COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Not detected
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:276.9 nTPM
HPA:72.1 nTPM
GTEx:276.9 nTPM
FANTOM5:502.6 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells0246810nCPM

COLON - Antibody stainingi
Antibody HPA030665Antibody HPA068563Antibody CAB037231
Endothelial cells Not detectedNot detectedMedium
Glandular cells Not detectedNot detectedMedium
Peripheral nerve/ganglion MediumMediumMedium







COLON - HPA RNA-seqi
Average nTPMi 72.1
overview
Male, age 54
Colon sample 67
nTPM: 26.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 35.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 8.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 43.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 46
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 295.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 22
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 13.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 206.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 12.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 50.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 71.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 105.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 276.9
GTEx sample id Sample description nTPM
198.6264.6345.27.2559.10100200300400500600700800
Colon - Sigmoid
Average nTPM: 276.9
Samples: 419

Max nTPM: 837.4
Min nTPM: 7.2
Std nTPM: 129.7
Median nTPM: 264.6
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 837.4
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 816.2
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 754.3
GTEX-1N2EE-2526-SM-EY5YP 60-69 years, male 729.9
GTEX-17HHE-1626-SM-7DHLN 50-59 years, male 620.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 620.5
GTEX-1LGOU-1726-SM-D3L8P 20-29 years, female 618.6
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 616.7
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 596.7
GTEX-15DYW-2426-SM-7KUG8 60-69 years, female 592.3
GTEX-1HCUA-1926-SM-B2LWE 50-59 years, female 590.6
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18.287.9201.22.7466.6050100150200250300350400450500550600650
Colon - Transverse
Average nTPM: 129.4
Samples: 479

Max nTPM: 665.5
Min nTPM: 2.7
Std nTPM: 134.7
Median nTPM: 87.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 665.5
GTEX-1AX8Z-2726-SM-73KUC 60-69 years, male 656.2
GTEX-1C2JI-1626-SM-7EPHC 50-59 years, male 628.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 599.7
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 596.4
GTEX-17F96-2026-SM-79ON4 70-79 years, male 571.1
GTEX-P4PQ-1426-SM-H6Q72 60-69 years, male 556.8
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 532.9
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 501.7
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 494.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 492.9
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 502.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 502.6
FF:10014-101C5 62,83,84 years, mixed 502.6

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