HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.7 nTPM
HPA Brain:38.5 nTPM
GTEx:11.7 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:6.0 nTPM
Mouse:8.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
2529 Female, age 94, left hemisphere 44.7
1911 Female, age 85, right hemisphere 40.9
1855 Male, age 76, left hemisphere 39.7
1898 Male, age 80, left hemisphere 36.5
2148 Female, age 91, left hemisphere 36.1
2621 Female, age 67, right hemisphere 33.1
Dentate gyrus
nTPM: 34.8
2010 Male, age 76, both hemispheres 37.3
2530 Female, age 94, left hemisphere 36.6
2528 Male, age 74, both hemispheres 36.2
2246 Female, age 85, both hemispheres 35.3
2531 Female, age 67, both hemispheres 32.8
1927 Female, age 91, both hemispheres 30.8
Entorhinal gyrus
nTPM: 33.1
2117 Female, age 91, right hemisphere 37.9
1787 Male, age 76, left hemisphere 35.4
1938 Female, age 85, left hemisphere 32.9
2613 Female, age 94, left hemisphere 31.1
2686 Male, age 75, right hemisphere 30.6
2764 Male, age 80, right hemisphere 30.6
Hippocampus, CA1
nTPM: 33.3
2082 Female, age 91, right hemisphere 40.4
2527 Male, age 74, both hemispheres 33.7
1873 Female, age 85, both hemispheres 32.2
2749 Male, age 80, left hemisphere 31.2
2045 Male, age 76, both hemispheres 28.7
Hippocampus, CA2
nTPM: 34.6
2113 Female, age 91, right hemisphere 38.5
1963 Male, age 80, left hemisphere 36.9
2437 Female, age 94, left hemisphere 34.2
1940 Female, age 85, left hemisphere 33.9
2249 Male, age 74, both hemispheres 32.8
1892 Male, age 76, both hemispheres 31.5
Hippocampus, CA3
nTPM: 36.2
2861 Female, age 67, both hemispheres 39.6
1867 Male, age 76, both hemispheres 37.6
2436 Male, age 74, both hemispheres 35.5
2620 Female, age 94, left hemisphere 35.4
2137 Male, age 80, left hemisphere 35.0
1891 Female, age 85, both hemispheres 33.9
Parahippocampal cortex
nTPM: 30.4
2692 Male, age 74, both hemispheres 34.9
2622 Female, age 67, right hemisphere 33.9
2018 Male, age 76, both hemispheres 33.8
1933 Female, age 85, both hemispheres 32.1
2245 Female, age 91, both hemispheres 31.1
1990 Female, age 91, right hemisphere 29.3
2250 Female, age 67, right hemisphere 28.5
2532 Female, age 72, left hemisphere 28.3
1850 Male, age 80, both hemispheres 26.2
2693 Female, age 94, both hemispheres 25.7
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 27.7
2521 Female, age 94, right hemisphere 27.7
1794 Male, age 80, right hemisphere 27.6
2848 Male, age 76, right hemisphere 26.4
1841 Female, age 85, right hemisphere 25.9
Subiculum
nTPM: 34.5
2042 Male, age 76, both hemispheres 40.2
2729 Female, age 91, right hemisphere 36.9
2619 Male, age 74, both hemispheres 36.2
1901 Male, age 80, both hemispheres 33.2
1977 Female, age 85, both hemispheres 30.7
2438 Female, age 94, left hemisphere 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 19.7
Min nTPM: 4.6
Std nTPM: 2.5
Median nTPM: 11.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 19.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 18.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 18.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 17.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 17.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 16.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.8
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 16.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 16.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 16.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 6.0
Pig sample Sample description nTPM
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.1
Sample A Female 6.5
Sample B Female 5.1
Sample C Male 5.2
Sample D Male 5.6
Dorsal hippocampus
nTPM: 6.0
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.2
Sample A Female 7.0
Sample B Female 5.4
Sample C Male 6.3
Sample D Male 5.2
Entorhinal cortex
nTPM: 5.1
Samples: 4

Max nTPM: 5.5
Min nTPM: 4.7
Sample A Female 5.5
Sample B Female 5.0
Sample C Male 5.2
Sample D Male 4.7
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 7.4
Min nTPM: 4.5
Sample A Female 5.7
Sample B Female 4.5
Sample C Male 7.4
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.8
Sample A Male 8.2
Sample B Male 9.0
Sample C Female 7.8
Sample D Female 8.2
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 8.2
Min nTPM: 7.6
Sample A Male 8.2
Sample B Male 8.2
Sample C Female 7.9
Sample D Female 7.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74059211 Antisense, RP_051121_03_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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