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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
57.7
nTPM
HPA Brain:
75.0
nTPM
GTEx:
57.7
nTPM
FANTOM5:
230.9
Scaled Tags Per Million
Pig:
39.6
nTPM
Mouse:
51.2
nTPM
Allen mouse:
2.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.0
Sample id
Sample description
nTPM
Amygdala nTPM: 75.0
1987
Female, age 91, left hemisphere
93.9
2514
Male, age 75, right hemisphere
83.8
2695
Female, age 67, right hemisphere
76.4
2517
Female, age 94, left hemisphere
66.9
2814
Male, age 76, right hemisphere
54.0
Basal amygdala nTPM: 60.6
2609
Male, age 75, right hemisphere
88.9
1955
Male, age 76, both hemispheres
71.4
2110
Male, age 80, left hemisphere
60.8
2243
Female, age 91, right hemisphere
59.6
2685
Female, age 94, left hemisphere
48.4
2827
Female, age 67, right hemisphere
34.7
Central amygdala nTPM: 63.4
2515
Male, age 75, right hemisphere
72.4
2239
Male, age 80, left hemisphere
65.6
2826
Female, age 94, left hemisphere
61.6
2701
Female, age 91, right hemisphere
60.0
1905
Male, age 76, both hemispheres
57.4
Corticomedial amygdala nTPM: 64.9
2428
Male, age 75, right hemisphere
84.5
2242
Female, age 91, right hemisphere
81.4
2240
Male, age 76, both hemispheres
67.1
2829
Male, age 80, left hemisphere
64.4
2429
Female, age 94, left hemisphere
49.2
2535
Female, age 67, right hemisphere
43.0
Lateral amygdala nTPM: 58.3
2516
Male, age 75, right hemisphere
78.4
2256
Male, age 80, left hemisphere
65.7
2255
Female, age 91, right hemisphere
61.0
1883
Male, age 76, both hemispheres
58.4
2534
Female, age 94, left hemisphere
49.8
2830
Female, age 67, right hemisphere
36.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
57.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 57.7
Samples: 152
Max nTPM: 169.1
Min nTPM: 2.6
Std nTPM: 28.5
Median nTPM: 53.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
169.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
135.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
127.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
119.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
118.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
115.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
115.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
113.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
112.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
108.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
104.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
104.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
100.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
100.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
97.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
96.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
96.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
94.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
93.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
93.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
88.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
87.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
86.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
86.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
85.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
85.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
85.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
84.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
83.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
82.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
82.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
81.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
78.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
75.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
75.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
74.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
73.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
73.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
72.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
72.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
71.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
70.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
70.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
69.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
69.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
68.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
68.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
68.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
68.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
67.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
66.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
65.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
65.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
63.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
63.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
61.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
61.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
60.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
59.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
59.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
59.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
58.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
58.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
56.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
55.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
55.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
55.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
55.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
54.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
54.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
53.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
53.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
52.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
52.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
52.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
52.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
52.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
51.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
51.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
50.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
49.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
49.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
49.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
49.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
49.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
48.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
48.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
48.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
47.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
47.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
47.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
46.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
46.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
46.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
46.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
45.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
43.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
42.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
42.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
38.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
37.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
36.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
36.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
36.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
35.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
34.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
34.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
34.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
34.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
33.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
33.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
32.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
31.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
31.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
31.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
30.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
28.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
27.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
27.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
26.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
26.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
25.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
24.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
23.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
23.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
23.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
20.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
20.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
20.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
19.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
18.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
13.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
12.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
10.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
2.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
51.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 51.2
Samples: 4
Max nTPM: 56.1
Min nTPM: 44.9
Sample A
Male
44.9
Sample B
Male
47.9
Sample C
Female
56.0
Sample D
Female
56.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.