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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R3B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
151.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
41.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
10.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.5
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
7.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
7.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
6.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
6.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
5.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
3.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
3.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
3.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
3.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
3.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
2.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
1.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R3B is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
98.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
80.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
79.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
79.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
79.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
79.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
77.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
73.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
71.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
68.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
68.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
67.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
66.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
66.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
66.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
64.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
63.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
63.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
62.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
62.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
62.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
60.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
60.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
60.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
59.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
56.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
56.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
55.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
55.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
54.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
54.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
54.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
53.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
53.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
53.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
53.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
53.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
53.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
53.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
52.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
52.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
52.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
52.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
52.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
51.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
51.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
50.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
50.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
49.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
49.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
49.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
48.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
47.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
46.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
46.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
46.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
46.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
46.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
45.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
45.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
45.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
44.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
44.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
44.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
44.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
43.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
43.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
43.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
43.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
43.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
43.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
43.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
42.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
42.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
42.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
42.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
41.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
41.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
41.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
41.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
41.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
40.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
40.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
40.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
39.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
39.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
39.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
39.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
38.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
38.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
38.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
38.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
38.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
37.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
36.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
36.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
35.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
35.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
35.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
35.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
35.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
35.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
35.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
35.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
34.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
34.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
34.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
34.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
34.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
34.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
33.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
33.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
33.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
32.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
32.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
32.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
32.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
32.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
32.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
32.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
32.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
32.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
31.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
31.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
30.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
30.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
29.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
29.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
29.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
29.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
29.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
28.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
28.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
28.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
28.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
27.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
27.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
27.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
26.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
26.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
26.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
26.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
25.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
25.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
25.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
25.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
25.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
25.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
25.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
24.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
24.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
24.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
23.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
23.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
23.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
23.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
23.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
23.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
23.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
22.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
22.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
22.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
22.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
22.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
22.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
21.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
21.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
20.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
19.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
19.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
18.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
18.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
18.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
18.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
18.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
18.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
17.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
17.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
17.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
17.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
17.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
16.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
16.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
16.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
15.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
15.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
15.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
15.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
15.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
15.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
14.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
13.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
13.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
12.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
12.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
12.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
11.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
11.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
11.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
11.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
10.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
9.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
9.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
8.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
7.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
6.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
5.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
5.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
4.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
3.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
2.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
2.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
1.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
0.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R3B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
162.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
160.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
116.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
89.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
73.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
72.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
70.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
69.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
69.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
68.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
65.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
64.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
62.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
61.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
60.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
58.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
53.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
52.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
50.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
49.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
48.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
45.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
43.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
43.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
42.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
42.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
41.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
40.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
39.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
38.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
38.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
38.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
36.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
35.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
34.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
31.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
30.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
30.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
29.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
29.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
29.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
24.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
23.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
22.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
22.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
20.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
12.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R3B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
76.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
74.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
61.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
53.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
52.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
48.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
44.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
42.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
37.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
35.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
35.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
34.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
27.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
25.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
23.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
21.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
20.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
19.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
18.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
17.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
17.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
14.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
14.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
14.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
14.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
13.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
12.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
11.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
11.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
10.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
10.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
10.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
10.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
9.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
9.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
9.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
8.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
8.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
8.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
8.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
8.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
8.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
8.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
7.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
7.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
7.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
6.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
6.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
6.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
6.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
6.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
6.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
6.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
6.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
6.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
5.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
5.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
5.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
5.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
5.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
5.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
5.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
4.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
4.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
4.3
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
4.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
4.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
3.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
3.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
3.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
3.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
3.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
3.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
3.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
3.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
3.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
3.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
3.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
3.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
3.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
2.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
2.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
2.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
2.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
2.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
2.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
1.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
1.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
1.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
