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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
113.7
nTPM
FANTOM5:
392.4
Scaled Tags Per Million
Allen mouse:
3.7
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
113.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 79.1
1984
Male, age 76, both hemispheres
91.4
2090
Male, age 80, both hemispheres
80.1
2188
Female, age 91, both hemispheres
79.0
2301
Female, age 85, both hemispheres
65.9
Dorsal cochlear nucleus nTPM: 92.4
2802
Male, age 74, right hemisphere
124.9
2187
Female, age 91, both hemispheres
92.3
2370
Male, age 61, both hemispheres
89.3
2378
Male, age 80, both hemispheres
80.0
2058
Male, age 76, both hemispheres
75.6
Dorsal tegmental nucleus nTPM: 96.9
2083
Male, age 80, both hemispheres
106.8
2326
Male, age 74, both hemispheres
102.4
2358
Male, age 61, both hemispheres
90.3
1936
Male, age 76, left hemisphere
87.9
Dorsolateral tegmental area nTPM: 91.2
2654
Male, age 80, both hemispheres
112.2
2751
Female, age 85, both hemispheres
106.2
2141
Male, age 76, both hemispheres
86.3
2360
Male, age 74, both hemispheres
82.5
2337
Male, age 61, both hemispheres
69.0
Kolliker-Fuse nucleus nTPM: 89.3
2163
Male, age 80, both hemispheres
112.4
2315
Male, age 76, right hemisphere
78.2
2793
Female, age 91, left hemisphere
77.4
Lateral lemniscal nuclei nTPM: 91.6
2169
Male, age 76, both hemispheres
114.8
2746
Female, age 85, left hemisphere
101.9
2453
Male, age 74, right hemisphere
98.0
2036
Male, age 80, both hemispheres
83.6
2320
Female, age 91, left hemisphere
59.9
Lateral parabrachial nucleus nTPM: 89.5
2139
Female, age 85, right hemisphere
112.0
2013
Male, age 80, both hemispheres
92.3
2790
Male, age 61, both hemispheres
86.0
2792
Male, age 76, both hemispheres
67.7
Lateral vestibular nucleus nTPM: 92.9
2184
Male, age 76, both hemispheres
99.7
2311
Male, age 80, both hemispheres
86.2
Locus coeruleus nTPM: 105.1
2720
Male, age 74, both hemispheres
137.1
2123
Female, age 91, both hemispheres
135.6
2014
Male, age 55, unknown
109.3
2788
Male, age 74, unknown
94.2
1980
Male, age 76, both hemispheres
88.8
2317
Female, age 72, unknown
86.1
2162
Male, age 80, both hemispheres
84.9
Medial parabrachial nucleus nTPM: 96.3
2170
Female, age 91, both hemispheres
117.5
2854
Male, age 80, both hemispheres
106.5
2786
Male, age 76, both hemispheres
88.7
2156
Male, age 61, both hemispheres
84.5
2463
Female, age 85, right hemisphere
84.4
Medial periolivary nuclei nTPM: 95.4
2171
Female, age 85, both hemispheres
120.9
2063
Male, age 76, both hemispheres
119.7
2791
Male, age 74, right hemisphere
107.2
2081
Male, age 80, both hemispheres
66.5
2458
Female, age 91, both hemispheres
62.6
Motor facial nucleus nTPM: 96.8
2062
Male, age 76, both hemispheres
127.0
2365
Male, age 74, right hemisphere
105.5
2697
Female, age 85, both hemispheres
93.2
2795
Female, age 91, both hemispheres
88.1
2126
Male, age 61, both hemispheres
86.7
2327
Male, age 80, both hemispheres
80.1
Motor trigeminal nucleus nTPM: 80.1
2309
Male, age 76, both hemispheres
97.7
2335
Male, age 61, both hemispheres
82.9
2079
Male, age 80, both hemispheres
80.9
2560
Male, age 74, both hemispheres
80.6
2321
Female, age 91, both hemispheres
58.3
Nuclei of the trapezoid body nTPM: 104.5
1983
Male, age 76, both hemispheres
138.5
2159
Male, age 61, both hemispheres
121.4
2735
Female, age 85, both hemispheres
118.7
2166
Male, age 80, both hemispheres
86.6
2368
Female, age 91, both hemispheres
57.3
Nucleus raphe magnus nTPM: 106.4
2160
Male, age 61, both hemispheres
156.4
2172
Female, age 85, both hemispheres
126.5
2455
Male, age 74, both hemispheres
112.1
2051
Male, age 76, both hemispheres
98.9
2328
Male, age 80, both hemispheres
81.0
2459
Female, age 91, both hemispheres
63.6
Paramedian reticular nucleus nTPM: 113.7
2050
Female, age 85, both hemispheres
135.8
2057
Male, age 80, both hemispheres
118.6
2313
Male, age 61, both hemispheres
109.9
2052
Male, age 76, both hemispheres
90.7
Pedunculopontine tegmental nucleus nTPM: 99.1
1921
Female, age 85, both hemispheres
100.7
2334
Male, age 80, both hemispheres
100.7
2338
Male, age 61, both hemispheres
95.9
Pontine nuclei nTPM: 110.0
1863
Male, age 55, unknown
158.8
2727
Male, age 61, right hemisphere
135.9
2787
Female, age 85, both hemispheres
133.6
2109
Female, age 72, unknown
126.3
1968
Male, age 76, left hemisphere
109.7
2454
Male, age 74, left hemisphere
85.2
2319
Female, age 91, both hemispheres
70.1
2115
Male, age 80, left hemisphere
60.7
Pontine raphe nucleus nTPM: 100.1
2122
Female, age 85, midline
110.8
2853
Male, age 76, midline
89.4
Posteroventral cochlear nucleus nTPM: 87.9
2752
Female, age 85, both hemispheres
124.4
2070
Male, age 76, both hemispheres
95.0
2341
Male, age 80, both hemispheres
81.3
2371
Male, age 61, both hemispheres
77.3
2135
Female, age 91, both hemispheres
61.6
Principal sensory trigeminal nucleus nTPM: 89.9
2158
Male, age 61, both hemispheres
115.6
2008
Male, age 80, left hemisphere
95.6
2324
Male, age 76, both hemispheres
87.4
2367
Female, age 91, left hemisphere
60.9
Reticular pontine nucleus, caudal nTPM: 89.4
2559
Male, age 74, both hemispheres
104.5
2092
Male, age 76, both hemispheres
100.1
2457
Female, age 91, both hemispheres
78.1
2332
Male, age 80, right hemisphere
74.8
Reticular pontine nucleus, oral nTPM: 96.3
1939
Male, age 80, both hemispheres
120.8
2012
Female, age 85, both hemispheres
116.6
2167
Male, age 76, both hemispheres
94.6
2361
Male, age 74, both hemispheres
76.4
2366
Female, age 91, both hemispheres
73.0
Reticulotegmental nucleus nTPM: 92.3
2452
Male, age 74, both hemispheres
105.9
2325
Male, age 76, both hemispheres
96.2
2322
Female, age 91, both hemispheres
86.4
2333
Male, age 80, both hemispheres
80.7
Spinal trigeminal nucleus, oral nTPM: 98.6
2737
Female, age 85, both hemispheres
115.3
2164
Male, age 80, both hemispheres
95.6
1978
Male, age 76, both hemispheres
84.8
Subcoeruleus area nTPM: 103.5
1958
Male, age 80, both hemispheres
126.2
2323
Female, age 91, left hemisphere
112.0
2451
Male, age 74, both hemispheres
102.2
2369
Female, age 85, left hemisphere
93.2
2089
Male, age 76, left hemisphere
84.0
Superior olive nTPM: 93.9
1875
Female, age 85, both hemispheres
145.3
2020
Male, age 76, both hemispheres
100.6
2364
Male, age 74, right hemisphere
86.8
2561
Female, age 91, both hemispheres
70.5
2329
Male, age 80, right hemisphere
66.0
Ventral periolivary nuclei nTPM: 97.4
2023
Male, age 76, both hemispheres
111.3
2165
Male, age 80, both hemispheres
111.3
2130
Female, age 85, both hemispheres
91.0
2794
Female, age 91, left hemisphere
75.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 88.2
2840
Female, age 85, both hemispheres
127.5
1959
Male, age 76, both hemispheres
108.8
2449
Male, age 74, both hemispheres
81.9
2161
Male, age 80, both hemispheres
81.8
2359
Male, age 61, both hemispheres
75.8
2456
Female, age 91, both hemispheres
53.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
