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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF581 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
75.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
45.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
42.6
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
41.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
39.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
39.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
38.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
37.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
36.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
36.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
35.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
34.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
34.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
34.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
33.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
33.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
33.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
31.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
30.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
30.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
29.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
29.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
27.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
27.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
27.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
26.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
26.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
25.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
24.9
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
23.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
23.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
23.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
22.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
22.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
22.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
22.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
21.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
21.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
21.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
20.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
20.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
19.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
19.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
19.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
19.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
19.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
19.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
18.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
18.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
18.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
18.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
17.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
17.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
16.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
16.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
16.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
16.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
16.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
16.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
16.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
15.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
15.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
15.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
15.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
15.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
15.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
14.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
14.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
14.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
14.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
14.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
13.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
13.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
13.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
13.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
13.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
13.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
13.2
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
13.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
12.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
12.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
12.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
12.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
12.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
12.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
11.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
11.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
11.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
11.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
11.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
11.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
11.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
11.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
11.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
11.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
10.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
10.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
10.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
10.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
10.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
10.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
10.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
10.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
10.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
10.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
10.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
10.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
9.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
9.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
9.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
9.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
9.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
9.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
9.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
9.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
8.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
8.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
8.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
8.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
8.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
8.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
7.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
7.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
7.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
7.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
7.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
6.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
6.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
6.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
6.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
6.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
6.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
6.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
5.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
4.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
4.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
4.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
4.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
3.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.1
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF581 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.2
Number of samples
231
Samples
Sample
Description
TPM
DO45285
0 years, male, NA, stage:3, alive, 480 days
40.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
39.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
36.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
30.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
30.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
28.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
28.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
26.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
25.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
23.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
22.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
20.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
20.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
19.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
19.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
19.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
18.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
17.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
15.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
15.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
15.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
14.4
DO48757
0 years, female, NA, stage:3, alive, 480 days
14.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
13.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
13.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
13.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
13.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
12.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
12.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
11.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
11.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
10.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
10.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
10.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
10.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
10.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
9.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
9.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
9.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
9.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
9.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
9.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
8.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.4
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
8.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
8.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
8.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
8.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
8.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
7.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
7.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
7.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
7.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
7.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
7.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
6.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
6.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.5
DO45155
0 years, male, NA, stage:2, alive, 2160 days
6.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
6.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
6.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
6.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.2
DO45139
0 years, male, NA, stage:3, alive, 1320 days
6.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
6.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
6.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
6.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
5.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
5.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
5.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
5.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
5.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
4.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
4.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
4.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
4.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
4.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
4.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
4.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
4.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
3.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.9
DO45159
0 years, male, NA, stage:3, alive, 1470 days
3.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
3.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
2.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
1.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.9
428
Normal
0.8
958
Normal
0.7
414
Normal
0.7
413
Tumor
0.6
424
Normal
0.6
426
Normal
0.6
534
Normal
0.5
423
Tumor
0.5
422
Normal
0.5
427
Tumor
0.4
976
Normal
0.3
421
Tumor
0.3
744
Normal
0.3
964
Normal
0.3
743
Tumor
0.3
814
Normal
0.2
742
Normal
0.2
528
Normal
0.2
741
Tumor
0.1
546
Normal
0.1
538
Normal
0.1
786
Normal
0.1
965
Tumor
0.1
966
Normal
0.1
554
Normal
0.1
738
Normal
0.1
728
Normal
0.0
813
Tumor
0.0
756
Normal
0.0
553
Tumor
0.0
723
Tumor
0.0
968
Normal
0.0
967
Tumor
0.0
545
Tumor
-0.1
1016
Normal
-0.1
727
Tumor
-0.1
1014
Normal
-0.2
963
Tumor
-0.2
975
Tumor
-0.2
737
Tumor
-0.2
982
Normal
-0.2
978
Normal
-0.3
724
Normal
-0.3
984
Normal
-0.3
983
Tumor
-0.4
957
Tumor
-0.4
777
Tumor
-0.4
533
Tumor
-0.4
527
Tumor
-0.4
778
Normal
-0.4
746
Normal
-0.5
745
Tumor
-0.5
537
Tumor
-0.5
1015
Tumor
-0.5
785
Tumor
-0.7
755
Tumor
-0.7
977
Tumor
-0.7
981
Tumor
-0.9
1013
Tumor
-1.1
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
278
Normal
N/A
951
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
615
Tumor
N/A
857
Tumor
N/A
616
Normal
N/A
858
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
861
Tumor
N/A
862
Normal
N/A
863
Tumor
N/A
1046
Normal
N/A
864
Normal
N/A
1045
Tumor
N/A
865
Tumor
N/A
866
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
535
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
666
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
312
Normal
N/A
433
Tumor
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
