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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM134 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
50.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
44.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
44.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
44.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
39.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
37.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
36.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
34.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
34.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
33.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
33.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
33.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
32.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
32.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
31.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
30.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
29.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
29.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
29.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
29.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
29.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
29.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
28.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
28.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
28.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
27.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
27.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
27.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
27.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
27.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
27.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
27.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
27.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
27.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
27.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
27.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
27.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
26.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
26.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
26.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
26.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
26.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
25.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
25.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
25.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
25.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
25.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
24.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
24.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
24.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
24.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
24.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
24.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
24.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
24.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
24.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
23.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
23.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
23.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
23.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
23.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
23.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
23.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
23.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
23.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
23.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
22.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
22.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
22.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
22.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
21.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
21.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
21.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
21.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
21.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
21.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
21.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
21.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
21.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
20.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
20.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
20.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
20.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
20.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
20.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
20.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
20.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
20.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
19.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
19.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
19.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
19.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
19.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
19.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
19.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
19.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
19.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
19.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
18.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
18.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
18.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
18.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
18.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
18.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
18.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
18.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
18.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
17.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
17.8
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
17.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
17.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
17.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
17.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
17.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
17.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
17.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
17.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
17.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
17.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
17.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
16.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
16.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
16.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
16.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
16.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
16.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
16.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
15.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
15.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
15.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
15.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
15.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
15.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
15.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
15.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
15.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
15.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
14.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
14.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
14.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
14.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
14.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
14.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
14.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
13.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
13.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
13.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
13.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
13.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
13.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
13.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
13.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
13.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
13.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
13.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
13.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
13.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
13.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
13.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
12.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.5
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
12.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
12.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
12.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
12.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
12.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
12.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
11.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
11.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
11.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
11.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
11.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
11.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
11.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
11.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
11.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
11.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
11.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
10.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
10.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
10.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
10.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
10.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
10.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
10.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
9.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
9.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
8.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
8.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.4
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
8.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
7.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
7.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
7.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
7.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
6.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM134 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.4
Number of samples
231
Samples
Sample
Description
TPM
DO45191
0 years, female, NA, stage:2, alive, 1200 days
115.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
86.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
85.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
79.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
79.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
68.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
66.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
57.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
49.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
44.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
43.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
41.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
41.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
40.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
40.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
39.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
39.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
39.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
39.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
38.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
37.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
37.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
37.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
37.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
36.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
36.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
36.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
35.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
34.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
34.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
34.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
34.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
33.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
33.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
32.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
32.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
32.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
31.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
31.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
31.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
31.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
31.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
30.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
30.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
30.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
29.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
28.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
28.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
28.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
28.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
27.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
27.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
27.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
27.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
26.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
26.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
26.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
26.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
26.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
26.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
26.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
26.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
26.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
26.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
25.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
25.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
25.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
24.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
24.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
24.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
24.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
24.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
24.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
24.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
24.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
23.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
23.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
23.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
23.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
23.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
23.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
23.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
23.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
22.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
22.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
22.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
22.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
21.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
21.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
21.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
21.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
21.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
21.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
21.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
21.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
21.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
21.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
21.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
20.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
20.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
20.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
20.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
20.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
19.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
19.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
19.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
19.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
19.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
19.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
19.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
19.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
18.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
18.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
18.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
18.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
18.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
17.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
17.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
17.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
17.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
17.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
17.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
16.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
16.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
16.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
16.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
16.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
16.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
16.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
15.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
15.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
15.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
15.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
15.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
15.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
14.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
13.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
13.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
13.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
13.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
13.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
11.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
9.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
7.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
6.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
6.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
6.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
5.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
112
Tumor
2.6
873
Tumor
2.3
883
Tumor
1.4
527
Tumor
0.9
741
Tumor
0.9
135
Tumor
0.8
557
Tumor
0.8
863
Tumor
0.8
191
Tumor
0.7
636
Normal
0.7
628
Normal
0.6
564
Normal
0.6
368
Normal
0.6
618
Normal
0.6
647
Tumor
0.5
195
Tumor
0.5
721
Tumor
0.5
627
Tumor
0.5
385
Tumor
0.5
911
Tumor
0.5
558
Normal
0.5
738
Normal
0.5
162
Normal
0.5
722
Normal
0.5
884
Normal
0.5
513
Tumor
0.5
635
Tumor
0.5
1027
Tumor
0.5
272
Normal
0.5
642
Normal
0.4
1028
Normal
0.4
728
Normal
0.4
648
Normal
0.4
813
Tumor
0.4
443
Tumor
0.4
944
Normal
0.4
938
Normal
0.4
641
Tumor
0.4
662
Normal
0.4
745
Tumor
0.4
361
Tumor
0.4
387
Tumor
0.4
921
Tumor
0.4
257
Tumor
0.4
881
Tumor
0.4
616
Normal
0.4
514
Normal
0.4
277
Tumor
0.4
515
Tumor
0.4
142
Normal
0.4
981
Tumor
0.4
258
Normal
0.4
913
Tumor
0.4
984
Normal
0.4
278
Normal
0.4
672
Normal
0.4
857
Tumor
0.4
737
Tumor
0.4
366
Normal
0.4
814
Normal
0.3
572
Normal
0.3
396
Normal
0.3
365
Tumor
0.3
954
Normal
0.3
868
Normal
0.3
864
Normal
0.3
186
Normal
0.3
563
Tumor
0.3
816
Normal
0.3
452
Normal
0.3
312
Normal
0.3
778
Normal
0.3
138
Normal
0.3
526
Normal
0.3
878
Normal
0.3
723
Tumor
0.3
568
Normal
0.3
742
Normal
0.3
955
Tumor
0.3
148
Normal
0.3
574
Normal
0.3
388
Normal
0.3
553
Tumor
0.3
866
Normal
0.3
421
Tumor
0.3
777
Tumor
0.3
686
Normal
0.3
858
Normal
0.3
332
Normal
0.3
353
Tumor
0.3
664
Normal
0.3
666
Normal
0.2
172
Normal
0.2
914
Normal
0.2
1015
Tumor
0.2
925
Tumor
0.2
755
Tumor
0.2
362
Normal
0.2
468
Normal
0.2
824
Normal
0.2
867
Tumor
0.2
352
Normal
0.2
554
Normal
0.2
446
Normal
0.2
912
Normal
0.2
744
Normal
0.2
136
Normal
0.2
727
Tumor
0.2
617
Tumor
0.2
126
Normal
0.2
1032
Normal
0.2
214
Normal
0.2
852
Normal
0.2
546
Normal
0.2
384
Normal
0.2
344
Normal
0.2
422
Normal
0.2
354
Normal
0.2
756
Normal
0.2
922
Normal
0.2
394
Normal
0.2
298
Normal
0.2
262
Normal
0.2
882
Normal
0.2
392
Normal
0.2
862
Normal
0.1
393
Tumor
0.1
125
Tumor
0.1
818
Normal
0.1
221
Tumor
0.1
518
Normal
0.1
516
Normal
0.1
786
Normal
0.1
358
Normal
0.1
524
Normal
0.1
952
Normal
0.1
341
Tumor
0.1
436
Normal
0.1
222
Normal
0.1
463
Tumor
0.1
538
Normal
0.1
714
Normal
0.1
956
Normal
0.1
428
Normal
0.1
376
Normal
0.1
395
Tumor
0.1
696
Normal
0.1
444
Normal
0.1
268
Normal
0.1
917
Tumor
0.1
431
Tumor
0.1
665
Tumor
0.1
746
Normal
0.1
297
Tumor
0.1
386
Normal
0.1
1014
Normal
0.1
528
Normal
0.1
978
Normal
0.1
937
Tumor
0.1
877
Tumor
0.1
427
Tumor
0.1
1042
Normal
0.1
132
Normal
0.1
1016
Normal
0.1
314
Normal
0.0
1041
Tumor
0.0
124
Normal
0.0
128
Normal
0.0
146
Normal
0.0
982
Normal
0.0
435
Tumor
0.0
615
Tumor
0.0
327
Tumor
0.0
342
Normal
0.0
874
Normal
0.0
426
Normal
0.0
464
Normal
0.0
1026
Normal
0.0
465
Tumor
0.0
114
Normal
0.0
716
Normal
0.0
414
Normal
0.0
232
Normal
0.0
861
Tumor
0.0
1022
Normal
0.0
356
Normal
0.0
415
Tumor
0.0
271
Tumor
0.0
424
Normal
0.0
267
Tumor
0.0
363
Tumor
0.0
111
Normal
0.0
261
Tumor
-0.1
434
Normal
-0.1
196
Normal
-0.1
916
Normal
-0.1
391
Tumor
-0.1
977
Tumor
-0.1
918
Normal
-0.1
533
Tumor
-0.1
466
Normal
-0.1
218
Normal
-0.1
715
Tumor
-0.1
1031
Tumor
-0.1
192
Normal
-0.1
413
Tumor
-0.1
823
Tumor
-0.1
217
Tumor
-0.1
926
Normal
-0.1
328
Normal
-0.1
968
Normal
-0.1
432
Normal
-0.1
145
Tumor
-0.1
213
Tumor
-0.2
713
Tumor
-0.2
785
Tumor
-0.2
331
Tumor
-0.2
983
Tumor
-0.2
571
Tumor
-0.2
534
Normal
-0.2
161
Tumor
-0.2
423
Tumor
-0.2
367
Tumor
-0.2
456
Normal
-0.2
1025
Tumor
-0.2
137
Tumor
-0.2
357
Tumor
-0.2
685
Tumor
-0.2
865
Tumor
-0.2
451
Tumor
-0.2
573
Tumor
-0.2
815
Tumor
-0.2
412
Normal
-0.2
467
Tumor
-0.2
383
Tumor
-0.2
976
Normal
-0.3
364
Normal
-0.3
663
Tumor
-0.3
311
Tumor
-0.3
433
Tumor
-0.3
567
Tumor
-0.3
147
Tumor
-0.3
313
Tumor
-0.3
695
Tumor
-0.3
1021
Tumor
-0.3
141
Tumor
-0.3
127
Tumor
-0.3
964
Normal
-0.3
188
Normal
-0.4
958
Normal
-0.4
953
Tumor
-0.4
817
Tumor
-0.4
966
Normal
-0.4
523
Tumor
-0.4
943
Tumor
-0.4
231
Tumor
-0.4
851
Tumor
-0.5
425
Tumor
-0.5
445
Tumor
-0.5
123
Tumor
-0.5
455
Tumor
-0.5
661
Tumor
-0.5
113
Tumor
-0.5
416
Normal
-0.5
724
Normal
-0.5
671
Tumor
-0.5
743
Tumor
-0.5
375
Tumor
-0.5
951
Tumor
-0.6
131
Tumor
-0.6
525
Tumor
-0.6
343
Tumor
-0.6
545
Tumor
-0.6
171
Tumor
-0.6
355
Tumor
-0.6
975
Tumor
-0.6
915
Tumor
-0.6
924
Normal
-0.6
351
Tumor
-0.7
517
Tumor
-0.7
537
Tumor
-0.7
185
Tumor
-0.7
967
Tumor
-0.7
187
Tumor
-0.9
1013
Tumor
-0.9
411
Tumor
-1.1
963
Tumor
-1.1
923
Tumor
-1.1
957
Tumor
-1.3
965
Tumor
-1.4
471
Tumor
N/A
472
Normal
N/A
473
Tumor
N/A
474
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
481
Tumor
N/A
482
Normal
N/A
483
Tumor
N/A
484
Normal
N/A
487
Tumor
N/A
488
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
494
Normal
N/A
497
Tumor
N/A
498
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1046
Normal
N/A
1045
Tumor
N/A
535
Tumor
N/A
536
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
211
Tumor
N/A
212
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
223
Tumor
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
