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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FIBP is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
86.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
76.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
76.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
75.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
70.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
64.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
61.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
60.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
59.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
59.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
59.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
58.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
55.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
54.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
52.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
52.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
52.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
51.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
50.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
50.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
50.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
50.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
49.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
49.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
49.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
49.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
49.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
48.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
48.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
48.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
48.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
47.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
47.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
47.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
46.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
46.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
45.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
45.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
43.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
43.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
43.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
43.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
43.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
43.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
42.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
42.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
42.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
42.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
41.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
41.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
41.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
41.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
41.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
41.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
40.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
40.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
40.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
40.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
40.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
39.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
39.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
39.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
39.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
39.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
39.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
39.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
39.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
38.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
38.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
38.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
38.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
38.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
38.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
38.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
37.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
37.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
37.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
37.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
37.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
37.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
36.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
36.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
36.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
36.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
36.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
36.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
35.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
35.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
35.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
35.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
35.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
35.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
35.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
35.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
35.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
34.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
34.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
34.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
34.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
33.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
33.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
33.7
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
33.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
33.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
33.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
33.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
33.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
33.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
33.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
33.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
33.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
33.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
33.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
32.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
32.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
32.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
32.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
32.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
32.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
32.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
32.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
32.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
31.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
31.8
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
31.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
31.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
31.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
31.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
31.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
31.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
31.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
31.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
31.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
31.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
31.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
30.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
30.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
30.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
30.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
30.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
30.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
30.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
30.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
30.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
30.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
30.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
30.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
30.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
29.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
29.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
29.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
29.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
29.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
29.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
29.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
29.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
29.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
29.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
29.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
29.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
29.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
29.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
28.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
28.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
28.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
28.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
28.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
28.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
28.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
28.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
28.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
28.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
28.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
28.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
28.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
28.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
28.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
27.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
27.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
27.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
27.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
27.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
27.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
27.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
27.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
27.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
27.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
27.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
27.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
27.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
27.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
27.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
27.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
26.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
26.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
26.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
26.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
26.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
26.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
26.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
25.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
25.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
25.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
25.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
25.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
25.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
25.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
25.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
25.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
25.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
25.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
25.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
25.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
25.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
24.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
24.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
24.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
24.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
24.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
24.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
23.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
23.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
23.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
23.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
23.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
23.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
23.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
23.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
23.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
23.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
22.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
22.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
22.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
22.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
22.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
22.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
22.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
22.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
22.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
22.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
22.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
22.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
22.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
22.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
22.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
21.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
21.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
21.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
21.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
21.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
21.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
21.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
21.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
21.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
21.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
21.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
21.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
21.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
20.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
20.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
20.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
20.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
20.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
20.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
20.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
20.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
20.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
20.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
20.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
20.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
20.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
19.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
19.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
19.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
19.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
19.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
19.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
19.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
19.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
18.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
18.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
18.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
18.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
18.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
18.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
18.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
18.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
18.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
17.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
17.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
17.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
16.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
16.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
16.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
16.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
16.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
16.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
16.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
16.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
16.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
16.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
15.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
15.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
14.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
14.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
14.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
13.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
13.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
13.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
13.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
13.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
12.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
12.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FIBP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.1
Number of samples
231
Samples
Sample
Description
TPM
DO45289
0 years, female, NA, stage:3, alive, 360 days
86.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
67.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
66.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
62.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
54.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
53.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
52.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
51.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
50.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
49.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
49.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
49.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
47.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
45.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
45.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
44.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
43.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
41.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
41.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
40.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
39.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
39.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
38.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
38.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
37.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
37.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
36.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
36.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
35.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
34.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
33.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
33.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
33.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
33.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
32.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
32.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
32.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
30.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
30.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
30.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
29.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
29.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
28.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
28.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
28.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
28.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
27.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
27.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
27.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
27.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
27.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
26.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
26.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
26.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
26.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
25.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
25.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
25.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
25.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
25.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
25.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
25.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
25.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
25.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
25.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
24.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
24.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
24.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
24.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
24.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
24.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
24.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
23.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
23.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
23.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
23.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
23.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
23.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
23.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
23.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
23.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
23.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
22.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
22.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
22.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
22.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
22.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
22.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
21.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
21.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
21.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
21.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
21.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
20.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
20.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
20.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
20.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
20.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
20.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
20.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
20.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
20.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
19.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
19.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
19.7
DO48743
0 years, female, NA, stage:2, alive, 570 days
19.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
19.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
19.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
19.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
19.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
19.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
19.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
19.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
19.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
18.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
18.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
18.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
18.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
18.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
18.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
18.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
18.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
18.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
18.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
18.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
18.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
18.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
17.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
17.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
17.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
17.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
17.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
17.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
17.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
17.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
16.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
16.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
16.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
16.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
16.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
16.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
16.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
16.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
16.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
16.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
16.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
16.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
16.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
15.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
15.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.5
DO45117
0 years, female, NA, stage:2, dead, 1110 days
14.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
14.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
14.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
13.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
13.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
13.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
13.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
13.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
13.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
13.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.8
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
11.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
11.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
10.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
277
Tumor
0.8
661
Tumor
0.8
463
Tumor
0.7
545
Tumor
0.6
527
Tumor
0.6
285
Tumor
0.5
413
Tumor
0.5
147
Tumor
0.5
351
Tumor
0.4
221
Tumor
0.4
663
Tumor
0.4
983
Tumor
0.4
391
Tumor
0.4
195
Tumor
0.4
313
Tumor
0.4
411
Tumor
0.4
571
Tumor
0.3
937
Tumor
0.3
967
Tumor
0.3
523
Tumor
0.3
744
Normal
0.3
573
Tumor
0.3
877
Tumor
0.3
851
Tumor
0.3
257
Tumor
0.3
944
Normal
0.3
938
Normal
0.3
192
Normal
0.3
311
Tumor
0.3
865
Tumor
0.3
881
Tumor
0.3
367
Tumor
0.3
213
Tumor
0.3
647
Tumor
0.3
685
Tumor
0.3
455
Tumor
0.3
191
Tumor
0.3
497
Tumor
0.3
617
Tumor
0.3
146
Normal
0.3
714
Normal
0.3
981
Tumor
0.3
271
Tumor
0.3
815
Tumor
0.3
666
Normal
0.2
957
Tumor
0.2
352
Normal
0.2
1043
Tumor
0.2
1031
Tumor
0.2
686
Normal
0.2
727
Tumor
0.2
664
Normal
0.2
131
Tumor
0.2
536
Normal
0.2
222
Normal
0.2
737
Tumor
0.2
672
Normal
0.2
858
Normal
0.2
467
Tumor
0.2
538
Normal
0.2
385
Tumor
0.2
862
Normal
0.2
975
Tumor
0.2
554
Normal
0.2
553
Tumor
0.2
498
Normal
0.2
641
Tumor
0.2
344
Normal
0.2
267
Tumor
0.2
563
Tumor
0.2
746
Normal
0.2
778
Normal
0.2
141
Tumor
0.2
217
Tumor
0.2
211
Tumor
0.2
443
Tumor
0.2
662
Normal
0.2
922
Normal
0.2
513
Tumor
0.2
867
Tumor
0.2
218
Normal
0.2
126
Normal
0.2
386
Normal
0.2
368
Normal
0.2
857
Tumor
0.2
387
Tumor
0.2
954
Normal
0.2
493
Tumor
0.2
723
Tumor
0.2
524
Normal
0.2
262
Normal
0.2
431
Tumor
0.2
341
Tumor
0.2
268
Normal
0.2
818
Normal
0.2
528
Normal
0.2
432
Normal
0.1
558
Normal
0.1
968
Normal
0.1
878
Normal
0.1
223
Tumor
0.1
135
Tumor
0.1
392
Normal
0.1
1044
Normal
0.1
327
Tumor
0.1
824
Normal
0.1
915
Tumor
0.1
874
Normal
0.1
697
Tumor
0.1
695
Tumor
0.1
786
Normal
0.1
665
Tumor
0.1
526
Normal
0.1
648
Normal
0.1
515
Tumor
0.1
518
Normal
0.1
722
Normal
0.1
488
Normal
0.1
196
Normal
0.1
514
Normal
0.1
534
Normal
0.1
671
Tumor
0.1
384
Normal
0.1
297
Tumor
0.1
882
Normal
0.1
574
Normal
0.1
492
Normal
0.1
741
Tumor
0.1
142
Normal
0.1
478
Normal
0.1
261
Tumor
0.1
436
Normal
0.1
716
Normal
0.1
756
Normal
0.1
456
Normal
0.1
926
Normal
0.1
738
Normal
0.1
312
Normal
0.1
966
Normal
0.1
342
Normal
0.1
516
Normal
0.1
1046
Normal
0.1
444
Normal
0.1
376
Normal
0.1
572
Normal
0.1
814
Normal
0.1
956
Normal
0.1
343
Tumor
0.1
212
Normal
0.1
136
Normal
0.1
112
Tumor
0.1
567
Tumor
0.1
394
Normal
0.1
468
Normal
0.1
224
Normal
0.1
777
Tumor
0.1
866
Normal
0.1
124
Normal
0.1
951
Tumor
0.1
698
Normal
0.1
921
Tumor
0.1
114
Normal
0.1
982
Normal
0.1
396
Normal
0.1
494
Normal
0.1
426
Normal
0.1
852
Normal
0.1
434
Normal
0.1
138
Normal
0.1
357
Tumor
0.1
298
Normal
0.1
332
Normal
0.1
331
Tumor
0.1
912
Normal
0.1
952
Normal
0.1
1025
Tumor
0.1
1014
Normal
0.1
214
Normal
0.1
464
Normal
0.0
742
Normal
0.0
984
Normal
0.0
383
Tumor
0.0
132
Normal
0.0
462
Normal
0.0
721
Tumor
0.0
128
Normal
0.0
314
Normal
0.0
328
Normal
0.0
125
Tumor
0.0
361
Tumor
0.0
1032
Normal
0.0
816
Normal
0.0
1013
Tumor
0.0
964
Normal
0.0
388
Normal
0.0
414
Normal
0.0
616
Normal
0.0
482
Normal
0.0
943
Tumor
0.0
916
Normal
0.0
976
Normal
0.0
272
Normal
0.0
172
Normal
0.0
363
Tumor
0.0
446
Normal
0.0
448
Normal
0.0
884
Normal
0.0
557
Tumor
0.0
918
Normal
0.0
1028
Normal
0.0
728
Normal
0.0
1041
Tumor
0.0
258
Normal
0.0
278
Normal
0.0
481
Tumor
0.0
978
Normal
0.0
416
Normal
0.0
861
Tumor
0.0
113
Tumor
0.0
743
Tumor
0.0
568
Normal
0.0
546
Normal
0.0
452
Normal
0.0
185
Tumor
0.0
365
Tumor
0.0
375
Tumor
0.0
484
Normal
0.0
913
Tumor
0.0
474
Normal
0.0
564
Normal
0.0
914
Normal
0.0
1027
Tumor
0.0
745
Tumor
0.0
364
Normal
0.0
955
Tumor
0.0
137
Tumor
0.0
148
Normal
0.0
162
Normal
0.0
473
Tumor
0.0
466
Normal
0.0
1016
Normal
0.0
111
Normal
0.0
618
Normal
0.0
868
Normal
0.0
642
Normal
0.0
228
Normal
0.0
232
Normal
0.0
813
Tumor
0.0
615
Tumor
0.0
491
Tumor
0.0
958
Normal
0.0
924
Normal
0.0
447
Tumor
0.0
362
Normal
0.0
425
Tumor
0.0
965
Tumor
0.0
412
Normal
0.0
917
Tumor
0.0
286
Normal
0.0
284
Normal
0.0
472
Normal
0.0
1021
Tumor
0.0
953
Tumor
0.0
415
Tumor
-0.1
127
Tumor
-0.1
636
Normal
-0.1
188
Normal
-0.1
421
Tumor
-0.1
366
Normal
-0.1
424
Normal
-0.1
1026
Normal
-0.1
355
Tumor
-0.1
864
Normal
-0.1
628
Normal
-0.1
356
Normal
-0.1
428
Normal
-0.1
423
Tumor
-0.1
186
Normal
-0.1
433
Tumor
-0.1
715
Tumor
-0.1
227
Tumor
-0.1
283
Tumor
-0.1
517
Tumor
-0.1
145
Tumor
-0.1
422
Normal
-0.1
393
Tumor
-0.1
1042
Normal
-0.1
533
Tumor
-0.1
487
Tumor
-0.1
873
Tumor
-0.1
817
Tumor
-0.1
395
Tumor
-0.1
187
Tumor
-0.1
823
Tumor
-0.1
451
Tumor
-0.1
1022
Normal
-0.1
785
Tumor
-0.1
696
Normal
-0.1
358
Normal
-0.1
1045
Tumor
-0.1
537
Tumor
-0.1
483
Tumor
-0.1
354
Normal
-0.1
883
Tumor
-0.2
925
Tumor
-0.2
713
Tumor
-0.2
1015
Tumor
-0.2
465
Tumor
-0.2
755
Tumor
-0.2
471
Tumor
-0.2
923
Tumor
-0.2
461
Tumor
-0.2
535
Tumor
-0.2
231
Tumor
-0.2
963
Tumor
-0.2
161
Tumor
-0.2
123
Tumor
-0.2
477
Tumor
-0.3
525
Tumor
-0.3
171
Tumor
-0.3
445
Tumor
-0.3
724
Normal
-0.3
911
Tumor
-0.4
353
Tumor
-0.4
863
Tumor
-0.4
427
Tumor
-0.4
627
Tumor
-0.5
435
Tumor
-0.5
977
Tumor
-0.5
635
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
