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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLCO2A1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
122.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
64.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
51.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
39.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
38.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
27.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
23.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
22.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
21.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
21.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
21.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
15.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
14.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
10.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
10.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
10.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
8.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
8.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
7.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
5.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
2.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLCO2A1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
353.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
224.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
208.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
191.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
187.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
180.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
174.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
171.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
169.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
167.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
164.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
156.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
153.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
152.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
150.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
145.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
141.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
139.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
138.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
138.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
135.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
132.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
131.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
131.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
130.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
129.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
128.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
128.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
127.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
127.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
127.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
127.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
126.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
123.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
123.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
121.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
120.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
120.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
117.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
116.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
116.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
115.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
114.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
114.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
114.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
114.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
113.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
112.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
111.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
111.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
107.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
106.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
105.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
105.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
104.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
104.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
104.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
104.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
102.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
102.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
102.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
102.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
101.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
99.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
98.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
98.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
98.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
98.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
97.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
95.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
95.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
94.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
93.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
93.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
92.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
92.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
91.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
91.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
90.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
90.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
89.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
88.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
88.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
87.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
87.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
86.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
86.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
86.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
86.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
86.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
86.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
85.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
85.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
85.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
85.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
84.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
84.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
84.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
84.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
80.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
80.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
79.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
79.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
78.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
78.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
78.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
78.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
77.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
77.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
77.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
76.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
76.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
76.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
76.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
76.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
75.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
75.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
74.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
74.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
73.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
72.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
72.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
72.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
72.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
72.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
71.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
70.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
70.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
69.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
69.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
69.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
68.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
68.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
68.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
68.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
68.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
67.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
67.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
66.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
66.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
65.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
65.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
65.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
65.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
65.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
64.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
64.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
64.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
64.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
62.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
62.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
62.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
61.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
61.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
61.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
61.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
61.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
60.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
60.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
60.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
60.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
59.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
58.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
58.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
58.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
58.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
58.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
57.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
57.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
57.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
57.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
57.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
57.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
56.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
56.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
56.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
55.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
55.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
55.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
55.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
55.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
55.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
54.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
54.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
53.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
53.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
53.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
53.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
53.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
53.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
53.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
52.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
52.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
52.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
52.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
52.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
50.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
49.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
49.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
49.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
49.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
48.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
48.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
48.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
48.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
48.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
47.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
47.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
47.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
47.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
47.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
46.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
45.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
44.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
44.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
44.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
44.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
44.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
44.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
43.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
42.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
42.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
42.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
42.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
42.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
40.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
40.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
40.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
39.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
39.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
39.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
39.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
38.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
38.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
38.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
38.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
38.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
38.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
38.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
37.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
37.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
37.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
37.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
37.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
36.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
36.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
36.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
36.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
35.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
35.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
35.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
34.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
34.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
34.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
34.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
33.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
32.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
32.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
31.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
30.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
30.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
30.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
29.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
29.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
28.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
27.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
27.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
26.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
26.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
26.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
25.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
25.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
25.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
24.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
23.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
22.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
21.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
21.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
21.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
21.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
19.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
19.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
16.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
15.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
15.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
15.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
15.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
14.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
14.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
11.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
11.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
11.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
10.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
9.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
9.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
9.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
6.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
5.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
3.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
3.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
3.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
3.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
3.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
2.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
2.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
2.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
2.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1.9
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLCO2A1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
202.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
143.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
127.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
126.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
116.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
97.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
97.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
96.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
92.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
84.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
78.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
71.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
66.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
63.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
63.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
60.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
59.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
57.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
56.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
56.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
55.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
55.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
54.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
52.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
52.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
48.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
46.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
44.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
44.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
43.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
43.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
37.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
32.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
30.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
29.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
29.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
27.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
25.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
23.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
12.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
8.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
5.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
4.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
4.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
4.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
3.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
2.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
2.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
2.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
2.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
1.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLCO2A1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
160.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
127.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
126.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
98.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
95.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
90.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
85.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
82.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
72.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
69.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
66.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
63.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
62.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
62.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
60.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
59.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
58.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
54.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
51.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
51.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
49.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
46.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
46.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
46.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
46.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
45.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
45.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
45.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
41.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
40.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
36.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
33.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
32.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
29.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
29.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
29.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
28.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
27.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
22.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
22.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
21.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
20.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
20.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.7
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
18.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
17.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
16.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
15.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
13.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
13.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
12.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
12.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
12.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
12.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
11.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
10.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
10.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
10.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
10.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
10.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
9.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
9.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
9.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
8.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
8.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
8.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
8.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
8.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
7.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
7.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
7.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
7.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
7.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
7.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
6.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
6.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
6.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
6.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
6.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
6.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
6.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
5.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
5.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
5.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
5.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
5.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
4.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
4.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
4.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
3.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
3.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
3.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
3.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
2.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
2.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
1.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088760003
Tumor
1.5
CPT0077490003
Tumor
1.4
CPT0010160003
Tumor
1.4
CPT0078830003
Tumor
1.3
CPT0079480003
Tumor
1.2
CPT0071150004
Tumor
1.2
CPT0012370003
Tumor
1.1
CPT0075720003
Tumor
1.1
CPT0006440003
Tumor
1.1
CPT0092730003
Tumor
1.1
CPT0025350003
Tumor
1.0
CPT0088710001
Normal
1.0
CPT0065450001
Normal
0.9
CPT0087040003
Tumor
0.9
CPT0092790003
Tumor
0.9
CPT0000780007
Tumor
0.9
CPT0065870003
Tumor
0.9
CPT0063320003
Tumor
0.9
CPT0015810003
Tumor
0.9
CPT0000790001
Normal
0.8
CPT0089020003
Tumor
0.8
CPT0088900003
Tumor
0.8
CPT0078930003
Tumor
0.7
CPT0015910003
Tumor
0.7
CPT0014370004
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0001190001
Normal
0.7
CPT0025230003
Tumor
0.7
CPT0000870016
Tumor
0.7
CPT0001350001
Normal
0.6
CPT0025170003
Tumor
0.6
CPT0086030003
Tumor
0.6
CPT0086870003
Tumor
0.6
CPT0066430001
Normal
0.5
CPT0019130003
Tumor
0.5
CPT0019990003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0065820001
Normal
0.5
CPT0026420001
Normal
0.5
CPT0077140001
Normal
0.5
CPT0092310003
Normal
0.5
CPT0089480003
Normal
0.4
CPT0066480003
Tumor
0.4
CPT0088780001
Normal
0.4
CPT0012080003
Tumor
0.4
CPT0006530001
Normal
0.4
CPT0023710001
Normal
0.4
CPT0006950001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0000890001
Normal
0.3
CPT0001270001
Normal
0.3
CPT0079230003
Tumor
0.3
CPT0089040001
Normal
0.3
CPT0023690003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0066520001
Normal
0.2
CPT0014350001
Normal
0.2
CPT0086370003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0092800003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0010170001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0079270003
Tumor
0.2
CPT0079430001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0088630003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0025920001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0001540009
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0012670003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0025580004
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0065810003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0014450004
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0069010001
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0021240003
Tumor
-0.3
CPT0001180009
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0012090003
Normal
-0.3
CPT0092290003
Tumor
-0.3
CPT0014160003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0075170001
Normal
-0.3
CPT0081990003
Tumor
-0.3
CPT0011240003
Tumor
-0.4
CPT0088920001
Normal
-0.4
CPT0002350011
Tumor
-0.4
CPT0069000003
Tumor
-0.4
CPT0092160003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0078990003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0006630003
Tumor
-0.4
CPT0001230001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0007870001
Normal
-0.5
CPT0007320003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0078670001
Normal
-0.5
CPT0012550003
Tumor
-0.5
CPT0063330001
Normal
-0.5
CPT0092190003
Normal
-0.5
CPT0088500001
Normal
-0.6
CPT0088550004
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0064370003
Tumor
-0.6
CPT0017850003
Tumor
-0.6
CPT0012570003
Normal
-0.7
CPT0064400001
Normal
-0.7
CPT0078530001
Normal
-0.7
CPT0012770003
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0086360003
Tumor
-0.7
CPT0024680001
Normal
-0.7
CPT0065430003
Tumor
-0.7
CPT0089460004
Tumor
-0.7
CPT0017410003
Tumor
-0.8
CPT0020120003
Tumor
-0.8
CPT0010110003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0012640003
Normal
-0.9
CPT0009020003
Normal
-1.0
CPT0002370001
Normal
-1.0
CPT0002270011
Tumor
-1.1
CPT0007860003
Tumor
-1.1
CPT0012280003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0012920003
Normal
-1.1
CPT0010120001
Normal
-1.2
CPT0063630003
Tumor
-1.2
CPT0025050003
Tumor
-1.2
CPT0078510003
Tumor
-1.2
CPT0012180003
Tumor
-1.2
CPT0009060003
Tumor
-1.2
CPT0078800003
Tumor
-1.5
CPT0079510001
Normal
-1.5
CPT0025110003
Tumor
-1.5
CPT0001340003
Tumor
-1.5
CPT0079180003
Tumor
-1.6
CPT0023350003
Tumor
-1.6
CPT0077110003
Tumor
-2.1
CPT0085670003
Tumor
-2.1
CPT0088690003
Tumor
-2.3
CPT0084560003
Tumor
-2.6
CPT0011410003
Tumor
-2.6
CPT0081880003
Tumor
-2.9
CPT0076330003
Tumor
-3.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.