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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.0
nTPM
HPA Brain:
80.0
nTPM
GTEx:
36.0
nTPM
FANTOM5:
112.9
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.0
Sample id
Sample description
nTPM
Amygdala nTPM: 48.3
1987
Female, age 91, left hemisphere
142.2
2517
Female, age 94, left hemisphere
49.6
2514
Male, age 75, right hemisphere
35.4
2814
Male, age 76, right hemisphere
8.5
2695
Female, age 67, right hemisphere
5.9
Basal amygdala nTPM: 69.5
2243
Female, age 91, right hemisphere
227.4
2685
Female, age 94, left hemisphere
56.5
2110
Male, age 80, left hemisphere
54.8
2827
Female, age 67, right hemisphere
28.3
2609
Male, age 75, right hemisphere
26.5
1955
Male, age 76, both hemispheres
23.5
Central amygdala nTPM: 47.0
2701
Female, age 91, right hemisphere
94.2
2239
Male, age 80, left hemisphere
75.3
2515
Male, age 75, right hemisphere
28.2
2826
Female, age 94, left hemisphere
25.6
1905
Male, age 76, both hemispheres
11.6
Corticomedial amygdala nTPM: 80.0
2242
Female, age 91, right hemisphere
175.4
2829
Male, age 80, left hemisphere
133.3
2429
Female, age 94, left hemisphere
52.9
2535
Female, age 67, right hemisphere
47.3
2240
Male, age 76, both hemispheres
36.5
2428
Male, age 75, right hemisphere
34.6
Lateral amygdala nTPM: 29.0
2255
Female, age 91, right hemisphere
72.3
2534
Female, age 94, left hemisphere
36.9
2256
Male, age 80, left hemisphere
20.1
1883
Male, age 76, both hemispheres
16.3
2516
Male, age 75, right hemisphere
14.7
2830
Female, age 67, right hemisphere
14.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.0
Samples: 152
Max nTPM: 154.6
Min nTPM: 2.8
Std nTPM: 26.9
Median nTPM: 28.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
154.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
147.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
113.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
104.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
93.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
92.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
90.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
89.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
87.3
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
85.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
84.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
80.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
77.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
76.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
68.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
67.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
67.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
67.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
66.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
65.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
64.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
64.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
62.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
61.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
61.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
60.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
59.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
56.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
56.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
54.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
52.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
52.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
51.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
51.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
51.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
50.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
48.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
47.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
46.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
46.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
45.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
44.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
44.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
42.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
38.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
38.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
37.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
37.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
37.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
36.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
36.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
35.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
35.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
35.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
35.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
33.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
33.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
32.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
31.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
30.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
30.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
30.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
29.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
29.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
29.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
28.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
28.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
28.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
28.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
27.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
27.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
27.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
27.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
26.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
26.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
25.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
25.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
25.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
25.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
24.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
24.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
24.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
24.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
24.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
23.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
23.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
22.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
22.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
22.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
22.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
22.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
21.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
21.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
21.6
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
21.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
20.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
20.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
20.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
19.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
19.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
18.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
18.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
17.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
17.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
17.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
16.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
14.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
14.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
14.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
14.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
13.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
13.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
13.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
12.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
11.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
11.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
11.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
10.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
10.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
10.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
10.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
9.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
9.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
9.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
9.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
8.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
8.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
8.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
8.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
7.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
4.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
3.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
2.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.