HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.2 nTPM
HPA Brain:80.0 nTPM
GTEx:18.2 nTPM
FANTOM5:109.6 Scaled Tags Per Million
Pig:103.6 nTPM
Mouse:40.2 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 80.0
Sample id Sample description nTPM
Hippocampus
nTPM: 72.2
2148 Female, age 91, left hemisphere 121.7
2621 Female, age 67, right hemisphere 96.9
1898 Male, age 80, left hemisphere 83.2
1855 Male, age 76, left hemisphere 66.1
1911 Female, age 85, right hemisphere 39.9
2529 Female, age 94, left hemisphere 25.6
Dentate gyrus
nTPM: 72.4
1927 Female, age 91, both hemispheres 107.5
2530 Female, age 94, left hemisphere 78.9
2010 Male, age 76, both hemispheres 78.5
2531 Female, age 67, both hemispheres 75.3
2528 Male, age 74, both hemispheres 49.3
2246 Female, age 85, both hemispheres 44.8
Entorhinal gyrus
nTPM: 46.4
2764 Male, age 80, right hemisphere 60.7
1938 Female, age 85, left hemisphere 48.5
2613 Female, age 94, left hemisphere 47.9
2686 Male, age 75, right hemisphere 45.6
1787 Male, age 76, left hemisphere 42.2
2117 Female, age 91, right hemisphere 33.8
Hippocampus, CA1
nTPM: 80.0
2749 Male, age 80, left hemisphere 185.8
1873 Female, age 85, both hemispheres 75.4
2527 Male, age 74, both hemispheres 57.5
2045 Male, age 76, both hemispheres 53.5
2082 Female, age 91, right hemisphere 27.9
Hippocampus, CA2
nTPM: 58.3
1963 Male, age 80, left hemisphere 128.7
1892 Male, age 76, both hemispheres 85.3
2249 Male, age 74, both hemispheres 40.3
2437 Female, age 94, left hemisphere 40.2
2113 Female, age 91, right hemisphere 32.3
1940 Female, age 85, left hemisphere 22.8
Hippocampus, CA3
nTPM: 65.2
2861 Female, age 67, both hemispheres 117.6
2137 Male, age 80, left hemisphere 106.4
2620 Female, age 94, left hemisphere 52.0
1867 Male, age 76, both hemispheres 46.5
2436 Male, age 74, both hemispheres 36.6
1891 Female, age 85, both hemispheres 31.8
Parahippocampal cortex
nTPM: 44.7
2245 Female, age 91, both hemispheres 76.9
2532 Female, age 72, left hemisphere 53.5
2622 Female, age 67, right hemisphere 52.4
1850 Male, age 80, both hemispheres 46.9
1990 Female, age 91, right hemisphere 41.8
1933 Female, age 85, both hemispheres 39.9
2693 Female, age 94, both hemispheres 38.8
2250 Female, age 67, right hemisphere 38.2
2692 Male, age 74, both hemispheres 34.1
2018 Male, age 76, both hemispheres 24.3
Perirhinal gyrus
nTPM: 44.9
1847 Female, age 91, left hemisphere 54.6
1794 Male, age 80, right hemisphere 51.9
2521 Female, age 94, right hemisphere 46.7
2848 Male, age 76, right hemisphere 37.0
1841 Female, age 85, right hemisphere 34.1
Subiculum
nTPM: 40.5
1901 Male, age 80, both hemispheres 61.6
2042 Male, age 76, both hemispheres 44.9
2729 Female, age 91, right hemisphere 40.2
1977 Female, age 85, both hemispheres 35.4
2438 Female, age 94, left hemisphere 34.4
2619 Male, age 74, both hemispheres 26.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.2
Samples: 197

Max nTPM: 90.8
Min nTPM: 0.0
Std nTPM: 16.7
Median nTPM: 13.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 90.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 88.5
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 72.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 58.4
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 56.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 56.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 53.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 51.9
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 50.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 109.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.6
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 73.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 103.6
Pig sample Sample description nTPM
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 49.8
Min nTPM: 37.5
Sample A Female 49.8
Sample B Female 39.3
Sample C Male 37.5
Sample D Male 38.4
Dorsal hippocampus
nTPM: 103.6
Samples: 4

Max nTPM: 119.8
Min nTPM: 58.4
Sample A Female 118.1
Sample B Female 118.0
Sample C Male 58.4
Sample D Male 119.8
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 44.2
Min nTPM: 39.3
Sample A Female 43.3
Sample B Female 39.4
Sample C Male 44.2
Sample D Male 39.3
Ventral hippocampus
nTPM: 67.8
Samples: 4

Max nTPM: 115.2
Min nTPM: 45.1
Sample A Female 57.2
Sample B Female 45.1
Sample C Male 53.5
Sample D Male 115.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 21.7
Min nTPM: 18.6
Sample A Male 21.7
Sample B Male 20.4
Sample C Female 19.4
Sample D Female 18.6
Hippocampal formation
nTPM: 40.2
Samples: 4

Max nTPM: 49.8
Min nTPM: 30.2
Sample A Male 30.2
Sample B Male 47.1
Sample C Female 49.8
Sample D Female 33.7

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