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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF24 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
34.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
29.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
21.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
21.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
21.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
21.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
19.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
18.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
17.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
17.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
17.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
17.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
17.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
16.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
16.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
15.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
15.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
15.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
14.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
14.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
14.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
13.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
13.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
13.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
13.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
13.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
13.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
12.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
12.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
12.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
12.2
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
11.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
11.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
11.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
11.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
11.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
10.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
10.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
10.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
10.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
10.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
10.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
9.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
9.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
9.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
9.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
9.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
9.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
9.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
9.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
9.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
9.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
8.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
8.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
8.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.7
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
8.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
8.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
8.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
8.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
8.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
8.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
7.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.7
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
7.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
7.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
7.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
7.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
7.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
7.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
6.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
6.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
6.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
6.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
6.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
6.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
6.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
5.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
5.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
5.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
5.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
5.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
5.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
5.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
4.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
4.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.4
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
4.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
4.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
4.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
3.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
3.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
2.6
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF24 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.7
Number of samples
231
Samples
Sample
Description
TPM
DO23521
0 years, male, NA, stage:3, alive, 1110 days
40.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
31.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
27.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
26.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
25.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
25.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
25.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
24.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
24.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
24.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
24.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
23.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
22.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
21.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
21.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
21.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
21.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
20.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
20.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
20.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
18.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
18.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
18.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
18.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
18.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
18.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
17.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
17.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
17.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
17.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
17.1
DO45219
0 years, male, NA, stage:2, alive, 1080 days
17.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
16.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
16.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
16.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
16.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
16.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
16.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
16.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
16.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
15.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
15.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
15.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
15.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
15.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
15.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
14.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
14.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
14.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
14.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
14.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
14.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
14.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
13.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
13.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
13.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
13.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
12.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
12.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
12.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
12.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
12.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
11.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
11.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
11.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
11.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
10.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
10.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
10.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
10.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
10.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
10.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
10.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
9.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
9.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
9.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
9.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
8.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
7.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
7.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
6.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
4.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
123
Tumor
1.2
112
Tumor
0.9
285
Tumor
0.9
385
Tumor
0.9
497
Tumor
0.9
367
Tumor
0.8
983
Tumor
0.8
535
Tumor
0.8
1025
Tumor
0.7
473
Tumor
0.7
351
Tumor
0.7
211
Tumor
0.7
125
Tumor
0.7
124
Normal
0.7
635
Tumor
0.6
523
Tumor
0.6
545
Tumor
0.6
815
Tumor
0.6
487
Tumor
0.6
411
Tumor
0.6
161
Tumor
0.6
661
Tumor
0.6
114
Normal
0.6
695
Tumor
0.6
923
Tumor
0.6
387
Tumor
0.6
297
Tumor
0.5
393
Tumor
0.5
313
Tumor
0.5
743
Tumor
0.5
391
Tumor
0.5
1021
Tumor
0.5
921
Tumor
0.5
341
Tumor
0.5
567
Tumor
0.5
355
Tumor
0.5
912
Normal
0.5
277
Tumor
0.5
517
Tumor
0.5
671
Tumor
0.4
213
Tumor
0.4
463
Tumor
0.4
113
Tumor
0.4
882
Normal
0.4
937
Tumor
0.4
111
Normal
0.4
425
Tumor
0.4
493
Tumor
0.4
647
Tumor
0.4
467
Tumor
0.4
737
Tumor
0.3
573
Tumor
0.3
128
Normal
0.3
331
Tumor
0.3
1013
Tumor
0.3
447
Tumor
0.3
217
Tumor
0.3
195
Tumor
0.3
1031
Tumor
0.3
465
Tumor
0.3
131
Tumor
0.3
813
Tumor
0.3
232
Normal
0.3
967
Tumor
0.3
383
Tumor
0.3
617
Tumor
0.3
817
Tumor
0.3
863
Tumor
0.3
375
Tumor
0.3
478
Normal
0.3
777
Tumor
0.3
386
Normal
0.3
357
Tumor
0.3
261
Tumor
0.3
363
Tumor
0.3
364
Normal
0.3
917
Tumor
0.3
1045
Tumor
0.3
344
Normal
0.3
185
Tumor
0.3
715
Tumor
0.2
964
Normal
0.2
171
Tumor
0.2
572
Normal
0.2
698
Normal
0.2
491
Tumor
0.2
396
Normal
0.2
365
Tumor
0.2
451
Tumor
0.2
477
Tumor
0.2
958
Normal
0.2
1042
Normal
0.2
222
Normal
0.2
814
Normal
0.2
527
Tumor
0.2
343
Tumor
0.2
427
Tumor
0.2
471
Tumor
0.2
342
Normal
0.2
1044
Normal
0.2
851
Tumor
0.2
126
Normal
0.2
444
Normal
0.2
963
Tumor
0.2
146
Normal
0.2
558
Normal
0.2
564
Normal
0.2
636
Normal
0.2
258
Normal
0.2
218
Normal
0.2
413
Tumor
0.2
641
Tumor
0.2
553
Tumor
0.2
778
Normal
0.2
221
Tumor
0.2
642
Normal
0.2
1016
Normal
0.2
568
Normal
0.2
388
Normal
0.2
982
Normal
0.2
196
Normal
0.2
823
Tumor
0.2
127
Tumor
0.1
615
Tumor
0.1
472
Normal
0.1
968
Normal
0.1
272
Normal
0.1
1014
Normal
0.1
526
Normal
0.1
268
Normal
0.1
878
Normal
0.1
533
Tumor
0.1
786
Normal
0.1
665
Tumor
0.1
392
Normal
0.1
492
Normal
0.1
857
Tumor
0.1
395
Tumor
0.1
866
Normal
0.1
744
Normal
0.1
188
Normal
0.1
955
Tumor
0.1
257
Tumor
0.1
672
Normal
0.1
818
Normal
0.1
433
Tumor
0.1
1046
Normal
0.1
966
Normal
0.1
455
Tumor
0.1
452
Normal
0.1
361
Tumor
0.1
298
Normal
0.1
663
Tumor
0.1
756
Normal
0.1
468
Normal
0.1
984
Normal
0.1
262
Normal
0.1
498
Normal
0.1
873
Tumor
0.1
214
Normal
0.1
192
Normal
0.1
563
Tumor
0.1
328
Normal
0.1
474
Normal
0.1
415
Tumor
0.1
224
Normal
0.1
484
Normal
0.1
513
Tumor
0.1
686
Normal
0.1
456
Normal
0.1
483
Tumor
0.1
824
Normal
0.1
466
Normal
0.1
1041
Tumor
0.1
1043
Tumor
0.1
284
Normal
0.1
755
Tumor
0.1
574
Normal
0.1
432
Normal
0.1
228
Normal
0.1
628
Normal
0.1
494
Normal
0.1
488
Normal
0.1
741
Tumor
0.0
922
Normal
0.0
977
Tumor
0.0
231
Tumor
0.0
464
Normal
0.0
278
Normal
0.0
448
Normal
0.0
132
Normal
0.0
461
Tumor
0.0
951
Tumor
0.0
1032
Normal
0.0
571
Tumor
0.0
881
Tumor
0.0
618
Normal
0.0
557
Tumor
0.0
745
Tumor
0.0
412
Normal
0.0
664
Normal
0.0
186
Normal
0.0
312
Normal
0.0
746
Normal
0.0
723
Tumor
0.0
271
Tumor
0.0
1026
Normal
0.0
926
Normal
0.0
481
Tumor
0.0
627
Tumor
0.0
524
Normal
0.0
696
Normal
0.0
862
Normal
0.0
286
Normal
0.0
943
Tumor
0.0
394
Normal
0.0
445
Tumor
0.0
536
Normal
0.0
516
Normal
0.0
356
Normal
N/A
283
Tumor
0.0
1028
Normal
0.0
714
Normal
0.0
162
Normal
0.0
514
Normal
0.0
956
Normal
0.0
852
Normal
0.0
436
Normal
0.0
311
Tumor
0.0
446
Normal
0.0
816
Normal
0.0
738
Normal
0.0
462
Normal
0.0
267
Tumor
0.0
858
Normal
0.0
925
Tumor
0.0
716
Normal
0.0
223
Tumor
0.0
431
Tumor
0.0
874
Normal
0.0
147
Tumor
0.0
525
Tumor
0.0
138
Normal
0.0
172
Normal
0.0
142
Normal
0.0
482
Normal
0.0
416
Normal
0.0
434
Normal
0.0
666
Normal
0.0
978
Normal
0.0
957
Tumor
0.0
366
Normal
0.0
518
Normal
0.0
145
Tumor
0.0
327
Tumor
0.0
727
Tumor
-0.1
864
Normal
-0.1
953
Tumor
-0.1
728
Normal
-0.1
722
Normal
-0.1
376
Normal
-0.1
785
Tumor
-0.1
1022
Normal
-0.1
136
Normal
-0.1
648
Normal
-0.1
362
Normal
-0.1
938
Normal
-0.1
883
Tumor
-0.1
515
Tumor
-0.1
724
Normal
-0.1
952
Normal
-0.1
384
Normal
-0.1
314
Normal
-0.1
148
Normal
-0.1
423
Tumor
-0.1
332
Normal
-0.1
191
Tumor
-0.1
227
Tumor
-0.1
141
Tumor
-0.1
976
Normal
-0.1
865
Tumor
-0.1
916
Normal
-0.1
135
Tumor
-0.1
443
Tumor
-0.1
915
Tumor
-0.1
965
Tumor
-0.1
861
Tumor
-0.1
187
Tumor
-0.1
662
Normal
-0.1
924
Normal
-0.1
422
Normal
-0.1
685
Tumor
-0.1
421
Tumor
-0.1
697
Tumor
-0.1
742
Normal
-0.2
212
Normal
-0.2
954
Normal
-0.2
975
Tumor
-0.2
981
Tumor
-0.2
868
Normal
-0.2
424
Normal
-0.2
1015
Tumor
-0.2
877
Tumor
-0.2
538
Normal
-0.2
918
Normal
-0.2
435
Tumor
-0.2
428
Normal
-0.2
721
Tumor
-0.2
368
Normal
-0.2
426
Normal
-0.2
546
Normal
-0.2
414
Normal
-0.2
867
Tumor
-0.2
1027
Tumor
-0.3
944
Normal
-0.3
358
Normal
-0.3
554
Normal
-0.3
616
Normal
-0.3
352
Normal
-0.3
137
Tumor
-0.3
354
Normal
-0.3
534
Normal
-0.3
713
Tumor
-0.3
911
Tumor
-0.3
537
Tumor
-0.3
353
Tumor
-0.4
913
Tumor
-0.4
884
Normal
-0.4
528
Normal
-0.4
914
Normal
-4.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
