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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
107.5
nTPM
GTEx:
107.5
nTPM
FANTOM5:
502.7
Scaled Tags Per Million
Pig:
220.0
nTPM
Mouse:
709.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
107.5
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 107.5
Samples: 105
Max nTPM: 258.7
Min nTPM: 11.7
Std nTPM: 50.7
Median nTPM:
218_1
71 years, female
258.7
352_1
62 years, male
230.4
353_1
82 years, female
214.1
319_1
81 years, male
209.3
163_1
78 years, male
201.8
350_1
84 years, female
196.8
172_1
72 years, female
189.3
354_1
81 years, female
182.9
356_1
87 years, female
182.4
351_1
91 years, male
179.5
243_1
75 years, male
179.3
237_1
82 years, male
178.3
386_1
76 years, male
171.3
377_1
82 years, female
162.7
321_1
62 years, female
159.0
173_1
67 years, male
158.9
349_1
83 years, male
158.9
293_1
68 years, female
152.8
177_1
74 years, male
151.4
318_1
68 years, male
150.7
320_1
89 years, female
150.1
506_1
65 years, male
149.9
376_1
75 years, female
147.7
452_1
88 years, female
146.5
355_1
70 years, female
142.3
6_1
73 years, female
140.0
379_1
60 years, male
139.8
295_1
61 years, female
139.7
292_1
71 years, male
134.9
375_1
74 years, female
133.9
251_1
78 years, male
132.2
316_1
62 years, male
131.8
322_1
76 years, male
131.6
425_1
59 years, female
131.5
335_1
73 years, female
131.3
317_1
60 years, male
129.2
406_1
79 years, male
128.6
394_1
75 years, female
127.6
347_1
72 years, male
125.1
384_1
83 years, male
123.4
447_1
81 years, male
122.6
480_1
63 years, male
121.6
264_1
73 years, female
120.9
503_1
68 years, male
117.0
286_1
68 years, female
112.8
389_1
86 years, female
112.8
189_1
76 years, male
110.6
348_1
84 years, male
108.5
404_1
82 years, female
108.4
4_1
88 years, female
106.8
517_1
88 years, male
103.8
291_1
76 years, male
103.4
229_1
69 years, female
102.9
405_1
91 years, male
100.0
526_1
61 years, male
98.9
17_1
71 years, male
98.0
99_1
64 years, male
98.0
137_1
83 years, male
96.8
35_1
74 years, female
96.1
145_1
84 years, male
95.3
307_1
66 years, female
93.6
246_1
77 years, male
93.0
396_1
62 years, male
90.9
265_1
87 years, male
90.5
115_1
83 years, male
89.8
2_1
77 years, female
89.2
254_1
77 years, female
88.5
468_1
89 years, male
86.2
266_1
85 years, male
85.1
18_1
88 years, male
84.9
120_1
70 years, female
80.7
41_1
94 years, female
80.2
518_1
75 years, female
78.2
42_1
85 years, male
77.6
217_1
76 years, male
77.6
311_1
78 years, male
76.9
9_1
66 years, female
75.3
288_1
66 years, female
75.3
314_1
67 years, male
74.7
324_1
76 years, male
73.9
153_1
70 years, female
73.6
126_1
63 years, male
73.4
142_1
61 years, female
64.1
109_1
81 years, female
64.0
313_1
79 years, female
61.8
499_1
55 years, female
61.2
117_1
61 years, male
60.6
139_1
64 years, female
56.9
315_1
62 years, female
50.7
119_1
70 years, female
50.5
81_1
67 years, male
47.0
43_1
64 years, female
46.6
32_1
67 years, male
45.6
162_1
79 years, female
41.9
89_1
63 years, male
39.9
495_1
57 years, female
39.8
415_1
77 years, female
37.4
501_1
88 years, male
34.7
308_1
70 years, female
32.0
466_1
57 years, female
28.5
149_1
88 years, male
26.2
414_1
84 years, female
21.6
413_1
59 years, female
17.4
490_1
67 years, female
14.8
491_1
89 years, female
11.7
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
