HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:9.3 nTPM
HPA Brain:27.5 nTPM
GTEx:9.3 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:21.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035770
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 27.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
2148 Female, age 91, left hemisphere 28.2
1898 Male, age 80, left hemisphere 25.0
1855 Male, age 76, left hemisphere 24.1
2621 Female, age 67, right hemisphere 23.5
2529 Female, age 94, left hemisphere 21.9
1911 Female, age 85, right hemisphere 20.4
Dentate gyrus
nTPM: 24.6
1927 Female, age 91, both hemispheres 29.8
2531 Female, age 67, both hemispheres 29.7
2010 Male, age 76, both hemispheres 24.2
2528 Male, age 74, both hemispheres 22.9
2246 Female, age 85, both hemispheres 21.1
2530 Female, age 94, left hemisphere 20.0
Entorhinal gyrus
nTPM: 21.4
1787 Male, age 76, left hemisphere 22.7
2613 Female, age 94, left hemisphere 22.2
2764 Male, age 80, right hemisphere 21.7
2117 Female, age 91, right hemisphere 21.1
1938 Female, age 85, left hemisphere 20.7
2686 Male, age 75, right hemisphere 20.1
Hippocampus, CA1
nTPM: 27.5
2749 Male, age 80, left hemisphere 34.1
2045 Male, age 76, both hemispheres 32.2
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 22.9
2082 Female, age 91, right hemisphere 19.4
Hippocampus, CA2
nTPM: 22.3
1963 Male, age 80, left hemisphere 28.4
1892 Male, age 76, both hemispheres 26.3
2437 Female, age 94, left hemisphere 21.3
2249 Male, age 74, both hemispheres 20.2
2113 Female, age 91, right hemisphere 18.9
1940 Female, age 85, left hemisphere 18.7
Hippocampus, CA3
nTPM: 27.1
2861 Female, age 67, both hemispheres 31.5
2620 Female, age 94, left hemisphere 30.8
1867 Male, age 76, both hemispheres 27.7
2137 Male, age 80, left hemisphere 26.4
2436 Male, age 74, both hemispheres 24.7
1891 Female, age 85, both hemispheres 21.7
Parahippocampal cortex
nTPM: 20.7
2245 Female, age 91, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.0
2622 Female, age 67, right hemisphere 21.0
1850 Male, age 80, both hemispheres 20.9
2692 Male, age 74, both hemispheres 20.9
2250 Female, age 67, right hemisphere 20.1
1990 Female, age 91, right hemisphere 19.7
2693 Female, age 94, both hemispheres 19.7
2018 Male, age 76, both hemispheres 19.6
2532 Female, age 72, left hemisphere 19.6
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 24.7
1794 Male, age 80, right hemisphere 23.6
2521 Female, age 94, right hemisphere 22.6
1841 Female, age 85, right hemisphere 21.3
2848 Male, age 76, right hemisphere 19.0
Subiculum
nTPM: 21.7
2729 Female, age 91, right hemisphere 22.8
2438 Female, age 94, left hemisphere 22.7
1901 Male, age 80, both hemispheres 22.4
1977 Female, age 85, both hemispheres 21.2
2619 Male, age 74, both hemispheres 20.7
2042 Male, age 76, both hemispheres 20.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 18.7
Min nTPM: 5.7
Std nTPM: 2.1
Median nTPM: 8.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 15.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 14.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 14.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 14.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 14.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 13.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 13.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 13.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 16.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.2
Pig sample Sample description nTPM
Subiculum
nTPM: 10.4
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.8
Sample A Female 11.8
Sample B Female 10.0
Sample C Male 10.1
Sample D Male 9.8
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.6
Sample A Female 11.9
Sample B Female 11.6
Sample C Male 10.3
Sample D Male 9.6
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.6
Sample A Female 10.9
Sample B Female 9.7
Sample C Male 11.2
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.5
Sample A Female 10.6
Sample B Female 9.5
Sample C Male 13.3
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.7
Sample A Male 17.4
Sample B Male 17.9
Sample C Female 16.7
Sample D Female 19.1
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.0
Sample A Male 19.6
Sample B Male 23.6
Sample C Female 22.9
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70295918 Antisense, RP_050531_04_C07, Mouse strain C57BL/6J (56 days, male) 2.1
71213665 Antisense, RP_050816_04_D03, Mouse strain C57BL/6J (56 days, male) 1.5

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