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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:85.1 nTPM
HPA Brain:243.3 nTPM
GTEx:85.1 nTPM
Pig:64.8 nTPM
Mouse:175.6 nTPM
Allen mouse:14.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

243.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 145.7
1961 Female, age 42, unknown 155.7
2226 Male, age 75, left hemisphere 135.8
Dorsomedial nucleus
nTPM: 198.1
1989 Male, age 62, unknown 226.0
2017 Female, age 42, unknown 225.7
2041 Female, age 72, unknown 142.5
Lateral hypothalamic area
nTPM: 209.7
2228 Male, age 66, unknown 237.2
2271 Male, age 75, both hemispheres 234.7
1791 Male, age 80, right hemisphere 196.2
2412 Male, age 62, unknown 170.8
Mammillary body
nTPM: 243.3
1945 Male, age 80, right hemisphere 283.6
1834 Female, age 42, unknown 248.5
1948 Female, age 72, unknown 247.3
1923 Female, age 72, unknown 221.1
2413 Male, age 66, unknown 216.1
Paraventricular nucleus
nTPM: 237.6
2700 Male, age 62, unknown 237.6
Preoptic area
nTPM: 222.0
2414 Female, age 72, unknown 273.1
1861 Female, age 42, unknown 217.3
1907 Male, age 80, right hemisphere 175.5
Supraoptic nucleus
nTPM: 153.5
2835 Female, age 72, unknown 170.3
2043 Male, age 62, unknown 160.7
1894 Female, age 72, unknown 129.5
Ventromedial nucleus
nTPM: 167.8
1982 Female, age 72, unknown 186.6
1822 Female, age 42, unknown 148.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 85.1
Samples: 257

Max nTPM: 226.2
Min nTPM: 31.6
Std nTPM: 28.2
Median nTPM: 81.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 226.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 171.4
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 169.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 166.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 155.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 147.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 146.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 143.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 142.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 141.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 141.4
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 139.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 136.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 136.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 135.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 134.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 133.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 133.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 133.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 133.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 131.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 130.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 130.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 128.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 127.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 125.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 124.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 123.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 123.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 123.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 122.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 118.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 118.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 113.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 113.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 112.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 112.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 112.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 110.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 108.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 108.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 108.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 107.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 107.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 106.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 106.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 104.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 104.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 104.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 104.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 103.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 103.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 103.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 103.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 102.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 102.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 102.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 101.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 101.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 101.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 101.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 100.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 100.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 99.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 99.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 98.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 98.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 98.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 97.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 97.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 97.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 96.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 96.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 95.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 95.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 94.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 94.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 94.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 93.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 93.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 93.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 93.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 93.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 92.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 92.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 92.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 92.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 92.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 92.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 92.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 92.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 91.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 91.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 91.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 91.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 91.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 90.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 90.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 89.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 89.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 89.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 89.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 88.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 87.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 87.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 87.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 87.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 87.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 86.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 86.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 86.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 86.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 86.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 85.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 85.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 83.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 83.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 83.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 83.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 83.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 82.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 82.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 82.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 82.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 82.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 82.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 82.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 82.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 81.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 81.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 81.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 81.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 81.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 80.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 80.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 80.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 80.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 80.0
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 80.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 79.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 79.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 78.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 78.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 78.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 78.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 78.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 78.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 78.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 77.7
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 77.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 77.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 77.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 76.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 76.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 76.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 76.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 75.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 75.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 75.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 74.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 74.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 73.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 73.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 73.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 72.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 72.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 72.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 71.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 71.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 71.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 71.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 71.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 71.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 71.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 71.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 70.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 70.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 70.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 69.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 69.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 68.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 68.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 68.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 68.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 68.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 68.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 67.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 67.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 67.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 66.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 66.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 66.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 65.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 65.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 64.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 64.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 64.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 63.9
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 63.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 63.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 63.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 63.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 62.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 61.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 60.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 60.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 60.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 59.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 59.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 59.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 59.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 59.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 59.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 58.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 58.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 58.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 58.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 57.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 57.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 56.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 55.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 55.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 55.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 55.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 54.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 53.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 53.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 52.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 52.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 52.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 51.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 51.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 50.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 50.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 50.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 50.7
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 50.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 50.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 50.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 50.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 49.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 46.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 45.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 44.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 44.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 43.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 40.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 39.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 38.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 37.9
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 35.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 35.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 35.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 31.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 64.8
Samples: 4

Max nTPM: 85.8
Min nTPM: 39.3
Sample A Female 85.8
Sample B Female 67.3
Sample C Male 66.9
Sample D Male 39.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 175.6
Samples: 4

Max nTPM: 193.4
Min nTPM: 164.0
Sample A Male 164.0
Sample B Male 167.8
Sample C Female 193.4
Sample D Female 177.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.0
74724775 Antisense, RP_060220_04_B09, Mouse strain C57BL/6J (56 days, male) 14.6
69407355 Antisense, RP_050414_01_D12, Mouse strain C57BL/6J (56 days, male) 13.5

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