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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MST1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
154.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
684.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
540.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
510.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
480.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
461.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
407.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
396.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
390.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
380.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
379.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
369.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
346.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
345.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
341.5
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
340.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
338.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
335.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
331.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
325.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
323.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
307.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
305.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
303.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
303.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
301.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
295.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
294.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
292.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
287.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
287.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
284.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
284.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
283.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
281.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
280.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
280.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
278.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
277.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
275.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
271.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
269.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
268.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
268.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
266.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
265.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
264.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
262.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
259.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
254.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
253.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
249.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
248.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
247.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
245.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
245.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
240.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
239.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
237.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
234.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
234.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
233.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
231.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
229.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
229.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
228.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
228.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
227.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
227.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
225.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
224.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
222.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
222.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
222.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
221.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
218.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
217.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
216.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
212.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
211.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
208.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
207.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
207.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
207.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
206.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
204.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
204.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
204.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
203.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
203.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
202.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
202.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
202.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
200.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
198.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
198.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
198.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
196.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
196.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
195.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
195.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
194.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
194.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
193.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
193.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
193.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
193.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
191.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
190.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
190.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
189.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
189.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
186.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
186.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
186.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
185.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
184.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
184.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
184.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
184.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
183.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
183.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
182.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
182.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
182.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
181.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
181.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
181.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
181.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
180.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
180.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
180.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
179.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
179.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
177.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
177.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
176.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
176.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
174.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
173.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
172.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
170.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
169.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
169.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
168.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
168.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
167.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
167.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
167.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
167.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
166.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
165.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
165.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
164.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
163.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
163.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
163.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
162.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
162.1
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
161.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
158.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
158.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
157.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
157.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
156.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
156.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
155.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
153.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
153.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
152.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
151.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
150.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
149.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
149.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
149.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
148.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
148.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
147.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
146.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
146.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
146.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
145.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
144.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
144.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
144.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
144.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
142.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
141.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
141.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
141.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
141.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
140.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
139.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
139.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
139.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
138.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
136.3
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
135.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
135.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
135.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
134.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
134.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
133.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
131.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
131.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
131.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
130.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
130.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
129.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
128.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
127.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
125.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
125.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
124.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
124.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
123.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
122.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
122.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
121.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
121.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
121.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
120.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
119.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
119.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
119.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
119.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
118.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
117.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
116.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
116.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
116.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
116.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
115.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
114.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
113.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
112.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
112.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
111.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
108.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
108.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
107.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
106.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
106.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
106.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
104.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
104.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
102.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
99.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
99.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
98.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
97.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
96.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
95.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
95.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
95.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
94.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
94.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
93.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
93.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
93.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
93.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
92.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
92.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
92.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
90.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
90.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
90.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
87.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
86.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
86.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
85.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
85.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
84.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
84.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
83.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
83.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
83.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
83.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
82.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
80.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
80.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
79.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
79.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
77.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
76.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
76.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
75.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
74.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
73.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
72.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
72.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
70.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
70.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
70.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
69.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
68.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
65.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
64.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
63.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
62.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
62.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
60.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
59.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
58.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
58.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
58.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
57.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
55.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
55.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
55.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
53.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
53.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
52.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
51.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
51.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
50.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
50.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
49.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
48.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
47.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
47.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
44.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
43.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
43.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
41.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
41.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
39.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
39.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
38.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
37.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
33.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
33.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
30.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
30.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
30.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
29.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
28.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
26.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
25.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
23.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
18.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
18.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
16.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
14.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
6.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
6.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
5.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MST1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
122.4
Number of samples
231
Samples
Sample
Description
TPM
DO45241
0 years, male, NA, stage:1, alive, 1080 days
647.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
559.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
515.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
482.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
478.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
441.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
386.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
364.8
DO45149
0 years, female, NA, stage:2, alive, 1260 days
363.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
332.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
319.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
313.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
309.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
274.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
268.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
264.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
241.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
234.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
231.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
229.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
229.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
228.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
227.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
225.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
224.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
212.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
209.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
203.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
194.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
193.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
190.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
190.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
189.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
189.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
185.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
184.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
184.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
183.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
182.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
182.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
179.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
178.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
177.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
176.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
176.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
175.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
174.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
174.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
173.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
173.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
169.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
166.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
163.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
163.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
161.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
161.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
161.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
160.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
160.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
160.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
159.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
159.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
158.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
157.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
155.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
154.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
153.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
152.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
149.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
149.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
148.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
147.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
145.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
143.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
142.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
141.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
141.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
140.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
137.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
136.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
135.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
134.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
134.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
134.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
133.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
132.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
132.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
131.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
130.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
129.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
128.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
128.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
127.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
127.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
127.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
127.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
123.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
122.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
122.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
122.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
122.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
120.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
119.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
119.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
118.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
118.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
117.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
117.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
116.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
115.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
111.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
111.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
110.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
110.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
110.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
109.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
108.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
108.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
107.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
106.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
105.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
105.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
104.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
103.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
103.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
102.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
101.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
100.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
100.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
99.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
98.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
97.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
96.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
93.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
92.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
90.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
90.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
90.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
89.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
88.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
87.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
86.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
86.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
85.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
85.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
84.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
84.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
83.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
82.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
79.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
79.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
79.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
78.4
DO50850
0 years, male, NA, stage:3, alive, 720 days
77.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
76.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
74.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
69.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
68.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
68.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
66.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
64.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
64.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
62.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
61.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
61.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
58.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
58.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
58.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
58.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
56.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
56.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
55.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
53.4
DO48679
0 years, male, NA, stage:2, alive, 1200 days
52.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
49.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
49.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
49.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
49.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
48.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
48.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
47.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
44.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
43.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
43.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
42.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
40.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
40.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
40.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
39.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
38.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
36.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
36.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
36.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
34.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
32.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
32.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
32.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
30.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
27.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
25.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
24.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
24.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
22.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
22.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.5
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
20.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
16.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
13.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
5.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
3.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
2.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
2.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
285
Tumor
1.0
363
Tumor
0.9
937
Tumor
0.8
365
Tumor
0.8
877
Tumor
0.8
1015
Tumor
0.8
715
Tumor
0.7
921
Tumor
0.7
1025
Tumor
0.7
817
Tumor
0.6
523
Tumor
0.6
112
Tumor
0.5
141
Tumor
0.5
743
Tumor
0.5
452
Normal
0.5
218
Normal
0.5
342
Normal
0.5
983
Tumor
0.5
746
Normal
0.5
393
Tumor
0.5
113
Tumor
0.5
227
Tumor
0.5
815
Tumor
0.4
515
Tumor
0.4
471
Tumor
0.4
391
Tumor
0.4
455
Tumor
0.4
261
Tumor
0.4
124
Normal
0.4
185
Tumor
0.4
392
Normal
0.4
137
Tumor
0.4
517
Tumor
0.4
554
Normal
0.4
851
Tumor
0.3
473
Tumor
0.3
981
Tumor
0.3
952
Normal
0.3
186
Normal
0.3
217
Tumor
0.3
727
Tumor
0.3
951
Tumor
0.3
874
Normal
0.3
615
Tumor
0.3
967
Tumor
0.3
413
Tumor
0.3
557
Tumor
0.3
878
Normal
0.3
443
Tumor
0.3
138
Normal
0.3
975
Tumor
0.3
331
Tumor
0.3
568
Normal
0.3
737
Tumor
0.2
966
Normal
0.2
963
Tumor
0.2
755
Tumor
0.2
883
Tumor
0.2
223
Tumor
0.2
445
Tumor
0.2
924
Normal
0.2
387
Tumor
0.2
357
Tumor
0.2
538
Normal
0.2
474
Normal
0.2
344
Normal
0.2
518
Normal
0.2
142
Normal
0.2
192
Normal
0.2
785
Tumor
0.2
136
Normal
0.2
327
Tumor
0.2
114
Normal
0.2
436
Normal
0.2
1041
Tumor
0.2
697
Tumor
0.2
492
Normal
0.2
376
Normal
0.2
396
Normal
0.2
778
Normal
0.2
214
Normal
0.2
461
Tumor
0.1
386
Normal
0.1
777
Tumor
0.1
111
Normal
0.1
146
Normal
0.1
881
Tumor
0.1
914
Normal
0.1
358
Normal
0.1
421
Tumor
0.1
696
Normal
0.1
965
Tumor
0.1
451
Tumor
0.1
1026
Normal
0.1
412
Normal
0.1
728
Normal
0.1
483
Tumor
0.1
558
Normal
0.1
477
Tumor
0.1
222
Normal
0.1
915
Tumor
0.1
394
Normal
0.1
368
Normal
0.1
196
Normal
0.1
744
Normal
0.1
362
Normal
0.1
426
Normal
0.1
314
Normal
0.1
572
Normal
0.1
388
Normal
0.1
171
Tumor
0.1
366
Normal
0.1
1045
Tumor
0.1
456
Normal
0.0
738
Normal
0.0
411
Tumor
0.0
343
Tumor
0.0
816
Normal
0.0
564
Normal
0.0
232
Normal
0.0
148
Normal
0.0
423
Tumor
0.0
642
Normal
0.0
195
Tumor
0.0
574
Normal
0.0
286
Normal
0.0
516
Normal
0.0
161
Tumor
0.0
395
Tumor
0.0
332
Normal
0.0
228
Normal
0.0
271
Tumor
0.0
635
Tumor
0.0
823
Tumor
0.0
465
Tumor
0.0
278
Normal
0.0
466
Normal
0.0
162
Normal
0.0
662
Normal
0.0
172
Normal
0.0
448
Normal
0.0
128
Normal
0.0
298
Normal
0.0
126
Normal
0.0
546
Normal
0.0
742
Normal
0.0
131
Tumor
0.0
297
Tumor
0.0
636
Normal
0.0
911
Tumor
0.0
813
Tumor
0.0
258
Normal
0.0
145
Tumor
-0.1
312
Normal
-0.1
1028
Normal
-0.1
956
Normal
-0.1
434
Normal
-0.1
433
Tumor
-0.1
553
Tumor
-0.1
567
Tumor
-0.1
125
Tumor
-0.1
922
Normal
-0.1
132
Normal
-0.1
526
Normal
-0.1
666
Normal
-0.1
422
Normal
-0.1
367
Tumor
-0.1
955
Tumor
-0.1
863
Tumor
-0.1
355
Tumor
-0.1
435
Tumor
-0.1
1021
Tumor
-0.1
873
Tumor
-0.1
953
Tumor
-0.1
446
Normal
-0.1
147
Tumor
-0.1
1044
Normal
-0.1
618
Normal
-0.1
384
Normal
-0.1
257
Tumor
-0.1
354
Normal
-0.1
361
Tumor
-0.1
982
Normal
-0.1
535
Tumor
-0.1
491
Tumor
-0.1
444
Normal
-0.1
468
Normal
-0.1
695
Tumor
-0.1
536
Normal
-0.1
1022
Normal
-0.1
648
Normal
-0.2
494
Normal
-0.2
867
Tumor
-0.2
723
Tumor
-0.2
1043
Tumor
-0.2
341
Tumor
-0.2
698
Normal
-0.2
672
Normal
-0.2
268
Normal
-0.2
627
Tumor
-0.2
414
Normal
-0.2
462
Normal
-0.2
212
Normal
-0.2
857
Tumor
-0.2
364
Normal
-0.2
272
Normal
-0.2
375
Tumor
-0.2
352
Normal
-0.2
665
Tumor
-0.2
188
Normal
-0.2
685
Tumor
-0.2
858
Normal
-0.2
664
Normal
-0.2
221
Tumor
-0.2
686
Normal
-0.2
852
Normal
-0.2
537
Tumor
-0.2
284
Normal
-0.2
498
Normal
-0.2
1042
Normal
-0.2
745
Tumor
-0.2
262
Normal
-0.2
472
Normal
-0.2
862
Normal
-0.2
918
Normal
-0.2
818
Normal
-0.2
416
Normal
-0.3
187
Tumor
-0.3
267
Tumor
-0.3
916
Normal
-0.3
534
Normal
-0.3
882
Normal
-0.3
866
Normal
-0.3
277
Tumor
-0.3
353
Tumor
-0.3
864
Normal
-0.3
484
Normal
-0.3
1016
Normal
-0.3
824
Normal
-0.3
191
Tumor
-0.3
513
Tumor
-0.3
563
Tumor
-0.3
713
Tumor
-0.3
428
Normal
-0.3
968
Normal
-0.3
741
Tumor
-0.3
976
Normal
-0.3
671
Tumor
-0.3
385
Tumor
-0.3
432
Normal
-0.3
313
Tumor
-0.3
488
Normal
-0.3
224
Normal
-0.3
328
Normal
-0.3
617
Tumor
-0.3
977
Tumor
-0.3
447
Tumor
-0.3
923
Tumor
-0.3
533
Tumor
-0.3
123
Tumor
-0.4
356
Normal
-0.4
525
Tumor
-0.4
524
Normal
-0.4
528
Normal
-0.4
464
Normal
-0.4
661
Tumor
-0.4
231
Tumor
-0.4
415
Tumor
-0.4
424
Normal
-0.4
756
Normal
-0.4
1014
Normal
-0.4
957
Tumor
-0.4
1031
Tumor
-0.4
431
Tumor
-0.4
283
Tumor
-0.4
943
Tumor
-0.4
463
Tumor
-0.4
917
Tumor
-0.4
938
Normal
-0.4
984
Normal
-0.4
127
Tumor
-0.4
628
Normal
-0.4
913
Tumor
-0.4
868
Normal
-0.4
481
Tumor
-0.4
383
Tumor
-0.4
514
Normal
-0.4
351
Tumor
-0.5
647
Tumor
-0.5
716
Normal
-0.5
964
Normal
-0.5
487
Tumor
-0.5
926
Normal
-0.5
944
Normal
-0.5
425
Tumor
-0.5
482
Normal
-0.5
527
Tumor
-0.5
1032
Normal
-0.5
135
Tumor
-0.5
861
Tumor
-0.5
616
Normal
-0.6
545
Tumor
-0.6
958
Normal
-0.6
714
Normal
-0.6
467
Tumor
-0.6
978
Normal
-0.6
814
Normal
-0.6
786
Normal
-0.6
1046
Normal
-0.6
213
Tumor
-0.6
722
Normal
-0.6
311
Tumor
-0.6
1013
Tumor
-0.7
478
Normal
-0.7
721
Tumor
-0.7
912
Normal
-0.7
884
Normal
-0.7
493
Tumor
-0.7
497
Tumor
-0.7
954
Normal
-0.7
865
Tumor
-0.8
1027
Tumor
-0.8
925
Tumor
-0.8
663
Tumor
-0.9
427
Tumor
-0.9
211
Tumor
-0.9
641
Tumor
-1.0
724
Normal
-1.0
571
Tumor
-1.0
573
Tumor
-1.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.