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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPSAB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
114.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
9.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
4.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
2.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
2.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPSAB1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
228.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
101.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
101.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
92.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
90.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
89.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
85.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
84.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
84.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
83.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
82.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
78.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
76.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
76.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
74.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
68.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
68.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
67.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
67.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
66.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
63.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
63.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
62.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
62.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
60.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
58.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
56.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
56.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
56.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
55.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
53.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
52.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
52.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
52.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
50.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
50.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
49.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
49.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
49.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
48.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
48.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
48.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
48.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
47.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
47.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
47.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
46.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
46.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
46.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
46.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
45.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
45.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
44.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
43.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
43.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
42.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
42.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
42.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
41.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
41.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
40.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
39.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
39.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
38.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
38.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
38.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
38.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
38.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
38.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
37.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
37.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
37.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
37.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
36.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
36.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
36.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
36.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
36.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
36.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
35.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
35.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
35.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
35.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
35.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
34.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
34.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
34.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
34.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
33.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
33.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
32.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
31.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
31.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
31.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
31.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
31.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
31.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
31.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
31.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
30.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
30.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
30.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
29.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
28.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
28.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
27.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
27.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
27.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
27.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
26.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
26.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
26.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
26.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
25.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
24.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
24.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
24.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
24.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
24.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
24.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
23.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
23.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
23.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
22.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
21.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
21.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
21.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
20.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
20.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
19.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
19.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
19.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
19.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
19.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
18.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
17.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
17.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
16.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
16.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
16.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
16.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
16.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
16.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
16.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
15.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
15.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
14.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
13.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
13.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
13.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
13.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
13.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
12.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
12.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
12.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
12.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
11.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
11.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
10.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
10.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
10.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
10.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
9.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
9.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
9.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
9.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
8.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
8.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
8.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
7.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
7.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
7.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
7.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
7.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
7.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
7.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
6.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
6.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
6.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
5.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
5.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
4.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
4.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
4.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
4.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
4.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
4.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
4.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
4.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
3.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
3.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
3.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
3.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
2.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
2.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
2.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
2.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
2.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
2.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
2.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
1.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
1.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
1.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
1.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
1.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
1.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
0.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
0.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
0.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
0.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
0.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
0.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
0.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
0.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPSAB1 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
54.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
47.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
47.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
38.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
33.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
33.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
28.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
25.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
21.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
20.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
16.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
15.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
14.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
12.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
11.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
11.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
11.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
10.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
9.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
9.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
7.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
7.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
6.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
6.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
6.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
6.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
5.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
4.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
4.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
3.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
3.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
3.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
2.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
2.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
2.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
2.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
2.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
1.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
1.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
1.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
1.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
1.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
0.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
0.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
0.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
0.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
0.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
0.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TPSAB1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
342.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
263.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
246.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
246.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
235.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
210.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
191.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
185.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
179.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
171.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
158.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
157.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
156.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
153.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
143.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
142.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
139.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
134.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
133.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
132.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
130.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
130.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
126.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
113.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
112.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
109.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
109.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
107.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
94.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
90.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
89.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
85.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
84.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
84.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
79.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
77.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
76.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
73.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
72.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
69.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
68.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
67.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
67.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
65.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
63.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
62.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
60.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
60.3
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
59.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
58.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
57.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
57.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
55.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
55.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
55.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
54.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
52.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
52.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
52.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
50.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
49.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
47.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
47.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
47.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
47.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
45.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
44.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
42.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
42.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
41.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
41.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
41.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
41.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
39.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
37.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
35.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
35.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
34.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
34.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
33.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
31.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
30.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
30.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
29.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
29.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
29.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
28.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
28.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
27.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
27.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
27.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
26.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
25.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
24.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
24.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
21.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
21.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
20.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
18.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
17.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
16.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
15.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
15.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
14.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
14.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
14.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
13.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
12.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
11.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
9.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
9.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
9.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
9.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
8.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
6.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
6.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
6.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
6.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
5.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
5.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
5.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
5.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
4.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
4.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
4.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
4.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
3.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
3.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
2.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
2.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
2.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
2.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
2.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
2.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
2.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
1.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
1.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
1.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
0.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
0.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
0.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
0.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
0.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
0.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
0.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088760003
Tumor
2.6
CPT0079480003
Tumor
2.1
CPT0092730003
Tumor
1.9
CPT0011410003
Tumor
1.6
CPT0081600003
Tumor
1.4
CPT0066470004
Tumor
1.4
CPT0086870003
Tumor
1.4
CPT0088900003
Tumor
1.3
CPT0081990003
Tumor
1.3
CPT0010120001
Normal
1.2
CPT0077490003
Tumor
1.1
CPT0011240003
Tumor
1.1
CPT0085670003
Tumor
1.1
CPT0092190003
Normal
1.0
CPT0012080003
Tumor
1.0
CPT0089020003
Tumor
1.0
CPT0069190001
Normal
1.0
CPT0088630003
Tumor
0.9
CPT0014370004
Tumor
0.9
CPT0006630003
Tumor
0.8
CPT0014470001
Normal
0.8
CPT0025350003
Tumor
0.8
CPT0088570001
Normal
0.8
CPT0065690003
Tumor
0.8
CPT0086030003
Tumor
0.8
CPT0001270001
Normal
0.7
CPT0010160003
Tumor
0.7
CPT0012550003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0013790003
Normal
0.6
CPT0079230003
Tumor
0.6
CPT0065870003
Tumor
0.6
CPT0065930003
Tumor
0.6
CPT0077320001
Normal
0.6
CPT0086360003
Tumor
0.6
CPT0088920001
Normal
0.6
CPT0079410003
Tumor
0.6
CPT0025060001
Normal
0.5
CPT0075720003
Tumor
0.5
CPT0065820001
Normal
0.5
CPT0063320003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0012290003
Normal
0.4
CPT0012920003
Normal
0.4
CPT0000640003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0015910003
Tumor
0.3
CPT0069000003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0012900004
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0014450004
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0009000003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0007320003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0006440003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0012090003
Normal
-0.2
CPT0021240003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0001220008
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0086820003
Tumor
-0.3
CPT0088480003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0075570001
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0064370003
Tumor
-0.4
CPT0009020003
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0012280003
Tumor
-0.4
CPT0002370001
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0079510001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0078940001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0088500001
Normal
-0.4
CPT0078990003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0089460004
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0001350001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0065750003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0018250001
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0078930003
Tumor
-0.6
CPT0069010001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0001340003
Tumor
-0.6
CPT0079380003
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0009080003
Normal
-0.7
CPT0088550004
Tumor
-0.7
CPT0088690003
Tumor
-0.7
CPT0086970003
Normal
-0.7
CPT0078510003
Tumor
-0.7
CPT0081880003
Tumor
-0.7
CPT0064400001
Normal
-0.7
CPT0001550001
Normal
-0.7
CPT0000660001
Normal
-0.7
CPT0009060003
Tumor
-0.7
CPT0001230001
Normal
-0.7
CPT0088640003
Normal
-0.7
CPT0079430001
Normal
-0.8
CPT0092310003
Normal
-0.8
CPT0063330001
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0088780001
Normal
-0.8
CPT0082010001
Normal
-0.8
CPT0025920001
Normal
-0.8
CPT0006530001
Normal
-0.8
CPT0006950001
Normal
-0.9
CPT0089040001
Normal
-0.9
CPT0020120003
Tumor
-0.9
CPT0063630003
Tumor
-0.9
CPT0084560003
Tumor
-0.9
CPT0065430003
Tumor
-0.9
CPT0078670001
Normal
-0.9
CPT0025050003
Tumor
-1.0
CPT0087050003
Normal
-1.0
CPT0086890003
Normal
-1.0
CPT0077110003
Tumor
-1.0
CPT0010170001
Normal
-1.0
CPT0012770003
Normal
-1.0
CPT0014160003
Tumor
-1.1
CPT0088710001
Normal
-1.1
CPT0007870001
Normal
-1.1
CPT0015730003
Tumor
-1.2
CPT0023350003
Tumor
-1.2
CPT0076330003
Tumor
-1.2
CPT0078800003
Tumor
-1.2
CPT0001510001
Normal
-1.3
CPT0012180003
Tumor
-1.3
CPT0065810003
Tumor
-1.3
CPT0020020001
Normal
-1.3
CPT0026410003
Tumor
-1.3
CPT0024670003
Tumor
-1.4
CPT0017450001
Normal
-1.4
CPT0063640001
Normal
-1.4
CPT0023710001
Normal
-1.4
CPT0001180009
Tumor
-1.4
CPT0089480003
Normal
-1.4
CPT0000790001
Normal
-1.5
CPT0026420001
Normal
-1.5
CPT0078660003
Tumor
-1.6
CPT0066430001
Normal
-1.6
CPT0001500009
Tumor
-1.7
CPT0086950003
Tumor
-1.7
CPT0065450001
Normal
-1.8
CPT0088970003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.