We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDAC3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
34.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
28.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
27.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
24.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
23.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
23.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
22.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
21.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
20.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
20.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
18.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
17.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
17.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
17.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
16.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
14.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
12.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
9.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDAC3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
66.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
63.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
61.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
59.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
56.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
55.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
53.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
53.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
53.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
52.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
52.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
52.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
51.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
51.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
51.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
50.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
50.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
49.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
48.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
47.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
47.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
47.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
46.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
46.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
45.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
45.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
45.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
44.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
44.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
44.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
44.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
44.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
44.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
44.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
44.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
44.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
43.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
43.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
43.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
43.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
42.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
42.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
42.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
42.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
42.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
42.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
42.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
42.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
42.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
42.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
42.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
42.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
41.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
41.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
41.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
41.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
41.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
41.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
41.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
41.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
40.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
40.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
40.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
40.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
40.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
40.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
40.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
39.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
39.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
39.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
39.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
39.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
39.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
39.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
39.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
39.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
39.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
39.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
38.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
38.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
38.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
38.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
38.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
38.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
38.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
38.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
37.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
37.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
37.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
37.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
37.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
37.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
37.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
37.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
37.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
37.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
37.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
37.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
37.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
37.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
37.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
36.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
36.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
36.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
36.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
36.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
36.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
36.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
36.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
35.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
35.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
35.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
35.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
35.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
35.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
35.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
35.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
35.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
35.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
35.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
35.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
35.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
35.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
35.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
35.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
34.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
34.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
34.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
34.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
34.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
34.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
34.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
34.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
34.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
33.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
33.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
33.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
33.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
33.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
33.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
33.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
33.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
33.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
33.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
33.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
33.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
33.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
32.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
32.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
32.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
32.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
32.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
32.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
32.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
32.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
32.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
32.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
32.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
32.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
32.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
32.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
31.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
31.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
31.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
31.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
31.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
31.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
31.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
31.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
30.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
30.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
30.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
30.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
30.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
30.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
30.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
30.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
29.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
29.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
29.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
29.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
29.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
29.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
29.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
29.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
29.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
29.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
29.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
29.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
28.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
28.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
28.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
28.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
28.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
28.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
28.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
28.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
28.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
28.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
27.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
27.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
27.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
27.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
27.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
26.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
26.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
26.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
24.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
24.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
24.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
24.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
24.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
24.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
23.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
23.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
23.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
23.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
22.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
21.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
21.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
20.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
20.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
19.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
19.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
19.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
18.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
18.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
18.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
17.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
17.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
16.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
16.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
16.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
16.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
14.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
13.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
12.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
10.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
7.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
6.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
4.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
4.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
2.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDAC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
54.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
50.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
50.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
44.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
43.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
43.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
41.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
40.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
40.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
40.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
40.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
39.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
39.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
39.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
38.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
38.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
37.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
37.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
36.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
36.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
36.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
35.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
34.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
34.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
34.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
34.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
32.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
32.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
32.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
32.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
30.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
30.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
29.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
29.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
29.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
28.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
28.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
27.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
26.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
26.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
25.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
25.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
24.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
24.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
19.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
17.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
16.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDAC3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
49.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
49.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
47.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
46.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
44.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
44.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
44.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
43.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
43.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
41.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
41.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
40.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
38.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
37.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
35.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
34.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
34.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
34.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
34.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
33.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
33.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
32.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
32.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
31.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
31.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
30.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
30.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
30.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
30.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
30.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
29.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
29.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
29.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
29.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
29.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
28.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
28.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
28.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
28.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
28.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
28.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
27.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
27.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
26.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
26.6
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
26.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
26.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
26.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
25.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
25.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
25.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
25.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
24.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
24.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
24.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
24.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
23.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
22.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
22.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
22.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
21.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
21.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
21.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
20.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
20.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
20.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
19.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
19.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
18.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
18.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
18.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
18.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
17.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
16.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
16.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
16.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
16.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
16.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
15.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
14.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
14.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
13.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
12.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
12.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
10.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
10.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
9.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
9.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
8.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
7.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
7.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
5.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
4.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
4.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
3.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
2.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
2.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065930003
Tumor
0.8
CPT0019990003
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0077110003
Tumor
0.5
CPT0081990003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0088550004
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0019130003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0012550003
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0014370004
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0006950001
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0010160003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0078510003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0084590001
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0012280003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0001230001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0001180009
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0014350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0079510001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0007470001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0025580004
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0020130001
Normal
-0.3
CPT0066430001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0025060001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0023690003
Tumor
-0.4
CPT0075560003
Tumor
-0.5
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
