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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GOLGB1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
35.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
25.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
23.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
19.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
18.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
18.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
16.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
15.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
14.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
14.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
14.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
14.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
14.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
14.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
12.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
12.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
12.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
11.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
11.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
11.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
10.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
10.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
9.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
9.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
9.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
9.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
9.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
8.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
8.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
8.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
8.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
8.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
8.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
7.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
7.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
7.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
6.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
6.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
6.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
6.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
6.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
6.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
6.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
5.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
5.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
5.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
5.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
5.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
4.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
4.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
4.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
4.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
4.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
4.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
4.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
3.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
3.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
3.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
3.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
3.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
3.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GOLGB1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
231
Samples
Sample
Description
TPM
DO45237
0 years, male, NA, stage:2, alive, 900 days
33.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
29.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
27.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
27.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
27.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
27.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
26.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
26.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
25.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
24.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
24.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
23.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
23.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
23.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
23.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
21.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
20.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
20.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
20.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
19.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
19.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
19.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
19.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
19.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
18.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
18.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
18.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
17.9
DO45213
0 years, male, NA, stage:1, alive, 1200 days
17.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
17.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
17.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
16.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
16.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
16.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
16.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
16.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
16.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
15.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
15.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
15.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
15.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
15.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
15.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
15.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
15.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
14.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
14.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
14.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
14.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
14.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
14.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
13.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
13.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
13.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
13.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
13.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
12.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
12.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
11.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
11.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
10.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
10.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
9.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
9.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
8.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
7.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
7.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.5
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
5.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
2.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
1.1
937
Tumor
0.9
285
Tumor
0.8
724
Normal
0.8
545
Tumor
0.7
911
Tumor
0.6
327
Tumor
0.6
1041
Tumor
0.6
395
Tumor
0.6
525
Tumor
0.6
983
Tumor
0.6
917
Tumor
0.6
981
Tumor
0.5
497
Tumor
0.5
473
Tumor
0.5
1015
Tumor
0.5
685
Tumor
0.5
533
Tumor
0.5
713
Tumor
0.5
865
Tumor
0.5
1031
Tumor
0.5
447
Tumor
0.5
1021
Tumor
0.4
527
Tumor
0.4
567
Tumor
0.4
1027
Tumor
0.4
487
Tumor
0.4
223
Tumor
0.4
573
Tumor
0.4
351
Tumor
0.4
481
Tumor
0.4
537
Tumor
0.4
1025
Tumor
0.4
123
Tumor
0.4
953
Tumor
0.4
227
Tumor
0.4
536
Normal
0.4
617
Tumor
0.4
211
Tumor
0.4
451
Tumor
0.4
867
Tumor
0.4
383
Tumor
0.4
925
Tumor
0.4
427
Tumor
0.3
647
Tumor
0.3
697
Tumor
0.3
755
Tumor
0.3
526
Normal
0.3
524
Normal
0.3
861
Tumor
0.3
477
Tumor
0.3
665
Tumor
0.3
391
Tumor
0.3
493
Tumor
0.3
1013
Tumor
0.3
951
Tumor
0.3
553
Tumor
0.3
514
Normal
0.3
923
Tumor
0.3
741
Tumor
0.3
883
Tumor
0.3
523
Tumor
0.3
212
Normal
0.3
977
Tumor
0.3
171
Tumor
0.3
355
Tumor
0.2
261
Tumor
0.2
943
Tumor
0.2
745
Tumor
0.2
968
Normal
0.2
916
Normal
0.2
471
Tumor
0.2
915
Tumor
0.2
727
Tumor
0.2
957
Tumor
0.2
851
Tumor
0.2
415
Tumor
0.2
958
Normal
0.2
518
Normal
0.2
868
Normal
0.2
823
Tumor
0.2
913
Tumor
0.2
873
Tumor
0.2
478
Normal
0.2
311
Tumor
0.2
125
Tumor
0.2
221
Tumor
0.2
482
Normal
0.2
955
Tumor
0.2
852
Normal
0.2
918
Normal
0.2
535
Tumor
0.2
492
Normal
0.2
494
Normal
0.2
921
Tumor
0.2
393
Tumor
0.2
491
Tumor
0.2
967
Tumor
0.2
515
Tumor
0.2
978
Normal
0.2
517
Tumor
0.2
715
Tumor
0.1
284
Normal
0.1
411
Tumor
0.1
474
Normal
0.1
461
Tumor
0.1
696
Normal
0.1
1028
Normal
0.1
413
Tumor
0.1
257
Tumor
0.1
283
Tumor
0.1
1014
Normal
0.1
528
Normal
0.1
743
Tumor
0.1
778
Normal
0.1
964
Normal
0.1
926
Normal
0.1
228
Normal
0.1
558
Normal
0.1
443
Tumor
0.1
516
Normal
0.1
728
Normal
0.1
448
Normal
0.1
113
Tumor
0.1
145
Tumor
0.1
483
Tumor
0.1
141
Tumor
0.1
328
Normal
0.1
922
Normal
0.1
786
Normal
0.1
982
Normal
0.1
722
Normal
0.1
534
Normal
0.1
984
Normal
0.1
463
Tumor
0.1
956
Normal
0.1
738
Normal
0.1
857
Tumor
0.1
412
Normal
0.1
756
Normal
0.1
966
Normal
0.1
641
Tumor
0.1
286
Normal
0.1
723
Tumor
0.1
1044
Normal
0.1
231
Tumor
0.1
938
Normal
0.1
554
Normal
0.1
131
Tumor
0.1
462
Normal
0.1
271
Tumor
0.1
356
Normal
0.1
147
Tumor
0.1
1043
Tumor
0.1
498
Normal
0.1
195
Tumor
0.1
368
Normal
0.1
976
Normal
0.1
817
Tumor
0.1
1042
Normal
0.1
813
Tumor
0.1
353
Tumor
0.1
1032
Normal
0.1
268
Normal
0.1
924
Normal
0.0
484
Normal
0.0
952
Normal
0.0
864
Normal
0.0
331
Tumor
0.0
472
Normal
0.0
546
Normal
0.0
714
Normal
0.0
488
Normal
0.0
963
Tumor
0.0
721
Tumor
0.0
686
Normal
0.0
538
Normal
0.0
1026
Normal
0.0
513
Tumor
0.0
661
Tumor
0.0
218
Normal
0.0
572
Normal
0.0
416
Normal
0.0
224
Normal
0.0
944
Normal
0.0
858
Normal
0.0
232
Normal
0.0
912
Normal
0.0
954
Normal
0.0
262
Normal
0.0
361
Tumor
0.0
884
Normal
0.0
874
Normal
0.0
636
Normal
0.0
1016
Normal
0.0
375
Tumor
0.0
816
Normal
0.0
444
Normal
0.0
663
Tumor
0.0
882
Normal
0.0
862
Normal
0.0
364
Normal
0.0
814
Normal
0.0
716
Normal
0.0
1022
Normal
0.0
1045
Tumor
0.0
142
Normal
0.0
435
Tumor
0.0
975
Tumor
0.0
824
Normal
0.0
341
Tumor
0.0
914
Normal
0.0
866
Normal
0.0
878
Normal
0.0
785
Tumor
0.0
1046
Normal
0.0
188
Normal
0.0
191
Tumor
-0.1
695
Tumor
-0.1
332
Normal
-0.1
881
Tumor
-0.1
384
Normal
-0.1
563
Tumor
-0.1
136
Normal
-0.1
367
Tumor
-0.1
434
Normal
-0.1
564
Normal
-0.1
421
Tumor
-0.1
387
Tumor
-0.1
297
Tumor
-0.1
746
Normal
-0.1
422
Normal
-0.1
742
Normal
-0.1
777
Tumor
-0.1
737
Tumor
-0.1
363
Tumor
-0.1
662
Normal
-0.1
698
Normal
-0.1
214
Normal
-0.1
392
Normal
-0.1
557
Tumor
-0.1
187
Tumor
-0.1
863
Tumor
-0.1
161
Tumor
-0.1
258
Normal
-0.1
385
Tumor
-0.1
124
Normal
-0.1
616
Normal
-0.1
217
Tumor
-0.1
433
Tumor
-0.1
568
Normal
-0.1
574
Normal
-0.1
137
Tumor
-0.1
428
Normal
-0.1
126
Normal
-0.1
467
Tumor
-0.1
648
Normal
-0.1
162
Normal
-0.1
314
Normal
-0.1
414
Normal
-0.1
267
Tumor
-0.1
272
Normal
-0.1
666
Normal
-0.1
344
Normal
-0.1
192
Normal
-0.1
362
Normal
-0.1
468
Normal
-0.1
376
Normal
-0.1
571
Tumor
-0.1
628
Normal
-0.1
672
Normal
-0.1
464
Normal
-0.1
357
Tumor
-0.1
386
Normal
-0.1
396
Normal
-0.1
138
Normal
-0.1
114
Normal
-0.1
815
Tumor
-0.2
148
Normal
-0.2
642
Normal
-0.2
446
Normal
-0.2
312
Normal
-0.2
185
Tumor
-0.2
424
Normal
-0.2
186
Normal
-0.2
426
Normal
-0.2
664
Normal
-0.2
394
Normal
-0.2
222
Normal
-0.2
146
Normal
-0.2
278
Normal
-0.2
172
Normal
-0.2
818
Normal
-0.2
111
Normal
-0.2
456
Normal
-0.2
452
Normal
-0.2
432
Normal
-0.2
277
Tumor
-0.2
466
Normal
-0.2
196
Normal
-0.2
388
Normal
-0.2
352
Normal
-0.2
127
Tumor
-0.2
431
Tumor
-0.2
132
Normal
-0.2
358
Normal
-0.2
313
Tumor
-0.2
436
Normal
-0.2
213
Tumor
-0.2
128
Normal
-0.2
618
Normal
-0.2
354
Normal
-0.3
366
Normal
-0.3
365
Tumor
-0.3
615
Tumor
-0.3
298
Normal
-0.3
112
Tumor
-0.3
343
Tumor
-0.3
877
Tumor
-0.3
744
Normal
-0.3
627
Tumor
-0.3
423
Tumor
-0.3
465
Tumor
-0.3
445
Tumor
-0.3
342
Normal
-0.4
455
Tumor
-0.4
425
Tumor
-0.4
135
Tumor
-0.4
671
Tumor
-0.6
635
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
