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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMB2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
84.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
78.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
77.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
76.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
76.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
66.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
66.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
65.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
61.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
61.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
60.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
60.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
59.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
57.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
53.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
52.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
50.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
50.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
49.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
48.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
47.9
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
47.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
46.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
46.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
46.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
45.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
45.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
44.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
44.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
42.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
42.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
41.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
40.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
40.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
40.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
40.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
40.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
40.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
40.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
40.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
40.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
39.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
39.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
38.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
38.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
38.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
38.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
38.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
38.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
37.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
37.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
37.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
37.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
37.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
36.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
36.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
36.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
35.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
35.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
35.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
35.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
35.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
35.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
34.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
34.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
34.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
34.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
34.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
34.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
33.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
33.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
33.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
33.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
33.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
33.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
33.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
32.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
32.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
32.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
32.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
31.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
31.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
31.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
30.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
30.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
30.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
30.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
29.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
29.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
29.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
29.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
29.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
29.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
27.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
27.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
27.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
27.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
26.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
26.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
26.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
26.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
26.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
26.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
26.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
25.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
25.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
25.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
25.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
25.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
25.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
24.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
24.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
24.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
24.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
24.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
24.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
24.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
24.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
24.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
24.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
24.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
24.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
23.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
22.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
22.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
22.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
22.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
22.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
22.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
21.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
21.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
21.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
21.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
21.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
21.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
21.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
21.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
21.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
21.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
21.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
20.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
20.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
20.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
20.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
20.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
20.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
20.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
19.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
19.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
19.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
19.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
19.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
19.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
19.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
18.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
18.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
18.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
18.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
17.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
17.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
17.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
16.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.7
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
16.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
16.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
16.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
16.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
16.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
15.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
15.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
15.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
15.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
14.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
14.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
14.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
14.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
13.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
13.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
13.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
13.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
13.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
13.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
13.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
13.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
13.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
12.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
11.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
10.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
10.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
9.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
9.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
9.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
9.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
9.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
9.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
8.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
8.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
8.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
7.6
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
7.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
5.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
5.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
5.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
3.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
1.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.6
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LAMB2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.0
Number of samples
231
Samples
Sample
Description
TPM
DO45189
0 years, female, NA, stage:2, alive, 1200 days
118.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
104.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
94.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
76.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
75.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
72.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
67.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
67.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
59.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
58.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
58.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
58.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
58.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
57.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
56.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
56.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
54.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
53.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
53.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
51.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
51.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
50.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
50.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
49.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
48.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
48.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
48.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
48.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
48.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
46.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
45.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
45.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
44.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
43.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
43.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
43.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
42.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
42.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
42.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
42.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
42.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
41.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
41.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
40.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
40.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
40.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
39.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
39.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
39.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
38.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
38.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
38.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
38.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
38.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
38.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
38.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
37.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
37.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
37.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
36.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
36.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
35.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
35.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
35.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
35.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
35.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
35.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
34.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
34.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
34.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
34.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
33.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
33.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
33.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
33.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
33.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
33.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
32.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
32.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
32.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
32.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
32.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
32.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
31.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
30.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
30.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
30.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
30.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
30.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
29.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
29.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
29.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
29.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
29.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
29.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
29.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
29.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
28.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
28.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
28.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
27.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
27.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
27.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
26.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
26.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
26.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
26.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
26.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
25.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
25.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
25.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
25.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
24.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
24.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
24.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
24.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
23.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
23.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
23.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
23.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
23.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
23.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.8
DO48751
0 years, male, NA, stage:2, dead, 480 days
23.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
23.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
23.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
23.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
22.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
22.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
22.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
22.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
22.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
22.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
21.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
21.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
21.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
21.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
20.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
20.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
20.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
20.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
19.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
19.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
19.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
19.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.7
DO48682
0 years, female, NA, stage:3, dead, 120 days
18.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
18.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
18.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
18.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
18.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
18.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
17.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
17.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
17.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
17.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
17.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
16.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
16.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
16.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
16.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
16.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
15.7
DO227643
0 years, male, NA, stage:2, alive, 1260 days
15.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
15.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
15.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
14.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
14.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
14.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
14.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
13.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.2
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
12.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
12.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
11.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
11.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
10.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
10.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
9.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
9.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
9.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
8.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
8.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
5.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
915
Tumor
1.7
715
Tumor
1.6
171
Tumor
1.6
192
Normal
1.4
911
Tumor
1.3
685
Tumor
1.3
981
Tumor
1.0
231
Tumor
1.0
483
Tumor
0.9
823
Tumor
0.9
146
Normal
0.9
451
Tumor
0.8
327
Tumor
0.8
1015
Tumor
0.8
131
Tumor
0.8
261
Tumor
0.7
492
Normal
0.7
444
Normal
0.7
354
Normal
0.7
461
Tumor
0.7
916
Normal
0.7
185
Tumor
0.6
465
Tumor
0.6
268
Normal
0.6
297
Tumor
0.6
672
Normal
0.6
188
Normal
0.6
384
Normal
0.6
538
Normal
0.6
421
Tumor
0.6
958
Normal
0.6
312
Normal
0.5
744
Normal
0.5
362
Normal
0.5
455
Tumor
0.5
386
Normal
0.5
471
Tumor
0.5
126
Normal
0.5
498
Normal
0.5
874
Normal
0.5
741
Tumor
0.5
1044
Normal
0.5
977
Tumor
0.5
137
Tumor
0.4
1046
Normal
0.4
472
Normal
0.4
224
Normal
0.4
627
Tumor
0.4
572
Normal
0.4
311
Tumor
0.4
513
Tumor
0.4
473
Tumor
0.4
364
Normal
0.4
563
Tumor
0.4
352
Normal
0.4
392
Normal
0.4
665
Tumor
0.4
343
Tumor
0.4
161
Tumor
0.3
574
Normal
0.3
218
Normal
0.3
777
Tumor
0.3
394
Normal
0.3
195
Tumor
0.3
1025
Tumor
0.3
396
Normal
0.3
478
Normal
0.3
1041
Tumor
0.3
868
Normal
0.3
462
Normal
0.3
148
Normal
0.3
881
Tumor
0.3
464
Normal
0.3
278
Normal
0.3
414
Normal
0.3
618
Normal
0.3
664
Normal
0.3
228
Normal
0.3
162
Normal
0.3
186
Normal
0.3
514
Normal
0.2
448
Normal
0.2
416
Normal
0.2
412
Normal
0.2
172
Normal
0.2
1032
Normal
0.2
963
Tumor
0.2
427
Tumor
0.2
742
Normal
0.2
867
Tumor
0.2
446
Normal
0.2
516
Normal
0.2
982
Normal
0.2
422
Normal
0.2
466
Normal
0.2
968
Normal
0.2
976
Normal
0.2
816
Normal
0.2
666
Normal
0.2
424
Normal
0.2
368
Normal
0.2
361
Tumor
0.2
884
Normal
0.2
342
Normal
0.2
212
Normal
0.2
314
Normal
0.2
434
Normal
0.2
214
Normal
0.2
524
Normal
0.2
331
Tumor
0.2
877
Tumor
0.2
882
Normal
0.2
415
Tumor
0.2
284
Normal
0.2
222
Normal
0.2
365
Tumor
0.2
332
Normal
0.2
814
Normal
0.1
648
Normal
0.1
862
Normal
0.1
1022
Normal
0.1
141
Tumor
0.1
536
Normal
0.1
786
Normal
0.1
484
Normal
0.1
124
Normal
0.1
515
Tumor
0.1
272
Normal
0.1
662
Normal
0.1
395
Tumor
0.1
546
Normal
0.1
298
Normal
0.1
477
Tumor
0.1
344
Normal
0.1
883
Tumor
0.1
187
Tumor
0.1
388
Normal
0.1
358
Normal
0.1
196
Normal
0.1
918
Normal
0.1
262
Normal
0.1
984
Normal
0.1
474
Normal
0.1
557
Tumor
0.1
864
Normal
0.1
558
Normal
0.1
138
Normal
0.1
956
Normal
0.1
363
Tumor
0.1
878
Normal
0.1
628
Normal
0.0
428
Normal
0.0
924
Normal
0.0
411
Tumor
0.0
636
Normal
0.0
647
Tumor
0.0
136
Normal
0.0
716
Normal
0.0
376
Normal
0.0
671
Tumor
0.0
912
Normal
0.0
456
Normal
0.0
922
Normal
0.0
132
Normal
0.0
545
Tumor
0.0
366
Normal
0.0
1045
Tumor
0.0
328
Normal
0.0
824
Normal
0.0
482
Normal
0.0
1042
Normal
0.0
145
Tumor
0.0
964
Normal
0.0
423
Tumor
0.0
818
Normal
0.0
258
Normal
0.0
191
Tumor
0.0
756
Normal
0.0
355
Tumor
0.0
534
Normal
0.0
642
Normal
0.0
526
Normal
0.0
525
Tumor
0.0
436
Normal
0.0
426
Normal
0.0
431
Tumor
0.0
641
Tumor
0.0
921
Tumor
0.0
866
Normal
0.0
356
Normal
0.0
978
Normal
0.0
111
Normal
0.0
528
Normal
-0.1
432
Normal
-0.1
1016
Normal
-0.1
615
Tumor
-0.1
954
Normal
-0.1
686
Normal
-0.1
914
Normal
-0.1
698
Normal
-0.1
852
Normal
-0.1
938
Normal
-0.1
213
Tumor
-0.1
713
Tumor
-0.1
926
Normal
-0.1
383
Tumor
-0.1
858
Normal
-0.1
518
Normal
-0.1
142
Normal
-0.1
452
Normal
-0.1
468
Normal
-0.1
975
Tumor
-0.1
135
Tumor
-0.1
944
Normal
-0.1
554
Normal
-0.1
568
Normal
-0.1
257
Tumor
-0.1
722
Normal
-0.1
714
Normal
-0.1
494
Normal
-0.1
917
Tumor
-0.1
491
Tumor
-0.2
728
Normal
-0.2
785
Tumor
-0.2
1014
Normal
-0.2
223
Tumor
-0.2
863
Tumor
-0.2
696
Normal
-0.2
353
Tumor
-0.2
277
Tumor
-0.2
445
Tumor
-0.2
232
Normal
-0.2
861
Tumor
-0.2
564
Normal
-0.2
925
Tumor
-0.2
447
Tumor
-0.2
286
Normal
-0.2
746
Normal
-0.2
697
Tumor
-0.2
1026
Normal
-0.2
114
Normal
-0.2
723
Tumor
-0.2
616
Normal
-0.3
217
Tumor
-0.3
952
Normal
-0.3
738
Normal
-0.3
127
Tumor
-0.3
147
Tumor
-0.3
433
Tumor
-0.3
1028
Normal
-0.3
517
Tumor
-0.3
488
Normal
-0.3
857
Tumor
-0.3
123
Tumor
-0.3
813
Tumor
-0.3
128
Normal
-0.4
778
Normal
-0.4
913
Tumor
-0.4
943
Tumor
-0.4
743
Tumor
-0.4
443
Tumor
-0.4
357
Tumor
-0.4
721
Tumor
-0.4
341
Tumor
-0.4
1031
Tumor
-0.4
553
Tumor
-0.4
227
Tumor
-0.4
617
Tumor
-0.4
493
Tumor
-0.5
221
Tumor
-0.5
393
Tumor
-0.5
966
Normal
-0.5
435
Tumor
-0.5
112
Tumor
-0.5
481
Tumor
-0.5
817
Tumor
-0.5
113
Tumor
-0.5
463
Tumor
-0.6
1013
Tumor
-0.6
533
Tumor
-0.6
755
Tumor
-0.6
873
Tumor
-0.6
965
Tumor
-0.6
923
Tumor
-0.6
367
Tumor
-0.6
387
Tumor
-0.6
375
Tumor
-0.6
523
Tumor
-0.7
467
Tumor
-0.7
571
Tumor
-0.7
271
Tumor
-0.7
957
Tumor
-0.7
955
Tumor
-0.7
267
Tumor
-0.7
535
Tumor
-0.7
695
Tumor
-0.7
313
Tumor
-0.7
391
Tumor
-0.8
385
Tumor
-0.8
1021
Tumor
-0.8
425
Tumor
-0.8
413
Tumor
-0.8
211
Tumor
-0.8
937
Tumor
-0.9
745
Tumor
-0.9
1043
Tumor
-0.9
727
Tumor
-0.9
567
Tumor
-0.9
537
Tumor
-0.9
951
Tumor
-0.9
737
Tumor
-1.0
635
Tumor
-1.0
1027
Tumor
-1.0
527
Tumor
-1.0
953
Tumor
-1.1
497
Tumor
-1.1
487
Tumor
-1.1
663
Tumor
-1.1
125
Tumor
-1.2
351
Tumor
-1.2
573
Tumor
-1.2
983
Tumor
-1.2
661
Tumor
-1.2
815
Tumor
-1.2
724
Normal
-1.3
967
Tumor
-1.4
283
Tumor
-1.4
865
Tumor
-1.4
285
Tumor
-1.5
851
Tumor
-1.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
