8
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 1006.7
GTEX-1HCVE-2126-SM-HL9UO 50-59 years, male 1004.3
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 1002.8
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 994.5
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 993.7
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 990.6
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 979.0
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 970.5
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 961.7
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 946.7
GTEX-RN64-1626-SM-48FD7 50-59 years, male 943.1
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 923.0
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 915.5
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 900.0
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 899.7
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 894.6
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 879.6
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 877.8
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 873.9
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 869.0
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 860.3
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 856.2
GTEX-16Z82-2826-SM-HAUZZ 60-69 years, male 853.2
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 851.5
GTEX-NFK9-1826-SM-HL9T3 40-49 years, male 841.1
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 829.2
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 829.0
GTEX-12696-0926-SM-5FQTV 60-69 years, male 828.8
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 821.2
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 812.5
GTEX-ZXG5-2026-SM-HAUZV 60-69 years, male 781.8
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 747.0
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 735.4
Show allShow less
Kidney - Medulla
Average nTPM: 1253.9
Samples: 11

Max nTPM: 2694.1
Min nTPM: 689.5
Std nTPM: 588.9
Median nTPM: 1070.1
GTEX-N7MS-1526-SM-HAUZP 60-69 years, male 2694.1
GTEX-QEG5-2026-SM-H6Q6I 20-29 years, male 2043.9
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 1531.9
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 1246.8
GTEX-SIU8-1926-SM-H7OG4 50-59 years, male 1102.3
GTEX-T6MN-1926-SM-GOQYD 50-59 years, male 1070.1
GTEX-P4QS-1226-SM-HPAG8 60-69 years, male 933.6
GTEX-QEG4-1526-SM-GPRWK 30-39 years, male 926.4
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 784.6
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 769.5
GTEX-S33H-1526-SM-GQ1CB 30-39 years, male 689.5
Show allShow less

KIDNEY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

127.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Kidney
Scaled Tags Per Million: 127.0
FF:10017-101C8 60,62,63 years, female 127.0

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