Expression of TRAPPC12 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TRAPPC12 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 28.07

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

23.0

Number of samples

362

Samples

Sample	Description	TPM
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	119.8
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	93.8
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	92.3
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	91.8
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	81.4
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	78.3
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	74.9
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	70.3
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	69.2
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	67.0
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	66.8
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	58.2
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	57.6
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	57.4
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	56.1
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	50.1
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	50.1
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	49.1
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	48.6
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	45.7
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	44.6
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	44.2
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	44.0
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	43.6
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	43.5
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	42.7
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	42.6
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	42.1
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	42.0
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	41.8
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	41.4
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	41.2
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	41.2
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	41.0
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	39.9
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	39.5
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	39.1
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	38.9
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	38.9
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	37.1
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	36.6
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	36.4
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	36.4
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	36.1
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	35.9
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	35.8
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	35.4
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	34.9
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	34.2
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	34.1
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	33.8
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	33.6
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	33.5
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	32.9
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	32.6
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	32.6
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	32.1
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	31.8
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	31.6
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	31.4
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	31.0
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	30.9
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	30.5
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	30.0
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	29.9
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	29.3
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	29.1
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	28.8
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	28.8
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	28.8
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	28.6
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	28.5
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	28.5
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	28.2
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	28.2
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	28.0
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	28.0
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	27.9
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	27.9
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	27.7
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	27.7
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	27.5
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	27.2
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	27.2
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	27.1
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	26.8
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	26.7
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	26.7
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	26.5
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	26.5
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	26.4
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	26.4
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	26.4
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	26.3
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	26.1
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	26.0
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	25.7
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	25.7
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	25.7
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	25.6
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	25.5
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	25.4
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	25.3
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	24.9
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	24.6
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	24.6
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	24.5
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	24.3
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	24.2
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	24.2
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	24.1
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	24.1
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	24.0
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	24.0
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	23.8
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	23.8
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	23.8
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	23.8
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	23.8
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	23.6
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	23.6
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	23.4
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	23.4
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	23.1
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	23.1
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	22.9
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	22.9
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	22.8
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	22.8
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	22.7
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	22.6
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	22.5
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	22.4
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	22.2
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	22.1
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	22.0
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	22.0
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	22.0
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	21.9
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	21.5
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	21.5
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	21.4
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	21.3
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	21.1
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	21.1
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	21.1
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	21.1
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	21.0
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	20.8
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	20.8
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	20.8
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	20.7
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	20.7
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	20.7
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	20.6
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	20.5
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	20.5
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	20.4
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	20.4
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	20.3
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	20.3
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	20.3
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	20.3
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	20.2
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	20.1
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	20.1
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	20.0
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	19.8
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	19.6
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	19.5
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	19.5
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	19.4
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	19.3
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	19.3
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	19.3
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	19.3
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	19.2
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	19.2
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	19.2
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	19.2
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	19.1
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	19.0
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	19.0
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	18.9
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	18.9
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	18.8
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	18.8
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	18.8
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	18.8
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	18.7
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	18.6
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	18.6
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	18.5
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	18.5
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	18.5
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	18.4
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	18.4
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	18.4
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	18.4
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	18.4
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	18.3
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	18.3
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	18.3
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	18.2
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	18.2
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	18.1
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	18.0
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	18.0
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	17.9
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	17.9
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	17.8
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	17.8
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	17.8
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	17.8
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	17.8
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	17.7
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	17.7
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	17.6
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	17.6
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	17.6
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	17.5
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	17.5
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	17.5
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	17.4
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	17.4
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	17.2
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	17.2
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	17.1
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	17.1
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	17.1
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	17.0
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	17.0
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	17.0
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	16.8
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	16.8
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	16.7
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	16.7
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	16.7
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	16.6
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	16.6
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	16.6
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	16.5
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	16.4
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	16.3
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	16.3
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	16.2
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	16.1
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	16.0
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	16.0
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	16.0
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	15.9
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	15.9
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	15.9
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	15.8
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	15.7
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	15.7
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	15.6
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	15.5
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	15.4
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	15.4
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	15.4
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	15.3
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	15.3
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	15.2
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	15.2
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	15.2
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	15.2
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	15.1
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	15.0
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	14.9
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	14.8
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	14.8
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	14.7
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	14.7
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	14.6
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	14.6
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	14.5
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	14.5
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	14.4
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	14.4
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	14.3
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	14.2
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	13.8
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	13.8
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	13.7
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	13.6
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	13.6
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	13.5
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	13.4
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	13.2
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	13.1
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	13.1
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	13.1
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	12.9
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	12.9
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	12.9
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	12.8
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	12.8
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	12.7
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	12.6
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	12.6
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	12.5
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	12.4
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	12.3
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	12.3
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	12.2
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	12.2
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	12.1
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	12.1
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	12.0
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	12.0
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	11.8
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	11.7
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	11.7
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	11.7
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	11.6
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	11.6
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	11.5
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	11.4
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	11.3
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	11.2
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	11.2
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	11.1
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	11.1
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	10.9
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	10.9
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	10.8
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	10.7
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	10.7
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	10.7
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	10.6
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	10.5
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	10.4
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	10.3
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	10.2
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	10.2
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	10.1
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	10.0
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	9.9
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	9.8
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	9.7
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	9.6
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	9.5
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	9.4
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	9.3
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	9.2
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	9.0
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	8.9
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	8.8
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	8.6
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	8.4
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	8.4
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	8.4
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	8.3
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	8.3
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	7.9
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	7.9
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	7.7
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	7.6
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	7.5
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	6.4
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	6.4
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
745	Tumor	0.7
1025	Tumor	0.6
487	Tumor	0.6
533	Tumor	0.5
911	Tumor	0.5
915	Tumor	0.4
695	Tumor	0.4
211	Tumor	0.4
553	Tumor	0.4
937	Tumor	0.4
661	Tumor	0.4
471	Tumor	0.4
944	Normal	0.4
925	Tumor	0.4
1043	Tumor	0.3
923	Tumor	0.3
957	Tumor	0.3
741	Tumor	0.3
272	Normal	0.3
713	Tumor	0.3
363	Tumor	0.3
981	Tumor	0.3
954	Normal	0.3
955	Tumor	0.3
943	Tumor	0.3
953	Tumor	0.3
938	Normal	0.3
277	Tumor	0.3
635	Tumor	0.3
227	Tumor	0.3
916	Normal	0.3
966	Normal	0.3
647	Tumor	0.3
443	Tumor	0.3
861	Tumor	0.3
1031	Tumor	0.3
514	Normal	0.2
568	Normal	0.2
451	Tumor	0.2
815	Tumor	0.2
1042	Normal	0.2
472	Normal	0.2
368	Normal	0.2
918	Normal	0.2
924	Normal	0.2
362	Normal	0.2
447	Tumor	0.2
191	Tumor	0.2
573	Tumor	0.2
952	Normal	0.2
524	Normal	0.2
978	Normal	0.2
1022	Normal	0.2
914	Normal	0.2
356	Normal	0.2
484	Normal	0.2
1032	Normal	0.2
884	Normal	0.2
395	Tumor	0.2
867	Tumor	0.2
463	Tumor	0.2
958	Normal	0.2
564	Normal	0.2
526	Normal	0.2
756	Normal	0.2
327	Tumor	0.2
482	Normal	0.2
1014	Normal	0.2
868	Normal	0.2
723	Tumor	0.2
516	Normal	0.2
882	Normal	0.2
851	Tumor	0.2
968	Normal	0.2
778	Normal	0.2
545	Tumor	0.2
686	Normal	0.2
527	Tumor	0.2
817	Tumor	0.2
262	Normal	0.2
481	Tumor	0.2
864	Normal	0.2
951	Tumor	0.2
196	Normal	0.2
376	Normal	0.2
494	Normal	0.2
922	Normal	0.2
466	Normal	0.2
391	Tumor	0.2
697	Tumor	0.2
271	Tumor	0.2
558	Normal	0.2
913	Tumor	0.2
926	Normal	0.2
332	Normal	0.2
518	Normal	0.2
984	Normal	0.2
384	Normal	0.2
912	Normal	0.2
823	Tumor	0.2
1021	Tumor	0.2
572	Normal	0.2
866	Normal	0.2
956	Normal	0.2
616	Normal	0.2
491	Tumor	0.2
261	Tumor	0.2
232	Normal	0.2
721	Tumor	0.2
188	Normal	0.2
478	Normal	0.2
728	Normal	0.2
738	Normal	0.2
921	Tumor	0.2
536	Normal	0.2
525	Tumor	0.1
746	Normal	0.1
1016	Normal	0.1
468	Normal	0.1
535	Tumor	0.1
488	Normal	0.1
278	Normal	0.1
964	Normal	0.1
212	Normal	0.1
464	Normal	0.1
883	Tumor	0.1
267	Tumor	0.1
786	Normal	0.1
666	Normal	0.1
312	Normal	0.1
172	Normal	0.1
162	Normal	0.1
314	Normal	0.1
523	Tumor	0.1
513	Tumor	0.1
428	Normal	0.1
492	Normal	0.1
285	Tumor	0.1
696	Normal	0.1
366	Normal	0.1
328	Normal	0.1
258	Normal	0.1
574	Normal	0.1
431	Tumor	0.1
498	Normal	0.1
777	Tumor	0.1
663	Tumor	0.1
474	Normal	0.1
858	Normal	0.1
724	Normal	0.1
1041	Tumor	0.1
257	Tumor	0.1
852	Normal	0.1
554	Normal	0.1
534	Normal	0.1
517	Tumor	0.1
1028	Normal	0.1
874	Normal	0.1
268	Normal	0.1
1045	Tumor	0.1
878	Normal	0.1
145	Tumor	0.1
737	Tumor	0.1
412	Normal	0.1
975	Tumor	0.1
465	Tumor	0.1
141	Tumor	0.1
982	Normal	0.1
132	Normal	0.1
446	Normal	0.1
422	Normal	0.1
816	Normal	0.1
392	Normal	0.1
128	Normal	0.1
528	Normal	0.1
641	Tumor	0.1
383	Tumor	0.1
421	Tumor	0.1
662	Normal	0.1
636	Normal	0.1
138	Normal	0.1
361	Tumor	0.1
148	Normal	0.1
722	Normal	0.1
857	Tumor	0.1
714	Normal	0.1
1026	Normal	0.1
976	Normal	0.1
396	Normal	0.1
824	Normal	0.1
298	Normal	0.1
628	Normal	0.1
567	Tumor	0.1
452	Normal	0.1
493	Tumor	0.1
448	Normal	0.1
313	Tumor	0.1
818	Normal	0.1
367	Tumor	0.1
881	Tumor	0.1
716	Normal	0.1
351	Tumor	0.1
483	Tumor	0.1
424	Normal	0.1
456	Normal	0.1
195	Tumor	0.1
462	Normal	0.1
388	Normal	0.1
642	Normal	0.1
414	Normal	0.1
136	Normal	0.1
432	Normal	0.1
426	Normal	0.1
415	Tumor	0.1
618	Normal	0.1
648	Normal	0.1
455	Tumor	0.1
742	Normal	0.1
467	Tumor	0.1
113	Tumor	0.0
416	Normal	0.0
126	Normal	0.0
1046	Normal	0.0
187	Tumor	0.0
142	Normal	0.0
231	Tumor	0.0
228	Normal	0.0
477	Tumor	0.0
125	Tumor	0.0
386	Normal	0.0
546	Normal	0.0
221	Tumor	0.0
983	Tumor	0.0
353	Tumor	0.0
444	Normal	0.0
297	Tumor	0.0
664	Normal	0.0
364	Normal	0.0
146	Normal	0.0
434	Normal	0.0
672	Normal	0.0
284	Normal	0.0
214	Normal	0.0
433	Tumor	0.0
311	Tumor	0.0
411	Tumor	0.0
186	Normal	0.0
218	Normal	0.0
358	Normal	0.0
427	Tumor	0.0
344	Normal	0.0
617	Tumor	0.0
224	Normal	0.0
137	Tumor	0.0
394	Normal	0.0
1027	Tumor	0.0
727	Tumor	0.0
665	Tumor	0.0
342	Normal	0.0
114	Normal	0.0
135	Tumor	0.0
755	Tumor	0.0
814	Normal	0.0
423	Tumor	0.0
1015	Tumor	0.0
785	Tumor	0.0
563	Tumor	0.0
515	Tumor	0.0
1044	Normal	0.0
413	Tumor	0.0
286	Normal	0.0
967	Tumor	0.0
538	Normal	0.0
222	Normal	0.0
112	Tumor	0.0
461	Tumor	0.0
375	Tumor	0.0
393	Tumor	0.0
185	Tumor	0.0
873	Tumor	0.0
124	Normal	0.0
343	Tumor	0.0
425	Tumor	0.0
213	Tumor	0.0
615	Tumor	0.0
192	Normal	0.0
537	Tumor	0.0
863	Tumor	0.0
436	Normal	-0.1
698	Normal	-0.1
965	Tumor	-0.1
497	Tumor	-0.1
111	Normal	-0.1
171	Tumor	-0.1
1013	Tumor	-0.1
862	Normal	-0.1
917	Tumor	-0.1
963	Tumor	-0.1
354	Normal	-0.1
355	Tumor	-0.1
671	Tumor	-0.1
877	Tumor	-0.1
352	Normal	-0.1
365	Tumor	-0.1
123	Tumor	-0.1
445	Tumor	-0.1
147	Tumor	-0.1
715	Tumor	-0.1
223	Tumor	-0.1
283	Tumor	-0.1
557	Tumor	-0.1
744	Normal	-0.1
977	Tumor	-0.1
217	Tumor	-0.2
813	Tumor	-0.2
571	Tumor	-0.2
743	Tumor	-0.2
473	Tumor	-0.2
627	Tumor	-0.2
387	Tumor	-0.2
685	Tumor	-0.2
161	Tumor	-0.2
385	Tumor	-0.2
127	Tumor	-0.2
331	Tumor	-0.2
341	Tumor	-0.3
131	Tumor	-0.3
357	Tumor	-0.3
435	Tumor	-0.4
865	Tumor	-0.4
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA034799
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS