HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:36.7 nTPM
HPA Brain:46.5 nTPM
GTEx:36.7 nTPM
FANTOM5:56.7 Scaled Tags Per Million
Pig:112.5 nTPM
Mouse:19.7 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041032
Glial cells Low
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 46.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
2148 Female, age 91, left hemisphere 49.2
1855 Male, age 76, left hemisphere 39.8
2529 Female, age 94, left hemisphere 37.9
2621 Female, age 67, right hemisphere 36.3
1898 Male, age 80, left hemisphere 35.7
1911 Female, age 85, right hemisphere 32.0
Dentate gyrus
nTPM: 42.2
1927 Female, age 91, both hemispheres 62.0
2531 Female, age 67, both hemispheres 46.7
2010 Male, age 76, both hemispheres 42.8
2530 Female, age 94, left hemisphere 39.5
2246 Female, age 85, both hemispheres 32.6
2528 Male, age 74, both hemispheres 29.7
Entorhinal gyrus
nTPM: 41.3
2613 Female, age 94, left hemisphere 56.2
1787 Male, age 76, left hemisphere 49.9
2764 Male, age 80, right hemisphere 49.7
1938 Female, age 85, left hemisphere 37.7
2686 Male, age 75, right hemisphere 28.0
2117 Female, age 91, right hemisphere 26.5
Hippocampus, CA1
nTPM: 43.5
2749 Male, age 80, left hemisphere 76.8
2045 Male, age 76, both hemispheres 43.3
2082 Female, age 91, right hemisphere 37.4
2527 Male, age 74, both hemispheres 33.9
1873 Female, age 85, both hemispheres 26.2
Hippocampus, CA2
nTPM: 36.1
1963 Male, age 80, left hemisphere 41.0
1892 Male, age 76, both hemispheres 40.4
1940 Female, age 85, left hemisphere 39.0
2113 Female, age 91, right hemisphere 36.5
2437 Female, age 94, left hemisphere 31.4
2249 Male, age 74, both hemispheres 28.6
Hippocampus, CA3
nTPM: 39.2
2137 Male, age 80, left hemisphere 56.4
2620 Female, age 94, left hemisphere 55.0
1867 Male, age 76, both hemispheres 43.0
2861 Female, age 67, both hemispheres 37.4
2436 Male, age 74, both hemispheres 22.4
1891 Female, age 85, both hemispheres 20.9
Parahippocampal cortex
nTPM: 39.2
2245 Female, age 91, both hemispheres 58.2
2250 Female, age 67, right hemisphere 46.4
2018 Male, age 76, both hemispheres 44.2
1990 Female, age 91, right hemisphere 43.8
2622 Female, age 67, right hemisphere 42.0
1933 Female, age 85, both hemispheres 37.5
1850 Male, age 80, both hemispheres 36.5
2532 Female, age 72, left hemisphere 31.1
2693 Female, age 94, both hemispheres 30.8
2692 Male, age 74, both hemispheres 21.4
Perirhinal gyrus
nTPM: 46.5
1794 Male, age 80, right hemisphere 56.6
1847 Female, age 91, left hemisphere 56.1
2521 Female, age 94, right hemisphere 52.2
1841 Female, age 85, right hemisphere 36.3
2848 Male, age 76, right hemisphere 31.4
Subiculum
nTPM: 30.3
1977 Female, age 85, both hemispheres 36.1
1901 Male, age 80, both hemispheres 34.9
2042 Male, age 76, both hemispheres 30.7
2729 Female, age 91, right hemisphere 30.2
2619 Male, age 74, both hemispheres 27.8
2438 Female, age 94, left hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 112.5
Min nTPM: 0.7
Std nTPM: 23.1
Median nTPM: 34.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 112.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 106.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 103.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 102.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 96.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 93.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 85.2
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 83.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 79.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 76.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 74.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.7
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 112.5
Pig sample Sample description nTPM
Subiculum
nTPM: 67.3
Samples: 4

Max nTPM: 88.7
Min nTPM: 57.1
Sample A Female 88.7
Sample B Female 63.7
Sample C Male 59.6
Sample D Male 57.1
Dorsal hippocampus
nTPM: 56.6
Samples: 4

Max nTPM: 65.7
Min nTPM: 47.5
Sample A Female 52.4
Sample B Female 60.9
Sample C Male 47.5
Sample D Male 65.7
Entorhinal cortex
nTPM: 112.5
Samples: 4

Max nTPM: 118.5
Min nTPM: 104.9
Sample A Female 117.6
Sample B Female 108.9
Sample C Male 118.5
Sample D Male 104.9
Ventral hippocampus
nTPM: 50.4
Samples: 4

Max nTPM: 60.2
Min nTPM: 40.8
Sample A Female 41.5
Sample B Female 40.8
Sample C Male 60.2
Sample D Male 59.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 29.6
Min nTPM: 12.6
Sample A Male 21.1
Sample B Male 29.6
Sample C Female 12.6
Sample D Female 15.3
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 18.5
Min nTPM: 9.9
Sample A Male 10.6
Sample B Male 16.5
Sample C Female 9.9
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
75198148 Antisense, RP_060502_02_A09, Mouse strain C57BL/6J (56 days, male) 9.5

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