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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF8 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
49.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
45.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
25.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
24.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
22.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
19.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
16.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
16.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
15.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
15.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
15.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
14.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
14.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
14.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
13.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
13.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
13.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.1
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
13.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
12.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
12.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
11.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
11.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
10.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
9.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
9.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
9.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
9.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
8.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
8.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
8.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
8.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
8.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
8.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
7.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
7.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
7.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
6.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
6.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
6.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
6.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
5.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
5.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
5.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
5.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
5.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
5.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
5.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
5.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
5.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
4.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
4.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
4.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
4.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
4.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
4.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
4.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
4.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
4.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
4.1
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
4.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
4.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
4.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
3.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
3.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
3.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
3.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
3.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
3.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
3.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
2.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
2.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
2.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
2.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
2.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
1.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHF8 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.4
Number of samples
231
Samples
Sample
Description
TPM
DO45171
0 years, male, NA, stage:3, alive, 600 days
53.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
52.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
37.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
32.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
31.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
29.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
29.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
28.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
28.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
27.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
27.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
26.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
24.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
24.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
23.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
23.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
22.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
21.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
21.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
21.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
20.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
19.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
19.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
18.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
18.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
18.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
17.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
17.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
17.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
17.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
17.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
16.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
15.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
15.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
15.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
15.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
15.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
15.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
14.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
14.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
14.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
14.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
14.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
13.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
13.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
12.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
12.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
12.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
10.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
10.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
10.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
9.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
9.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
9.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.7
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
9.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
8.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
8.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
8.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
8.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
7.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
7.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
6.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.3
DO45223
0 years, male, NA, stage:4, alive, 1020 days
6.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
6.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
5.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
5.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
5.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
5.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
5.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
5.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
5.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
5.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
4.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
4.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
4.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
4.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
4.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
3.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
3.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
3.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
2.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
2.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
2.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
171
Tumor
1.7
411
Tumor
1.0
112
Tumor
1.0
557
Tumor
0.9
685
Tumor
0.9
231
Tumor
0.8
1013
Tumor
0.8
647
Tumor
0.8
977
Tumor
0.8
341
Tumor
0.7
1031
Tumor
0.7
351
Tumor
0.7
963
Tumor
0.7
473
Tumor
0.6
815
Tumor
0.6
965
Tumor
0.6
715
Tumor
0.6
425
Tumor
0.6
661
Tumor
0.6
883
Tumor
0.6
665
Tumor
0.6
1041
Tumor
0.6
227
Tumor
0.5
695
Tumor
0.5
221
Tumor
0.5
357
Tumor
0.5
413
Tumor
0.5
785
Tumor
0.5
355
Tumor
0.5
724
Normal
0.4
741
Tumor
0.4
332
Normal
0.4
487
Tumor
0.4
537
Tumor
0.4
861
Tumor
0.4
951
Tumor
0.4
671
Tumor
0.4
385
Tumor
0.4
967
Tumor
0.4
824
Normal
0.4
391
Tumor
0.4
1021
Tumor
0.4
953
Tumor
0.4
431
Tumor
0.4
937
Tumor
0.4
196
Normal
0.4
954
Normal
0.3
915
Tumor
0.3
984
Normal
0.3
217
Tumor
0.3
983
Tumor
0.3
1044
Normal
0.3
517
Tumor
0.3
161
Tumor
0.3
981
Tumor
0.3
463
Tumor
0.3
912
Normal
0.3
123
Tumor
0.3
367
Tumor
0.3
271
Tumor
0.3
858
Normal
0.3
1046
Normal
0.3
445
Tumor
0.3
451
Tumor
0.3
698
Normal
0.3
538
Normal
0.3
192
Normal
0.3
727
Tumor
0.3
818
Normal
0.3
185
Tumor
0.3
298
Normal
0.3
816
Normal
0.3
127
Tumor
0.3
524
Normal
0.2
344
Normal
0.2
921
Tumor
0.2
867
Tumor
0.2
884
Normal
0.2
142
Normal
0.2
1015
Tumor
0.2
277
Tumor
0.2
635
Tumor
0.2
978
Normal
0.2
267
Tumor
0.2
314
Normal
0.2
415
Tumor
0.2
744
Normal
0.2
813
Tumor
0.2
1014
Normal
0.2
924
Normal
0.2
553
Tumor
0.2
881
Tumor
0.2
672
Normal
0.2
865
Tumor
0.2
261
Tumor
0.2
636
Normal
0.2
571
Tumor
0.2
1043
Tumor
0.2
567
Tumor
0.2
448
Normal
0.2
975
Tumor
0.2
435
Tumor
0.2
471
Tumor
0.2
427
Tumor
0.2
447
Tumor
0.2
146
Normal
0.2
443
Tumor
0.2
353
Tumor
0.2
433
Tumor
0.2
686
Normal
0.2
363
Tumor
0.2
488
Normal
0.2
224
Normal
0.2
913
Tumor
0.1
696
Normal
0.1
722
Normal
0.1
877
Tumor
0.1
285
Tumor
0.1
444
Normal
0.1
944
Normal
0.1
342
Normal
0.1
911
Tumor
0.1
172
Normal
0.1
113
Tumor
0.1
864
Normal
0.1
716
Normal
0.1
132
Normal
0.1
131
Tumor
0.1
923
Tumor
0.1
615
Tumor
0.1
873
Tumor
0.1
327
Tumor
0.1
641
Tumor
0.1
852
Normal
0.1
536
Normal
0.1
851
Tumor
0.1
368
Normal
0.1
395
Tumor
0.1
477
Tumor
0.1
452
Normal
0.1
218
Normal
0.1
714
Normal
0.1
616
Normal
0.1
663
Tumor
0.1
191
Tumor
0.1
481
Tumor
0.1
195
Tumor
0.0
1025
Tumor
0.0
232
Normal
0.0
976
Normal
0.0
467
Tumor
0.0
866
Normal
0.0
868
Normal
0.0
352
Normal
0.0
862
Normal
0.0
498
Normal
0.0
878
Normal
0.0
468
Normal
0.0
213
Tumor
0.0
964
Normal
0.0
466
Normal
0.0
982
Normal
0.0
284
Normal
0.0
148
Normal
0.0
313
Tumor
0.0
572
Normal
0.0
546
Normal
0.0
483
Tumor
0.0
918
Normal
0.0
138
Normal
0.0
392
Normal
0.0
465
Tumor
0.0
186
Normal
0.0
136
Normal
0.0
957
Tumor
0.0
361
Tumor
0.0
664
Normal
0.0
642
Normal
0.0
563
Tumor
0.0
383
Tumor
0.0
534
Normal
0.0
721
Tumor
0.0
462
Normal
0.0
124
Normal
0.0
662
Normal
0.0
574
Normal
0.0
922
Normal
0.0
817
Tumor
0.0
823
Tumor
0.0
943
Tumor
0.0
814
Normal
0.0
917
Tumor
0.0
737
Tumor
0.0
464
Normal
0.0
1032
Normal
0.0
493
Tumor
0.0
434
Normal
0.0
1016
Normal
0.0
145
Tumor
0.0
1026
Normal
0.0
966
Normal
0.0
857
Tumor
0.0
446
Normal
0.0
421
Tumor
0.0
568
Normal
0.0
558
Normal
0.0
396
Normal
0.0
777
Tumor
0.0
388
Normal
0.0
516
Normal
0.0
222
Normal
0.0
713
Tumor
0.0
456
Normal
0.0
376
Normal
0.0
628
Normal
0.0
958
Normal
0.0
514
Normal
0.0
1045
Tumor
0.0
384
Normal
-0.1
286
Normal
-0.1
533
Tumor
-0.1
211
Tumor
-0.1
1028
Normal
-0.1
214
Normal
-0.1
925
Tumor
-0.1
461
Tumor
-0.1
573
Tumor
-0.1
755
Tumor
-0.1
526
Normal
-0.1
393
Tumor
-0.1
422
Normal
-0.1
331
Tumor
-0.1
312
Normal
-0.1
412
Normal
-0.1
126
Normal
-0.1
354
Normal
-0.1
482
Normal
-0.1
474
Normal
-0.1
554
Normal
-0.1
545
Tumor
-0.1
128
Normal
-0.1
968
Normal
-0.1
926
Normal
-0.1
268
Normal
-0.1
356
Normal
-0.1
1042
Normal
-0.1
494
Normal
-0.1
492
Normal
-0.1
1022
Normal
-0.1
525
Tumor
-0.1
952
Normal
-0.1
423
Tumor
-0.1
358
Normal
-0.1
162
Normal
-0.1
484
Normal
-0.1
618
Normal
-0.1
564
Normal
-0.1
328
Normal
-0.1
497
Tumor
-0.1
228
Normal
-0.1
187
Tumor
-0.1
428
Normal
-0.1
697
Tumor
-0.1
387
Tumor
-0.1
513
Tumor
-0.1
617
Tumor
-0.1
648
Normal
-0.1
955
Tumor
-0.1
125
Tumor
-0.1
742
Normal
-0.1
386
Normal
-0.1
666
Normal
-0.1
394
Normal
-0.2
956
Normal
-0.2
882
Normal
-0.2
188
Normal
-0.2
262
Normal
-0.2
343
Tumor
-0.2
863
Tumor
-0.2
272
Normal
-0.2
432
Normal
-0.2
916
Normal
-0.2
426
Normal
-0.2
212
Normal
-0.2
746
Normal
-0.2
416
Normal
-0.2
723
Tumor
-0.2
518
Normal
-0.2
478
Normal
-0.2
111
Normal
-0.2
311
Tumor
-0.2
874
Normal
-0.2
114
Normal
-0.2
258
Normal
-0.2
455
Tumor
-0.2
362
Normal
-0.2
366
Normal
-0.2
147
Tumor
-0.2
523
Tumor
-0.2
257
Tumor
-0.2
743
Tumor
-0.2
375
Tumor
-0.2
414
Normal
-0.2
938
Normal
-0.3
365
Tumor
-0.3
627
Tumor
-0.3
914
Normal
-0.3
424
Normal
-0.3
491
Tumor
-0.3
472
Normal
-0.3
364
Normal
-0.3
528
Normal
-0.3
436
Normal
-0.3
297
Tumor
-0.3
728
Normal
-0.3
778
Normal
-0.3
141
Tumor
-0.3
738
Normal
-0.3
1027
Tumor
-0.3
283
Tumor
-0.4
527
Tumor
-0.4
137
Tumor
-0.4
278
Normal
-0.4
135
Tumor
-0.4
223
Tumor
-0.4
515
Tumor
-0.4
535
Tumor
-0.5
756
Normal
-0.5
786
Normal
-0.6
745
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
