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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS7 is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: 1.96
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
0.017
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
66%
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
63%
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1176.7
Number of samples
283
Samples
Sample
Description
TPM
TCGA-C5-A8YQ-01A
79 years, female, white, stage:Stage IB, dead, 715 days
5261.8
TCGA-LP-A5U2-01A
30 years, female, asian, stage:Stage IIIB, alive, 9 days
4273.3
TCGA-Q1-A73S-01A
33 years, female, white, stage:Stage IB, alive, 688 days
3982.9
TCGA-EK-A2PM-01A
81 years, female, white, stage:Stage IIB, alive, 18 days
3930.3
TCGA-C5-A2LT-01A
38 years, female, white, stage:Stage IB, alive, 2226 days
3388.7
TCGA-DS-A1OA-01A
77 years, female, asian, stage:Stage IB, dead, 879 days
3380.1
TCGA-EK-A3GJ-01A
51 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
3053.5
TCGA-IR-A3LA-01A
60 years, female, white, stage:Stage IB, alive, 4172 days
3029.2
TCGA-DG-A2KH-01A
25 years, female, stage:Stage IB, alive, 34 days
2887.9
TCGA-EA-A5FO-01A
59 years, female, white, stage:Stage IB, alive, 815 days
2856.1
TCGA-EK-A2H0-01A
24 years, female, white, stage:Stage IIB, alive, 1847 days
2831.3
TCGA-EK-A2RK-01A
67 years, female, white, stage:Stage IA, alive, 13 days
2802.6
TCGA-EK-A2RM-01A
40 years, female, white, stage:Stage IB, alive, 50 days
2795.9
TCGA-EK-A2PG-01A
88 years, female, black or african american, stage:'--, alive, 46 days
2692.2
TCGA-MA-AA3Z-01A
43 years, female, white, stage:Stage IB, alive, 595 days
2659.8
TCGA-VS-A9V4-01A
63 years, female, white, stage:Stage IVA, dead, 132 days
2635.8
TCGA-EA-A4BA-01A
49 years, female, white, stage:Stage IB, alive, 755 days
2627.4
TCGA-FU-A3HY-01A
47 years, female, white, stage:Stage IB, alive, 954 days
2611.1
TCGA-C5-A1M9-01A
46 years, female, white, stage:Stage IB, dead, 1065 days
2562.3
TCGA-C5-A7UH-01A
55 years, female, white, stage:Stage IIIB, alive, 3988 days
2499.6
TCGA-EK-A2R9-01A
58 years, female, white, stage:Stage IB, alive, 4 days
2470.0
TCGA-EK-A2H1-01A
20 years, female, white, stage:Stage IB, alive, 799 days
2458.5
TCGA-VS-A9UB-01A
54 years, female, stage:Stage IIB, alive, 911 days
2431.0
TCGA-C5-A1M8-01A
43 years, female, white, stage:Stage IB, alive, 919 days
2428.1
TCGA-HM-A6W2-01A
34 years, female, black or african american, stage:Stage IVB, alive, 287 days
2424.8
TCGA-EK-A2IR-01A
48 years, female, white, stage:Stage IB, alive, 3442 days
2407.2
TCGA-IR-A3LK-01A
69 years, female, white, stage:Stage IB, dead, 908 days
2395.6
TCGA-FU-A23L-01A
60 years, female, white, stage:Stage IIA, alive, 725 days
2391.0
TCGA-C5-A2M2-01A
56 years, female, white, stage:Stage IB, dead, 1011 days
2366.8
TCGA-EA-A3Y4-01A
40 years, female, white, stage:Stage IB, alive, 1122 days
2366.8
TCGA-C5-A1MF-01A
49 years, female, white, stage:Stage IB, alive, 1617 days
2235.6
TCGA-EA-A1QT-01A
47 years, female, white, stage:Stage IB, alive, 1243 days
2231.1
TCGA-VS-A94Y-01A
47 years, female, white, stage:Stage IIB, dead, 144 days
2183.7
TCGA-RA-A741-01A
34 years, female, white, stage:Stage IIB, alive, 444 days
2180.6
TCGA-EA-A3QD-01A
59 years, female, white, stage:Stage IIIB, alive, 397 days
2174.1
TCGA-JW-A5VK-01A
43 years, female, black or african american, stage:Stage IB, alive, 623 days
2165.2
TCGA-VS-A9V3-01A
62 years, female, white, stage:Stage IVB, alive, 540 days
2159.4
TCGA-Q1-A73Q-01A
46 years, female, white, stage:Stage I, alive, 284 days
2146.8
TCGA-JX-A5QV-01A
37 years, female, white, stage:Stage IB, alive, 636 days
2136.0
TCGA-WL-A834-01A
57 years, female, white, stage:'--, alive, 791 days
2114.4
TCGA-BI-A0VS-01A
48 years, female, white, stage:Stage IB, alive, 1735 days
2093.1
TCGA-2W-A8YY-01A
51 years, female, white, stage:Stage IB, alive, 533 days
2036.4
TCGA-VS-A9U7-01A
30 years, female, white, stage:Stage IB, alive, 1472 days
2032.0
TCGA-VS-A8EC-01A
55 years, female, white, stage:Stage IIIB, alive, 1415 days
2019.9
TCGA-DS-A0VL-01A
25 years, female, white, stage:Stage IB, dead, 1692 days
2007.9
TCGA-IR-A3LL-01A
60 years, female, white, stage:Stage IB, alive, 1106 days
2007.3
TCGA-Q1-A5R2-01A
64 years, female, white, stage:'--, alive, 499 days
2006.4
TCGA-C5-A8XK-01A
30 years, female, black or african american, stage:'--, alive, 3039 days
1983.6
TCGA-FU-A57G-01A
49 years, female, white, stage:Stage IB, alive, 1078 days
1982.1
TCGA-VS-A9UI-01A
76 years, female, white, stage:Stage IIB, dead, 1372 days
1971.8
TCGA-C5-A2M1-01A
37 years, female, white, stage:Stage IB, alive, 1169 days
1955.8
TCGA-C5-A8ZZ-01A
41 years, female, white, stage:Stage IIB, alive, 636 days
1954.4
TCGA-LP-A5U3-01A
40 years, female, asian, stage:Stage IB, alive, 25 days
1951.8
TCGA-JX-A3Q8-01A
40 years, female, asian, stage:Stage IB, alive, 1357 days
1938.6
TCGA-R2-A69V-01A
42 years, female, white, stage:Stage IB, alive, 596 days
1931.9
TCGA-C5-A7UC-01A
48 years, female, white, stage:Stage IB, dead, 523 days
1927.8
TCGA-EA-A44S-01A
31 years, female, white, stage:Stage IIIB, alive, 369 days
1922.8
TCGA-EK-A2R8-01A
48 years, female, white, stage:Stage IB, alive, 44 days
1916.6
TCGA-C5-A1M6-01A
55 years, female, white, stage:Stage IIB, dead, 955 days
1910.0
TCGA-MU-A5YI-01A
60 years, female, black or african american, stage:Stage IA, alive, 1053 days
1878.2
TCGA-VS-A8QH-01A
76 years, female, white, stage:Stage IB, dead, 1210 days
1870.5
TCGA-LP-A4AX-01A
45 years, female, asian, stage:Stage IB, alive, 380 days
1854.8
TCGA-MA-AA42-01A
75 years, female, white, stage:Stage IIB, alive, 259 days
1842.8
TCGA-C5-A7CG-01A
55 years, female, white, stage:Stage IB, alive, 6408 days
1841.9
TCGA-VS-A9UD-01A
73 years, female, white, stage:Stage IIIA, alive, 739 days
1830.3
TCGA-EA-A410-01A
51 years, female, white, stage:Stage IIA, alive, 803 days
1810.5
TCGA-BI-A20A-01A
49 years, female, white, stage:Stage IB, alive, 720 days
1792.4
TCGA-EA-A78R-01A
54 years, female, asian, stage:Stage IB, alive, 410 days
1789.7
TCGA-FU-A3WB-01A
43 years, female, white, stage:Stage IIA, alive, 491 days
1781.7
TCGA-VS-A8QF-01A
42 years, female, white, stage:Stage IIB, alive, 1800 days
1773.9
TCGA-EX-A69L-01A
41 years, female, asian, stage:Stage IB, alive, 602 days
1759.3
TCGA-ZJ-AAX4-01A
85 years, female, white, stage:Stage II, alive, 21 days
1758.9
TCGA-DS-A1OD-01A
49 years, female, white, stage:Stage IB, alive, 3874 days
1758.9
TCGA-VS-A8EK-01A
65 years, female, white, stage:Stage IVA, dead, 829 days
1754.2
TCGA-C5-A7CO-01A
68 years, female, white, stage:Stage IB, alive, 4482 days
1753.9
TCGA-EA-A50E-01A
45 years, female, asian, stage:Stage IVA, dead, 227 days
1746.5
TCGA-VS-A9UV-01A
74 years, female, stage:Stage IVA, dead, 104 days
1730.2
TCGA-C5-A1MN-01A
42 years, female, white, stage:Stage IIIB, dead, 1245 days
1716.0
TCGA-VS-A9UJ-01A
55 years, female, stage:Stage IIB, dead, 52 days
1699.8
TCGA-C5-A905-01A
37 years, female, black or african american, stage:Stage IB, alive, 4879 days
1691.6
TCGA-EK-A2RB-01A
48 years, female, white, stage:Stage IVB, alive, 9 days
1673.3
TCGA-Q1-A5R3-01A
56 years, female, white, stage:'--, alive, 485 days
1671.5
TCGA-MY-A5BF-01A
68 years, female, white, stage:Stage IIA, alive, 634 days
1670.5
TCGA-EX-A1H5-01A
58 years, female, black or african american, stage:Stage IIB, alive, 619 days
1665.5
TCGA-JW-A69B-01A
44 years, female, white, stage:Stage IB, alive, 863 days
1664.5
TCGA-EK-A3GN-01A
47 years, female, white, stage:Stage IIIB, alive, 27 days
1652.0
TCGA-EK-A2PK-01A
43 years, female, white, stage:Stage IB, alive, 12 days
1641.2
TCGA-FU-A40J-01A
38 years, female, white, stage:Stage IIIB, alive, 426 days
1634.7
TCGA-EA-A3HR-01A
57 years, female, white, stage:Stage II, alive, 940 days
1626.5
TCGA-VS-A950-01A
42 years, female, stage:Stage IIIA, alive, 1221 days
1620.0
TCGA-EK-A2RJ-01A
51 years, female, white, stage:Stage IB, alive, 53 days
1618.1
TCGA-DG-A2KK-01A
51 years, female, stage:Stage IIIB, alive, 2496 days
1611.3
TCGA-ZJ-A8QR-01A
38 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
1610.4
TCGA-C5-A8YT-01A
36 years, female, white, stage:Stage IB, dead, 633 days
1605.1
TCGA-DR-A0ZL-01A
53 years, female, asian, stage:Stage IB, alive, 2669 days
1597.7
TCGA-EX-A3L1-01A
32 years, female, white, stage:Stage IIA, alive, 463 days
1590.4
TCGA-DS-A3LQ-01A
46 years, female, stage:Stage IIIB, alive, 699 days
1576.4
TCGA-C5-A1MQ-01A
35 years, female, white, stage:Stage IIA, alive, 1031 days
1561.7
TCGA-EK-A3GK-01A
33 years, female, white, stage:Stage IB, alive, 15 days
1548.4
TCGA-MY-A5BE-01A
42 years, female, black or african american, stage:Stage IB, alive, 1066 days
1544.1
TCGA-VS-A9UC-01A
32 years, female, stage:Stage IIB, alive, 825 days
1543.2
TCGA-VS-A952-01A
66 years, female, white, stage:Stage IB, alive, 1778 days
1540.8
TCGA-MY-A913-01A
28 years, female, black or african american, stage:Stage IIA, alive, 524 days
1536.9
TCGA-4J-AA1J-01A
31 years, female, white, stage:Stage IB, alive, 542 days
1535.1
TCGA-DS-A7WF-01A
41 years, female, stage:Stage IB, dead, 492 days
1529.8
TCGA-VS-A9U6-01A
52 years, female, white, stage:Stage IVB, alive, 1320 days
1525.1
TCGA-Q1-A73R-01A
45 years, female, white, stage:Stage I, alive, 567 days
1514.4
TCGA-VS-A8Q9-01A
79 years, female, white, stage:Stage IB, alive, 1630 days
1513.8
TCGA-Q1-A73O-01A
37 years, female, stage:Stage IB, alive, 428 days
1504.3
TCGA-C5-A7XC-01A
26 years, female, white, stage:Stage IB, alive, 1551 days
1504.2
TCGA-ZX-AA5X-01A
64 years, female, white, stage:Stage IIIB, alive, 119 days
1494.9
TCGA-DS-A1OB-01A
45 years, female, white, stage:Stage IB, dead, 861 days
1494.5
TCGA-EK-A2RE-01A
26 years, female, white, stage:Stage IIA, alive, 57 days
1493.4
TCGA-VS-A953-01A
63 years, female, stage:Stage IVA, dead, 477 days
1490.5
TCGA-VS-A9UR-01A
53 years, female, white, stage:Stage IIA, alive, 793 days
1475.6
TCGA-DG-A2KL-01A
53 years, female, stage:Stage IIA, alive, 1367 days
1472.4
TCGA-IR-A3LB-01A
53 years, female, white, stage:Stage IB, dead, 2032 days
1468.7
TCGA-EK-A2GZ-01A
64 years, female, black or african american, stage:Stage IIIB, alive, 383 days
1468.0
TCGA-HM-A3JJ-01A
40 years, female, black or african american, stage:Stage IB, dead, 659 days
1464.3
TCGA-VS-A958-01A
46 years, female, white, stage:Stage IIB, alive, 1525 days
1463.8
TCGA-C5-A7UI-01A
42 years, female, black or african american, stage:Stage IB, dead, 2888 days
1461.9
TCGA-C5-A1MI-01A
50 years, female, white, stage:Stage IB, dead, 1083 days
1460.6
TCGA-C5-A8XH-01A
39 years, female, white, stage:Stage IB, dead, 1394 days
1446.4
TCGA-Q1-A6DW-01A
44 years, female, white, stage:Stage I, alive, 534 days
1445.8
TCGA-JW-A5VL-01A
37 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
1413.8
TCGA-DS-A0VM-01A
51 years, female, white, stage:Stage IB, alive, 3589 days
1409.1
TCGA-C5-A1MK-01A
79 years, female, white, stage:Stage IIIB, dead, 74 days
1407.1
TCGA-UC-A7PG-01A
44 years, female, white, stage:Stage IIIB, dead, 370 days
1382.0
TCGA-EA-A439-01A
50 years, female, asian, stage:Stage IIA, alive, 965 days
1380.2
TCGA-C5-A8XI-01A
69 years, female, black or african american, stage:Stage IB, alive, 254 days
1375.6
TCGA-EK-A2RL-01A
32 years, female, black or african american, stage:Stage IB, dead, 1453 days
1368.2
TCGA-LP-A4AU-01A
35 years, female, asian, stage:Stage IIIB, alive, 343 days
1357.7
TCGA-EK-A2RC-01A
33 years, female, stage:Stage IB, alive, 129 days
1355.4
TCGA-C5-A1BL-01A
32 years, female, white, stage:Stage IB, alive, 5271 days
1354.8
TCGA-EK-A2RO-01A
59 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
1346.4
TCGA-C5-A3HL-01A
76 years, female, white, stage:Stage IB, alive, 621 days
1345.0
TCGA-BI-A0VR-01A
53 years, female, white, stage:Stage IIIB, alive, 1505 days
1340.7
TCGA-DS-A5RQ-01A
80 years, female, white, stage:Stage IB, alive, 512 days
1331.3
TCGA-VS-A94Z-01A
38 years, female, white, stage:Stage IIB, alive, 1015 days
1330.3
TCGA-Q1-A6DV-01A
36 years, female, asian, stage:Stage IB, alive, 491 days
1311.6
TCGA-DS-A0VN-01A
47 years, female, white, stage:Stage IB, alive, 3609 days
1307.2
TCGA-VS-AA62-01A
51 years, female, white, stage:Stage IIB, dead, 469 days
1305.9
TCGA-EA-A5ZD-01A
40 years, female, asian, stage:Stage IB, alive, 830 days
1301.3
TCGA-JX-A3Q0-01A
63 years, female, black or african american, stage:Stage III, alive, 6375 days
1300.9
TCGA-VS-A9UY-01A
29 years, female, stage:Stage IVB, dead, 555 days
1298.0
TCGA-Q1-A73P-01A
45 years, female, white, stage:Stage IB, alive, 483 days
1290.5
TCGA-C5-A1MH-01A
71 years, female, white, stage:Stage IIIB, dead, 1186 days
1289.8
TCGA-EA-A6QX-01A
49 years, female, asian, stage:Stage IIIB, alive, 730 days
1271.3
TCGA-C5-A907-01A
47 years, female, white, stage:Stage IB, alive, 448 days
1271.1
TCGA-EA-A411-01A
50 years, female, white, stage:Stage IB, alive, 747 days
1258.7
TCGA-MU-A8JM-01A
46 years, female, white, stage:Stage IB, alive, 607 days
1255.5
TCGA-FU-A3TQ-01A
55 years, female, white, stage:Stage IIIB, alive, 795 days
1254.2
TCGA-VS-A8EG-01A
36 years, female, stage:Stage IB, alive, 1386 days
1254.2
TCGA-HM-A4S6-01A
51 years, female, white, stage:Stage IIIB, alive, 454 days
1253.9
TCGA-EA-A97N-01A
38 years, female, white, stage:Stage IB, alive, 11 days
1252.8
TCGA-VS-A9V2-01A
29 years, female, white, stage:Stage IB, alive, 555 days
1236.3
TCGA-C5-A1M7-01A
37 years, female, white, stage:Stage IB, alive, 1409 days
1230.9
TCGA-VS-A8QM-01A
47 years, female, stage:Stage IVB, dead, 951 days
1202.8
TCGA-MU-A51Y-01A
27 years, female, white, stage:Stage IIA, alive, 854 days
1201.6
TCGA-FU-A770-01A
33 years, female, white, stage:Stage IIIB, alive, 34 days
1190.6
TCGA-IR-A3LF-01A
64 years, female, white, stage:Stage IB, alive, 2949 days
1187.6
TCGA-FU-A3EO-01A
55 years, female, white, stage:Stage IIB, alive, 490 days
1176.4
TCGA-C5-A902-01A
35 years, female, black or african american, stage:Stage IB, alive, 149 days
1167.8
TCGA-C5-A7CK-01A
58 years, female, white, stage:Stage IVA, dead, 4086 days
1165.6
TCGA-C5-A7UE-01A
45 years, female, white, stage:Stage IB, alive, 4738 days
1164.6
TCGA-C5-A7CH-01A
43 years, female, white, stage:Stage IIB, alive, 4694 days
1164.1
TCGA-XS-A8TJ-01A
41 years, female, black or african american, stage:Stage IB, alive, 890 days
1162.7
TCGA-C5-A1BM-01A
78 years, female, black or african american, stage:Stage IB, dead, 2520 days
1142.0
TCGA-VS-A8EL-01A
38 years, female, black or african american, stage:Stage IIB, alive, 1992 days
1123.7
TCGA-VS-A9UM-01A
39 years, female, black or african american, stage:Stage IVB, dead, 829 days
1096.3
TCGA-EX-A8YF-01A
44 years, female, white, stage:Stage IB, alive, 473 days
1088.1
TCGA-VS-A9UZ-01A
61 years, female, white, stage:Stage IB, alive, 2044 days
1063.6
TCGA-MA-AA43-01A
48 years, female, white, stage:Stage IIIB, alive, 346 days
1061.2
TCGA-VS-A9UH-01A
53 years, female, black or african american, stage:Stage IVA, alive, 1427 days
1055.6
TCGA-MA-AA3X-01A
50 years, female, black or african american, stage:Stage IIIB, alive, 617 days
1052.8
TCGA-FU-A3YQ-01A
35 years, female, white, stage:Stage IB, alive, 861 days
1043.9
TCGA-IR-A3LI-01A
48 years, female, white, stage:Stage IVB, alive, 2493 days
1033.8
TCGA-C5-A8XJ-01A
74 years, female, white, stage:Stage IB, alive, 4467 days
1023.9
TCGA-EX-A449-01A
42 years, female, white, stage:Stage IVB, alive, 447 days
1016.4
TCGA-FU-A5XV-01A
32 years, female, white, stage:Stage IIIB, alive, 321 days
1003.1
TCGA-EA-A3QE-01A
45 years, female, white, stage:Stage IB, alive, 761 days
980.6
TCGA-C5-A7X8-01A
35 years, female, white, stage:Stage IB, alive, 83 days
908.9
TCGA-VS-A9UQ-01A
32 years, female, stage:Stage IB, alive, 1263 days
898.8
TCGA-HG-A2PA-01A
38 years, female, white, stage:Stage IB, dead, 773 days
844.8
TCGA-DG-A2KM-01A
46 years, female, stage:Stage IB, alive, 1946 days
831.4
TCGA-C5-A2LS-01A
37 years, female, white, stage:Stage IB, alive, 1345 days
789.3
TCGA-VS-A9UO-01A
43 years, female, white, stage:Stage IIB, alive, 1456 days
656.1
TCGA-VS-A954-01A
67 years, female, stage:Stage IIIB, alive, 1714 days
214.8
TCGA-C5-A1MJ-01A
61 years, female, white, stage:Stage IB, dead, 14 days
158.0
TCGA-C5-A2LV-01A
36 years, female, black or african american, stage:Stage IB, alive, 2234 days
154.7
TCGA-FU-A2QG-01A
29 years, female, white, stage:Stage IB, alive, 579 days
152.5
TCGA-ZJ-A8QQ-01A
24 years, female, white, stage:Stage IIB, alive, 2056 days
151.6
TCGA-C5-A7X3-01A
70 years, female, white, stage:Stage IIIB, dead, 284 days
138.6
TCGA-MA-AA41-01A
33 years, female, white, stage:Stage IIB, alive, 279 days
137.6
TCGA-JW-A5VJ-01A
56 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
129.3
TCGA-VS-A94X-01A
40 years, female, black or african american, stage:Stage IIB, dead, 506 days
128.4
TCGA-VS-A8EB-01A
41 years, female, white, stage:Stage IIIB, dead, 305 days
124.5
TCGA-JX-A3PZ-01A
25 years, female, white, stage:Stage IB, dead, 642 days
122.3
TCGA-MA-AA3Y-01A
48 years, female, white, stage:Stage IB, alive, 542 days
117.5
TCGA-EA-A43B-01A
43 years, female, white, stage:Stage IB, alive, 791 days
108.8
TCGA-LP-A7HU-01A
53 years, female, asian, stage:Stage II, alive, 406 days
108.8
TCGA-IR-A3LC-01A
40 years, female, white, stage:Stage IB, alive, 3935 days
108.6
TCGA-C5-A7X5-01A
72 years, female, black or african american, stage:Stage IVB, dead, 414 days
105.7
TCGA-DS-A7WI-01A
43 years, female, white, stage:Stage IIA, dead, 252 days
105.3
TCGA-VS-A8EI-01A
38 years, female, white, stage:Stage IIB, alive, 729 days
104.1
TCGA-VS-A8QA-01A
44 years, female, stage:Stage IB, alive, 1099 days
103.8
TCGA-VS-A9UL-01A
79 years, female, white, stage:Stage IIIB, dead, 442 days
99.1
TCGA-EA-A3HQ-01A
60 years, female, white, stage:Stage II, alive, 1136 days
97.5
TCGA-C5-A8YR-01A
56 years, female, white, stage:Stage IB, dead, 837 days
92.0
TCGA-VS-A8EJ-01A
60 years, female, white, stage:Stage IIB, dead, 607 days
90.5
TCGA-C5-A7CM-01A
35 years, female, white, stage:Stage IB, alive, 619 days
90.5
TCGA-VS-A9V0-01A
58 years, female, stage:Stage IB, alive, 573 days
90.0
TCGA-HM-A3JK-01A
64 years, female, white, stage:Stage IIA, alive, 632 days
89.6
TCGA-EA-A5ZE-01A
54 years, female, asian, stage:Stage IB, alive, 829 days
87.5
TCGA-C5-A3HF-01A
24 years, female, white, stage:Stage IB, dead, 543 days
83.7
TCGA-VS-A957-01A
64 years, female, white, stage:Stage IB, alive, 1688 days
81.3
TCGA-C5-A3HE-01A
44 years, female, white, stage:Stage IB, alive, 548 days
80.3
TCGA-VS-A9U5-01A
57 years, female, white, stage:Stage IIB, alive, 1535 days
78.1
TCGA-FU-A23K-01A
28 years, female, white, stage:Stage IIIB, alive, 372 days
78.0
TCGA-EA-A3HS-01A
35 years, female, white, stage:Stage IB, alive, 959 days
76.6
TCGA-FU-A3NI-01A
45 years, female, white, stage:Stage IB, dead, 638 days
76.3
TCGA-DS-A1OC-01A
47 years, female, white, stage:Stage IB, alive, 376 days
74.2
TCGA-MA-AA3W-01A
54 years, female, white, stage:Stage IB, alive, 685 days
72.6
TCGA-EA-A5O9-01A
39 years, female, white, stage:Stage IB, alive, 788 days
72.2
TCGA-JW-A5VI-01A
45 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
71.9
TCGA-LP-A4AW-01A
52 years, female, asian, stage:Stage IA, alive, 27 days
68.6
TCGA-VS-A8QC-01A
51 years, female, white, stage:Stage IVA, dead, 350 days
68.3
TCGA-EA-A556-01A
38 years, female, white, stage:Stage IB, alive, 453 days
67.6
TCGA-EA-A5ZF-01A
56 years, female, asian, stage:Stage IB, alive, 828 days
66.9
TCGA-JW-AAVH-01A
46 years, female, white, stage:Stage IB, alive, 552 days
64.5
TCGA-VS-A9UP-01A
43 years, female, stage:Stage IIA, alive, 1444 days
64.0
TCGA-JW-A852-01A
42 years, female, white, stage:Stage IIB, dead, 252 days
61.5
TCGA-Q1-A6DT-01A
55 years, female, white, stage:Stage I, dead, 275 days
60.8
TCGA-FU-A3HZ-01A
64 years, female, white, stage:Stage IIA, alive, 1103 days
59.8
TCGA-ZJ-AAXA-01A
64 years, female, white, stage:Stage IB, alive, 43 days
59.5
TCGA-JW-A5VG-01A
35 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
57.1
TCGA-ZJ-AAXU-01A
51 years, female, white, stage:Stage IIB, alive, 5 days
55.4
TCGA-FU-A3TX-01A
78 years, female, stage:Stage IB, alive, 45 days
54.5
TCGA-C5-A1ML-01A
49 years, female, white, stage:Stage IB, dead, 636 days
54.4
TCGA-JW-A5VH-01A
53 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
52.2
TCGA-MY-A5BD-01A
62 years, female, white, stage:Stage IIB, alive, 1667 days
51.9
TCGA-GH-A9DA-01A
27 years, female, white, stage:Stage IB, alive, 540 days
48.6
TCGA-IR-A3L7-01A
37 years, female, white, stage:Stage IB, alive, 4483 days
48.3
TCGA-VS-A8Q8-01A
26 years, female, white, stage:Stage IB, dead, 978 days
48.3
TCGA-Q1-A5R1-01A
32 years, female, white, stage:Stage IB, alive, 474 days
47.3
TCGA-C5-A1M5-01A
53 years, female, white, stage:Stage IB, dead, 2052 days
45.4
TCGA-UC-A7PF-01A
44 years, female, stage:Stage IB, dead, 2859 days
44.8
TCGA-UC-A7PD-01A
21 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
44.7
TCGA-EA-A3HT-01A
68 years, female, white, stage:Stage IB, alive, 954 days
44.0
TCGA-C5-A0TN-01A
21 years, female, black or african american, stage:Stage IB, dead, 348 days
43.4
TCGA-VS-A8EH-01A
56 years, female, stage:Stage IIIB, alive, 986 days
41.1
TCGA-C5-A1BJ-01A
34 years, female, white, stage:Stage IIB, alive, 4385 days
40.6
TCGA-C5-A2LZ-01A
65 years, female, white, stage:Stage IIIB, dead, 3046 days
40.0
TCGA-VS-A9UT-01A
72 years, female, asian, stage:Stage IB, alive, 482 days
38.7
TCGA-EK-A2PI-01A
44 years, female, white, stage:Stage IIIB, alive, 586 days
36.6
TCGA-DS-A0VK-01A
45 years, female, white, stage:Stage IB, dead, 1118 days
35.4
TCGA-EK-A2RA-01A
74 years, female, stage:Stage IIA, alive, 1246 days
34.5
TCGA-VS-A9V1-01A
46 years, female, white, stage:Stage IVB, dead, 157 days
34.0
TCGA-C5-A1ME-01A
40 years, female, white, stage:Stage IB, alive, 1756 days
34.0
TCGA-C5-A2LX-01A
54 years, female, white, stage:Stage IB, alive, 2526 days
33.7
TCGA-EK-A2R7-01A
45 years, female, white, stage:Stage IB, alive, 27 days
32.5
TCGA-DS-A7WH-01A
34 years, female, white, stage:Stage IB, alive, 533 days
28.7
TCGA-EA-A3HU-01A
43 years, female, white, stage:Stage II, alive, 1013 days
25.1
TCGA-EK-A2PL-01A
36 years, female, white, stage:Stage IIIB, alive, 13 days
24.2
TCGA-C5-A2LY-01A
30 years, female, white, stage:Stage IB, alive, 2383 days
23.7
TCGA-UC-A7PI-01A
44 years, female, white, stage:Stage IB, alive, 2114 days
23.5
TCGA-C5-A901-01A
44 years, female, white, stage:'--, alive, 518 days
23.0
TCGA-DS-A1O9-01A
75 years, female, white, stage:Stage IVA, dead, 266 days
23.0
TCGA-EX-A69M-01A
62 years, female, white, stage:Stage IB, dead, 253 days
23.0
TCGA-IR-A3LH-01A
49 years, female, black or african american, stage:Stage IIA, alive, 2394 days
22.3
TCGA-EA-A1QS-01A
46 years, female, white, stage:Stage IB, alive, 1203 days
20.2
TCGA-VS-A9UU-01A
42 years, female, stage:Stage IIB, alive, 442 days
20.1
TCGA-EK-A2IP-01A
28 years, female, white, stage:Stage IB, alive, 202 days
20.0
TCGA-PN-A8MA-01A
43 years, female, black or african american, stage:Stage IIB, alive, 90 days
19.1
TCGA-VS-A9V5-01A
50 years, female, white, stage:Stage IIB, dead, 494 days
18.8
TCGA-VS-A959-01A
76 years, female, stage:Stage IIB, alive, 1561 days
17.9
TCGA-C5-A1MP-01A
34 years, female, black or african american, stage:Stage IB, alive, 109 days
14.6
TCGA-C5-A7CJ-01A
42 years, female, white, stage:Stage IIA, dead, 3097 days
13.9
TCGA-DR-A0ZM-01A
61 years, female, white, stage:Stage IIIB, alive, 1791 days
12.0
TCGA-VS-A94W-01A
39 years, female, white, stage:Stage IIB, alive, 1243 days
9.9
TCGA-EK-A2RN-01A
45 years, female, white, stage:Stage IB, alive, 71 days
5.6
TCGA-C5-A7CL-01A
48 years, female, white, stage:Stage IIIB, dead, 471 days
0.8
TCGA-DG-A2KJ-01A
50 years, female, stage:Stage IIIB, alive, 2893 days
0.0
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.