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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RCAN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
96.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
268.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
242.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
230.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
211.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
211.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
176.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
172.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
169.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
162.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
155.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
153.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
151.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
139.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
135.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
131.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
130.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
122.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
119.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
118.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
115.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
113.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
112.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
112.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
109.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
108.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
102.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
101.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
101.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
99.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
98.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
92.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
91.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
88.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
83.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
81.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
79.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
78.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
78.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
76.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
72.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
72.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
69.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
64.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
61.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
60.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
58.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
57.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
56.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
55.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
53.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
48.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
46.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
45.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
40.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
37.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
32.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
30.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
28.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
18.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
11.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RCAN2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
321.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
271.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
240.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
201.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
201.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
198.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
196.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
193.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
177.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
158.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
155.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
152.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
143.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
138.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
132.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
130.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
130.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
128.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
127.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
126.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
116.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
115.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
112.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
112.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
110.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
109.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
109.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
107.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
106.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
105.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
104.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
102.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
102.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
102.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
98.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
98.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
94.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
94.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
92.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
92.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
91.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
90.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
87.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
86.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
86.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
85.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
85.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
85.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
85.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
83.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
83.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
80.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
80.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
80.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
80.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
79.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
79.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
79.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
79.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
78.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
78.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
78.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
78.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
77.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
77.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
76.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
76.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
76.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
76.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
75.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
75.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
74.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
74.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
74.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
74.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
74.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
73.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
73.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
73.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
73.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
70.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
70.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
68.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
68.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
68.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
68.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
68.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
67.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
67.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
66.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
66.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
66.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
65.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
65.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
65.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
64.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
64.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
63.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
63.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
62.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
62.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
62.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
61.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
60.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
60.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
60.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
59.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
59.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
59.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
59.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
59.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
58.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
57.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
56.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
55.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
55.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
54.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
54.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
54.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
54.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
53.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
52.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
52.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
52.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
52.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
52.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
51.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
51.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
50.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
49.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
49.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
49.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
49.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
49.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
49.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
48.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
48.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
48.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
48.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
47.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
47.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
47.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
46.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
46.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
46.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
46.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
45.8
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
45.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
44.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
44.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
44.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
44.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
44.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
43.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
43.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
43.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
43.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
42.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
42.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
42.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
41.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
41.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
41.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
39.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
39.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
38.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
38.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
38.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
38.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
38.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
38.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
37.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
37.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
37.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
37.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
37.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
36.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
36.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
35.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
35.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
35.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
35.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
35.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
34.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
34.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
34.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
34.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
34.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
34.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
33.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
33.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
32.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
32.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
32.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
31.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
30.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
30.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
30.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
30.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
29.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
29.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
29.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
29.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
28.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
28.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
27.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
27.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
26.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
26.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
26.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
26.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
25.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
25.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
25.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
25.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
25.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
24.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
24.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
24.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
24.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
23.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
23.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
23.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
23.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
22.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
22.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
22.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
21.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
21.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
21.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
21.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
21.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
21.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
21.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
20.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
20.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
20.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
20.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
19.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
19.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
19.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
19.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
18.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
17.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
17.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
17.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
16.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
16.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
15.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
15.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
14.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
14.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
14.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
14.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
13.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
13.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
12.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
12.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
12.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
12.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
11.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
11.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
11.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
11.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
9.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
9.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
8.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
7.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
7.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
7.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
7.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
6.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
6.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
6.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
6.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
4.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
4.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
4.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
4.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
3.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
3.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
3.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
3.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
3.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
2.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
2.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
1.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RCAN2 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
148.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
121.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
114.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
108.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
104.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
103.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
100.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
98.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
92.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
87.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
83.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
82.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
81.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
81.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
80.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
73.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
73.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
72.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
60.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
59.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
59.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
57.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
55.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
42.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
42.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
42.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
40.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
40.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
39.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
34.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
32.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
28.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
27.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
27.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
27.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
19.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
18.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
16.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
12.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
11.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
9.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
8.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
7.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
7.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
6.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
6.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
6.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
5.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
5.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
5.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
5.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
4.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
3.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
3.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
2.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
2.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
2.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
1.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RCAN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
348.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
259.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
169.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
145.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
107.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
106.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
102.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
97.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
71.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
67.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
55.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
54.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
50.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
42.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
41.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
41.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
40.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
33.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
32.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
31.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
31.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
25.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
25.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
24.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
23.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
23.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
21.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
20.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
20.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
19.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
18.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
18.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
17.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
17.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
17.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
16.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
14.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
14.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
13.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
12.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
12.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
12.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
11.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
11.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
11.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
11.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
11.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
10.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
10.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
10.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
9.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
9.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
9.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
8.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
8.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
8.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
8.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
8.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
8.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
8.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
7.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
6.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
6.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
6.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
6.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
6.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
6.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
6.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
6.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
5.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
5.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
5.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
5.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
5.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
5.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
5.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
5.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
5.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
5.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
4.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
4.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
4.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
4.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
4.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
4.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
4.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
4.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
4.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
4.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
3.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
3.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
3.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
3.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
3.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
3.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
2.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
2.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
2.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
2.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
2.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
2.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
2.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
2.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
2.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
1.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
1.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
1.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
1.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
1.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
1.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
1.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
1.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012370003
Tumor
3.1
CPT0071150004
Tumor
2.6
CPT0026410003
Tumor
2.3
CPT0011240003
Tumor
2.1
CPT0065810003
Tumor
1.7
CPT0009060003
Tumor
1.6
CPT0017410003
Tumor
1.6
CPT0085670003
Tumor
1.6
CPT0077490003
Tumor
1.5
CPT0078830003
Tumor
1.3
CPT0079230003
Tumor
1.3
CPT0066470004
Tumor
1.2
CPT0012900004
Tumor
1.0
CPT0015730003
Tumor
0.9
CPT0079380003
Tumor
0.9
CPT0006440003
Tumor
0.7
CPT0086870003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0092790003
Tumor
0.4
CPT0075570001
Normal
0.3
CPT0019990003
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0063320003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0001500009
Tumor
0.0
CPT0092290003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0078840001
Normal
-0.1
CPT0001510001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0065820001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0063330001
Normal
-0.4
CPT0086370003
Normal
-0.4
CPT0025050003
Tumor
-0.4
CPT0001220008
Tumor
-0.4
CPT0013790003
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0077500001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0066430001
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0020020001
Normal
-0.6
CPT0006530001
Normal
-0.6
CPT0021240003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0065750003
Tumor
-0.7
CPT0009000003
Tumor
-0.8
CPT0079180003
Tumor
-0.8
CPT0014130001
Normal
-0.8
CPT0017450001
Normal
-0.8
CPT0012920003
Normal
-0.8
CPT0092310003
Normal
-0.8
CPT0012770003
Normal
-0.9
CPT0009080003
Normal
-0.9
CPT0024680001
Normal
-0.9
CPT0012550003
Tumor
-0.9
CPT0001180009
Tumor
-1.0
CPT0082010001
Normal
-1.0
CPT0088970003
Tumor
-1.0
CPT0001190001
Normal
-1.0
CPT0015810003
Tumor
-1.0
CPT0025230003
Tumor
-1.1
CPT0001230001
Normal
-1.5
CPT0024670003
Tumor
-1.6
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0079410003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
