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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FGGY is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
604.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
517.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
497.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
411.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
370.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
366.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
348.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
348.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
344.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
342.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
335.0
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
320.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
304.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
300.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
299.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
286.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
286.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
286.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
283.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
277.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
276.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
267.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
265.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
258.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
252.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
247.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
246.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
243.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
242.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
240.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
235.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
234.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
231.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
229.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
223.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
221.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
213.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
211.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
208.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
203.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
201.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
197.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
191.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
189.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
189.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
186.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
182.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
182.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
181.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
180.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
176.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
173.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
172.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
172.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
170.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
168.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
167.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
164.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
163.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
160.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
156.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
155.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
154.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
154.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
154.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
151.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
151.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
149.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
148.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
147.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
146.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
146.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
145.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
145.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
142.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
139.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
137.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
137.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
136.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
132.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
132.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
131.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
130.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
129.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
129.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
127.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
127.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
126.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
125.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
125.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
124.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
124.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
123.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
122.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
121.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
120.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
118.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
118.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
116.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
115.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
113.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
112.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
111.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
108.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
107.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
106.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
105.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
104.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
103.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
103.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
102.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
101.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
100.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
100.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
98.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
97.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
96.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
94.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
93.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
93.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
93.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
92.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
92.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
92.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
90.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
89.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
87.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
87.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
86.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
85.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
85.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
84.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
83.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
82.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
82.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
81.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
81.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
81.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
77.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
77.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
76.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
75.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
75.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
73.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
73.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
73.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
71.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
68.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
68.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
67.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
67.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
66.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
66.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
66.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
65.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
65.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
65.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
64.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
64.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
63.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
63.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
62.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
62.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
60.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
60.2
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
59.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
59.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
59.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
59.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
58.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
57.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
57.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
56.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
55.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
55.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
54.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
54.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
52.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
52.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
51.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
51.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
50.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
48.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
47.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
47.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
47.0
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
46.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
46.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
46.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
44.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
44.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
44.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
43.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
43.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
42.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
42.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
42.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
40.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
39.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
39.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
38.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
38.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
38.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
37.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
36.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
35.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
35.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
35.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
34.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
34.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
33.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
33.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
32.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
31.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
31.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
31.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
31.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
29.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
29.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
29.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
29.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
28.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
28.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
28.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
28.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
28.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
28.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
27.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
27.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
27.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
26.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
25.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
25.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
25.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
24.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
24.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
24.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
24.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
23.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
23.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
23.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
22.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
22.3
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
21.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
20.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
20.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
20.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
20.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
19.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
19.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
18.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
18.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
17.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
17.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
16.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
16.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
16.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
16.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
15.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
15.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
15.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
14.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
13.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
12.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
12.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
12.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
11.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
11.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
10.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
10.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.2
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
8.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
8.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
8.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
8.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
8.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
8.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
7.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
7.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
7.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
7.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
6.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
6.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
6.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5.9
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
5.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
5.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
5.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
5.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
4.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
4.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
4.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
4.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
4.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
4.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
4.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
3.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
2.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
2.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
2.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
1.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FGGY is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.3
Number of samples
231
Samples
Sample
Description
TPM
DO23540
0 years, male, NA, stage:1, alive, 750 days
191.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
161.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
142.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
139.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
132.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
125.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
122.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
114.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
105.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
102.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
102.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
100.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
94.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
94.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
91.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
90.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
85.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
84.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
84.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
82.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
82.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
79.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
78.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
77.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
77.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
76.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
72.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
71.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
70.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
70.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
70.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
67.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
66.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
65.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
63.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
62.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
61.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
60.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
60.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
58.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
57.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
57.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
57.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
56.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
53.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
51.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
51.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
51.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
51.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
48.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
48.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
47.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
46.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
45.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
45.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
45.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
44.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
44.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
43.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
43.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
43.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
43.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
42.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
42.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
41.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
41.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
40.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
39.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
38.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
38.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
38.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
37.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
37.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
36.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
35.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
34.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
33.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
31.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
31.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
30.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
30.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
29.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
28.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
28.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
28.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
28.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
28.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
27.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
26.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
26.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
26.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
25.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
25.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
25.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
25.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
24.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
24.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
23.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
23.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
22.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
22.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
22.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
21.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
20.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
20.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
19.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
18.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
18.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
18.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
18.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
17.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
16.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
16.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
15.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
15.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
15.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
15.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
15.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
14.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
12.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
12.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
11.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
11.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
9.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
8.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
8.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
7.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
7.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
7.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
7.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
6.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
6.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
6.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
6.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
4.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
4.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
4.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
3.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
3.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
3.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
3.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
3.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
3.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
3.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
3.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
3.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
3.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
3.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
2.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
2.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
2.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
2.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
2.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
2.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
1.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
1.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
1.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
111
Normal
1.1
723
Tumor
1.1
298
Normal
1.1
128
Normal
1.0
698
Normal
1.0
1022
Normal
1.0
568
Normal
1.0
196
Normal
1.0
186
Normal
0.9
728
Normal
0.9
742
Normal
0.9
436
Normal
0.9
952
Normal
0.9
738
Normal
0.9
756
Normal
0.9
648
Normal
0.9
746
Normal
0.9
1026
Normal
0.9
944
Normal
0.9
426
Normal
0.9
664
Normal
0.9
342
Normal
0.9
862
Normal
0.9
278
Normal
0.8
314
Normal
0.8
866
Normal
0.8
1046
Normal
0.8
1016
Normal
0.8
714
Normal
0.8
824
Normal
0.8
448
Normal
0.8
966
Normal
0.8
132
Normal
0.8
114
Normal
0.8
332
Normal
0.8
778
Normal
0.8
816
Normal
0.8
126
Normal
0.8
912
Normal
0.8
484
Normal
0.8
572
Normal
0.8
432
Normal
0.7
744
Normal
0.7
918
Normal
0.7
882
Normal
0.7
172
Normal
0.7
938
Normal
0.7
818
Normal
0.7
222
Normal
0.7
858
Normal
0.7
662
Normal
0.7
358
Normal
0.7
666
Normal
0.7
424
Normal
0.7
864
Normal
0.7
162
Normal
0.7
414
Normal
0.7
722
Normal
0.7
564
Normal
0.7
554
Normal
0.7
456
Normal
0.7
526
Normal
0.7
558
Normal
0.7
232
Normal
0.7
488
Normal
0.7
356
Normal
0.7
428
Normal
0.7
926
Normal
0.7
136
Normal
0.7
462
Normal
0.6
636
Normal
0.6
922
Normal
0.6
148
Normal
0.6
1014
Normal
0.6
574
Normal
0.6
214
Normal
0.6
468
Normal
0.6
964
Normal
0.6
696
Normal
0.6
452
Normal
0.6
616
Normal
0.6
534
Normal
0.6
388
Normal
0.6
352
Normal
0.6
618
Normal
0.6
366
Normal
0.6
914
Normal
0.6
124
Normal
0.6
968
Normal
0.6
138
Normal
0.6
466
Normal
0.6
354
Normal
0.6
956
Normal
0.6
286
Normal
0.6
228
Normal
0.6
396
Normal
0.6
392
Normal
0.6
518
Normal
0.6
464
Normal
0.6
394
Normal
0.6
386
Normal
0.5
376
Normal
0.5
218
Normal
0.5
364
Normal
0.5
146
Normal
0.5
868
Normal
0.5
786
Normal
0.5
528
Normal
0.5
878
Normal
0.5
686
Normal
0.5
446
Normal
0.5
412
Normal
0.5
1032
Normal
0.5
482
Normal
0.5
955
Tumor
0.5
984
Normal
0.5
422
Normal
0.5
474
Normal
0.5
628
Normal
0.5
368
Normal
0.5
1028
Normal
0.5
514
Normal
0.5
272
Normal
0.4
924
Normal
0.4
716
Normal
0.4
982
Normal
0.4
1044
Normal
0.4
312
Normal
0.4
472
Normal
0.4
884
Normal
0.4
874
Normal
0.4
642
Normal
0.4
546
Normal
0.4
362
Normal
0.4
262
Normal
0.4
958
Normal
0.4
344
Normal
0.4
976
Normal
0.4
416
Normal
0.4
494
Normal
0.3
672
Normal
0.3
142
Normal
0.3
516
Normal
0.3
617
Tumor
0.3
434
Normal
0.3
212
Normal
0.3
852
Normal
0.3
384
Normal
0.2
954
Normal
0.2
284
Normal
0.2
911
Tumor
0.2
137
Tumor
0.2
328
Normal
0.1
981
Tumor
0.1
978
Normal
0.1
1042
Normal
0.1
268
Normal
0.1
916
Normal
0.1
925
Tumor
0.0
224
Normal
0.0
195
Tumor
0.0
538
Normal
0.0
353
Tumor
0.0
444
Normal
0.0
258
Normal
0.0
113
Tumor
0.0
1045
Tumor
0.0
721
Tumor
0.0
192
Normal
-0.1
755
Tumor
-0.1
492
Normal
-0.1
185
Tumor
-0.1
481
Tumor
-0.1
327
Tumor
-0.1
524
Normal
-0.1
112
Tumor
-0.1
627
Tumor
-0.1
536
Normal
-0.2
515
Tumor
-0.2
145
Tumor
-0.2
465
Tumor
-0.2
498
Normal
-0.2
217
Tumor
-0.2
387
Tumor
-0.2
365
Tumor
-0.2
857
Tumor
-0.2
478
Normal
-0.3
391
Tumor
-0.3
513
Tumor
-0.3
741
Tumor
-0.3
563
Tumor
-0.4
267
Tumor
-0.4
913
Tumor
-0.4
261
Tumor
-0.4
188
Normal
-0.4
695
Tumor
-0.4
423
Tumor
-0.4
191
Tumor
-0.4
615
Tumor
-0.5
777
Tumor
-0.5
635
Tumor
-0.5
415
Tumor
-0.5
477
Tumor
-0.5
873
Tumor
-0.5
487
Tumor
-0.5
443
Tumor
-0.5
433
Tumor
-0.6
461
Tumor
-0.6
425
Tumor
-0.6
533
Tumor
-0.6
467
Tumor
-0.6
445
Tumor
-0.6
447
Tumor
-0.6
1015
Tumor
-0.6
421
Tumor
-0.6
171
Tumor
-0.6
917
Tumor
-0.6
814
Normal
-0.6
223
Tumor
-0.6
1041
Tumor
-0.6
867
Tumor
-0.6
393
Tumor
-0.6
745
Tumor
-0.7
943
Tumor
-0.7
141
Tumor
-0.7
361
Tumor
-0.7
861
Tumor
-0.7
727
Tumor
-0.7
863
Tumor
-0.7
785
Tumor
-0.8
685
Tumor
-0.8
341
Tumor
-0.8
665
Tumor
-0.8
313
Tumor
-0.8
713
Tumor
-0.8
297
Tumor
-0.9
471
Tumor
-0.9
823
Tumor
-0.9
135
Tumor
-0.9
357
Tumor
-0.9
535
Tumor
-0.9
491
Tumor
-0.9
383
Tumor
-0.9
527
Tumor
-0.9
663
Tumor
-0.9
257
Tumor
-0.9
571
Tumor
-0.9
127
Tumor
-1.0
915
Tumor
-1.0
451
Tumor
-1.0
427
Tumor
-1.0
937
Tumor
-1.0
951
Tumor
-1.0
881
Tumor
-1.0
1027
Tumor
-1.0
161
Tumor
-1.0
213
Tumor
-1.0
187
Tumor
-1.0
865
Tumor
-1.0
125
Tumor
-1.0
883
Tumor
-1.0
435
Tumor
-1.0
813
Tumor
-1.0
411
Tumor
-1.0
123
Tumor
-1.1
311
Tumor
-1.1
147
Tumor
-1.1
647
Tumor
-1.1
431
Tumor
-1.1
1021
Tumor
-1.1
737
Tumor
-1.1
367
Tumor
-1.1
221
Tumor
-1.1
413
Tumor
-1.1
921
Tumor
-1.1
395
Tumor
-1.2
277
Tumor
-1.2
557
Tumor
-1.2
497
Tumor
-1.2
331
Tumor
-1.2
661
Tumor
-1.2
231
Tumor
-1.2
463
Tumor
-1.2
493
Tumor
-1.3
1013
Tumor
-1.3
977
Tumor
-1.3
271
Tumor
-1.3
715
Tumor
-1.3
983
Tumor
-1.3
851
Tumor
-1.3
573
Tumor
-1.3
697
Tumor
-1.4
343
Tumor
-1.4
567
Tumor
-1.4
957
Tumor
-1.4
375
Tumor
-1.4
283
Tumor
-1.4
363
Tumor
-1.4
523
Tumor
-1.4
227
Tumor
-1.4
351
Tumor
-1.4
1025
Tumor
-1.4
355
Tumor
-1.4
975
Tumor
-1.4
953
Tumor
-1.4
877
Tumor
-1.4
131
Tumor
-1.4
641
Tumor
-1.5
1043
Tumor
-1.5
525
Tumor
-1.5
537
Tumor
-1.5
671
Tumor
-1.5
724
Normal
-1.5
545
Tumor
-1.5
517
Tumor
-1.5
815
Tumor
-1.5
211
Tumor
-1.5
553
Tumor
-1.5
455
Tumor
-1.6
385
Tumor
-1.6
923
Tumor
-1.6
483
Tumor
-1.6
963
Tumor
-1.6
743
Tumor
-1.7
967
Tumor
-1.7
473
Tumor
-1.7
817
Tumor
-1.8
965
Tumor
-1.8
285
Tumor
-1.8
1031
Tumor
-1.9
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.