HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:54.7 nTPM
GTEx:34.9 nTPM
FANTOM5:58.7 Scaled Tags Per Million
Pig:128.6 nTPM
Mouse:37.0 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064763Antibody CAB008980
Glial cells Not detectedLow
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.7
Sample id Sample description nTPM
Hippocampus
nTPM: 48.5
2529 Female, age 94, left hemisphere 55.6
2621 Female, age 67, right hemisphere 55.3
1911 Female, age 85, right hemisphere 46.7
2148 Female, age 91, left hemisphere 45.7
1898 Male, age 80, left hemisphere 45.3
1855 Male, age 76, left hemisphere 42.3
Dentate gyrus
nTPM: 44.5
2530 Female, age 94, left hemisphere 50.6
2531 Female, age 67, both hemispheres 49.4
1927 Female, age 91, both hemispheres 42.7
2246 Female, age 85, both hemispheres 42.6
2528 Male, age 74, both hemispheres 41.8
2010 Male, age 76, both hemispheres 39.8
Entorhinal gyrus
nTPM: 54.7
2686 Male, age 75, right hemisphere 63.9
2613 Female, age 94, left hemisphere 57.1
2764 Male, age 80, right hemisphere 56.1
2117 Female, age 91, right hemisphere 52.7
1938 Female, age 85, left hemisphere 49.2
1787 Male, age 76, left hemisphere 49.0
Hippocampus, CA1
nTPM: 42.7
2527 Male, age 74, both hemispheres 47.5
2749 Male, age 80, left hemisphere 47.5
2082 Female, age 91, right hemisphere 44.0
1873 Female, age 85, both hemispheres 40.4
2045 Male, age 76, both hemispheres 33.9
Hippocampus, CA2
nTPM: 45.2
2437 Female, age 94, left hemisphere 53.4
1963 Male, age 80, left hemisphere 48.9
2113 Female, age 91, right hemisphere 45.1
1892 Male, age 76, both hemispheres 42.9
2249 Male, age 74, both hemispheres 40.5
1940 Female, age 85, left hemisphere 40.4
Hippocampus, CA3
nTPM: 48.1
2861 Female, age 67, both hemispheres 59.6
2137 Male, age 80, left hemisphere 49.6
2620 Female, age 94, left hemisphere 48.5
1891 Female, age 85, both hemispheres 44.4
1867 Male, age 76, both hemispheres 43.6
2436 Male, age 74, both hemispheres 43.2
Parahippocampal cortex
nTPM: 50.7
2622 Female, age 67, right hemisphere 60.1
2245 Female, age 91, both hemispheres 56.3
2692 Male, age 74, both hemispheres 54.1
2532 Female, age 72, left hemisphere 52.8
2693 Female, age 94, both hemispheres 51.6
1850 Male, age 80, both hemispheres 49.4
1990 Female, age 91, right hemisphere 48.0
2250 Female, age 67, right hemisphere 47.6
1933 Female, age 85, both hemispheres 45.6
2018 Male, age 76, both hemispheres 41.2
Perirhinal gyrus
nTPM: 48.5
1794 Male, age 80, right hemisphere 52.4
2848 Male, age 76, right hemisphere 49.7
1847 Female, age 91, left hemisphere 48.3
1841 Female, age 85, right hemisphere 46.2
2521 Female, age 94, right hemisphere 45.8
Subiculum
nTPM: 49.0
2438 Female, age 94, left hemisphere 57.7
2619 Male, age 74, both hemispheres 53.0
1901 Male, age 80, both hemispheres 48.7
2042 Male, age 76, both hemispheres 47.3
1977 Female, age 85, both hemispheres 45.9
2729 Female, age 91, right hemisphere 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 53.7
Min nTPM: 20.1
Std nTPM: 6.3
Median nTPM: 34.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 53.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 51.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 48.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 48.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 48.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 48.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 48.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 47.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 47.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 58.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.7
FF:10153-102I9 76 years, female 69.7
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 128.6
Pig sample Sample description nTPM
Subiculum
nTPM: 118.4
Samples: 4

Max nTPM: 156.0
Min nTPM: 98.5
Sample A Female 156.0
Sample B Female 98.5
Sample C Male 118.5
Sample D Male 100.4
Dorsal hippocampus
nTPM: 109.7
Samples: 4

Max nTPM: 126.1
Min nTPM: 89.1
Sample A Female 126.1
Sample B Female 109.3
Sample C Male 114.2
Sample D Male 89.1
Entorhinal cortex
nTPM: 128.6
Samples: 4

Max nTPM: 139.7
Min nTPM: 103.2
Sample A Female 139.7
Sample B Female 103.2
Sample C Male 137.8
Sample D Male 133.6
Ventral hippocampus
nTPM: 117.9
Samples: 4

Max nTPM: 144.9
Min nTPM: 86.1
Sample A Female 102.1
Sample B Female 86.1
Sample C Male 144.9
Sample D Male 138.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 40.5
Min nTPM: 32.4
Sample A Male 36.1
Sample B Male 40.5
Sample C Female 32.4
Sample D Female 39.0
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 35.7
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 35.7
Sample C Female 35.2
Sample D Female 31.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
70303034 Antisense, RP_050609_01_D12, Mouse strain C57BL/6J (56 days, male) 4.5

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