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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
414.1
nTPM
HPA Brain:
116.6
nTPM
GTEx:
414.1
nTPM
FANTOM5:
97.1
Scaled Tags Per Million
Pig:
192.0
nTPM
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
116.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 82.1
2019
Male, age 18, unknown
144.4
2828
Female, age 72, unknown
94.3
1870
Female, age 42, unknown
92.4
1827
Male, age 72, unknown
88.3
2411
Female, age 72, unknown
88.3
2586
Male, age 75, left hemisphere
85.3
1830
Male, age 51, unknown
63.6
1833
Male, age 53, unknown
59.5
2219
Male, age 76, both hemispheres
54.0
2666
Male, age 74, left hemisphere
51.3
Dorsal raphe nucleus nTPM: 84.3
2298
Female, age 72, unknown
113.1
2750
Male, age 76, both hemispheres
90.5
1828
Male, age 53, unknown
79.5
2047
Male, age 72, unknown
74.7
2016
Female, age 72, unknown
63.4
Inferior colliculus nTPM: 74.2
2097
Female, age 72, unknown
95.6
1890
Male, age 53, unknown
89.3
1848
Female, age 42, unknown
62.2
2849
Male, age 72, unknown
49.6
Median raphe nucleus nTPM: 81.6
2220
Male, age 76, midline
81.6
Periaquaductal grey, anterior nTPM: 77.0
1795
Male, age 51, unknown
89.4
1947
Male, age 18, unknown
72.0
2502
Female, age 75, unknown
69.5
Periaquaductal grey, dorsal nTPM: 67.2
2850
Male, age 76, both hemispheres
75.3
1831
Male, age 72, unknown
73.8
1840
Male, age 53, unknown
68.8
2464
Female, age 72, unknown
50.6
Periaquaductal grey, lateral nTPM: 72.3
2272
Male, age 74, both hemispheres
84.0
2053
Male, age 18, unknown
70.1
2140
Male, age 76, both hemispheres
62.8
Pretectal area nTPM: 116.6
2007
Male, age 72, unknown
162.5
1817
Female, age 42, unknown
154.7
1816
Male, age 51, unknown
148.0
2273
Male, age 74, both hemispheres
140.4
1944
Female, age 72, unknown
133.5
1815
Male, age 53, unknown
124.3
2667
Female, age 75, unknown
112.7
2316
Male, age 76, right hemisphere
86.8
2224
Female, age 72, unknown
83.1
2407
Male, age 75, both hemispheres
72.9
2825
Male, age 18, unknown
64.1
Red nucleus nTPM: 95.8
2785
Male, age 18, unknown
130.0
1821
Female, age 72, unknown
117.9
2503
Female, age 72, unknown
111.2
2823
Male, age 76, right hemisphere
101.2
1904
Male, age 53, unknown
99.4
1865
Male, age 51, unknown
97.8
2725
Female, age 75, unknown
92.9
2588
Male, age 74, left hemisphere
92.5
2769
Male, age 72, unknown
85.6
2227
Male, age 72, unknown
84.8
1954
Female, age 42, unknown
74.4
2584
Male, age 75, left hemisphere
61.6
Substantia nigra nTPM: 96.5
1889
Female, age 72, unknown
136.2
1916
Female, age 42, unknown
126.3
1851
Male, age 51, unknown
116.4
2241
Male, age 72, unknown
97.9
2590
Female, age 75, unknown
94.7
1941
Male, age 53, unknown
88.3
2409
Female, age 72, unknown
81.8
2665
Male, age 74, both hemispheres
81.3
2583
Male, age 75, right hemisphere
73.5
2699
Male, age 18, unknown
68.9
Superior colliculus nTPM: 94.8
2587
Male, age 74, left hemisphere
120.0
2087
Female, age 72, unknown
113.4
1796
Male, age 53, unknown
104.4
1913
Female, age 42, unknown
104.2
2668
Female, age 75, unknown
102.0
1995
Male, age 72, unknown
95.3
2261
Male, age 18, unknown
94.3
1895
Male, age 76, right hemisphere
81.1
2664
Male, age 75, both hemispheres
75.5
1839
Male, age 51, unknown
57.8
Ventral tegmental area nTPM: 90.8
1915
Female, age 42, unknown
103.4
2223
Female, age 72, unknown
96.0
2410
Female, age 72, unknown
93.6
1942
Male, age 51, unknown
89.6
2218
Male, age 76, both hemispheres
84.9
2021
Male, age 53, unknown
77.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
414.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 414.1
Samples: 139
Max nTPM: 1016.8
Min nTPM: 180.7
Std nTPM: 134.7
Median nTPM: 384.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1016.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1011.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
790.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
769.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
768.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
754.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
748.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
692.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
674.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
620.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
590.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
587.3
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
580.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
567.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
550.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
548.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
546.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
545.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
535.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
533.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
524.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
517.2
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
508.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
502.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
493.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
493.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
492.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
481.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
469.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
465.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
461.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
459.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
459.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
458.1
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
453.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
452.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
451.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
448.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
443.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
439.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
438.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
428.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
426.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
425.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
425.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
423.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
422.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
419.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
419.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
419.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
416.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
411.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
410.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
410.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
410.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
409.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
407.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
407.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
403.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
402.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
394.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
393.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
393.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
392.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
390.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
389.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
389.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
385.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
385.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
384.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
384.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
382.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
381.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
380.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
380.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
378.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
378.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
376.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
375.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
373.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
373.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
372.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
370.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
366.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
363.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
362.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
362.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
359.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
353.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
352.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
352.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
351.7
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
349.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
349.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
347.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
347.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
345.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
343.6
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
342.9
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
342.7
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
341.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
340.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
338.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
336.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
335.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
334.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
332.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
332.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
325.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
323.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
320.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
320.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
319.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
318.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
313.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
313.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
309.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
309.1
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
303.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
301.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
298.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
297.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
297.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
296.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
295.9
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
288.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
287.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
285.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
280.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
279.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
273.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
268.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
260.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
250.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
243.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
239.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
224.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
194.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
180.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.