HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:76.0 nTPM
HPA Brain:64.6 nTPM
GTEx:76.0 nTPM
FANTOM5:47.5 Scaled Tags Per Million
Pig:78.6 nTPM
Mouse:0.7 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.9
1898 Male, age 80, left hemisphere 74.0
2529 Female, age 94, left hemisphere 64.3
1855 Male, age 76, left hemisphere 57.2
2621 Female, age 67, right hemisphere 57.2
2148 Female, age 91, left hemisphere 56.7
1911 Female, age 85, right hemisphere 55.9
Dentate gyrus
nTPM: 61.2
2530 Female, age 94, left hemisphere 69.4
2010 Male, age 76, both hemispheres 65.0
2528 Male, age 74, both hemispheres 60.3
1927 Female, age 91, both hemispheres 59.8
2531 Female, age 67, both hemispheres 59.6
2246 Female, age 85, both hemispheres 53.3
Entorhinal gyrus
nTPM: 58.4
2764 Male, age 80, right hemisphere 74.8
2117 Female, age 91, right hemisphere 62.5
1938 Female, age 85, left hemisphere 59.6
1787 Male, age 76, left hemisphere 57.5
2613 Female, age 94, left hemisphere 56.3
2686 Male, age 75, right hemisphere 39.7
Hippocampus, CA1
nTPM: 64.6
2749 Male, age 80, left hemisphere 91.7
2527 Male, age 74, both hemispheres 66.8
2082 Female, age 91, right hemisphere 58.5
1873 Female, age 85, both hemispheres 54.3
2045 Male, age 76, both hemispheres 51.8
Hippocampus, CA2
nTPM: 61.1
2249 Male, age 74, both hemispheres 73.4
1963 Male, age 80, left hemisphere 71.7
2113 Female, age 91, right hemisphere 59.2
2437 Female, age 94, left hemisphere 56.5
1892 Male, age 76, both hemispheres 53.7
1940 Female, age 85, left hemisphere 52.1
Hippocampus, CA3
nTPM: 59.8
2436 Male, age 74, both hemispheres 84.7
2137 Male, age 80, left hemisphere 66.8
2861 Female, age 67, both hemispheres 55.4
2620 Female, age 94, left hemisphere 55.2
1867 Male, age 76, both hemispheres 53.4
1891 Female, age 85, both hemispheres 43.2
Parahippocampal cortex
nTPM: 53.7
2245 Female, age 91, both hemispheres 71.1
2250 Female, age 67, right hemisphere 63.0
1990 Female, age 91, right hemisphere 60.4
2532 Female, age 72, left hemisphere 60.0
1933 Female, age 85, both hemispheres 59.7
2018 Male, age 76, both hemispheres 50.5
1850 Male, age 80, both hemispheres 49.3
2622 Female, age 67, right hemisphere 43.1
2692 Male, age 74, both hemispheres 41.3
2693 Female, age 94, both hemispheres 38.8
Perirhinal gyrus
nTPM: 57.8
1794 Male, age 80, right hemisphere 70.1
1847 Female, age 91, left hemisphere 69.9
1841 Female, age 85, right hemisphere 53.4
2521 Female, age 94, right hemisphere 53.0
2848 Male, age 76, right hemisphere 42.8
Subiculum
nTPM: 52.4
1977 Female, age 85, both hemispheres 61.7
1901 Male, age 80, both hemispheres 57.6
2619 Male, age 74, both hemispheres 54.7
2729 Female, age 91, right hemisphere 54.1
2042 Male, age 76, both hemispheres 44.0
2438 Female, age 94, left hemisphere 42.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 76.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.0
Samples: 197

Max nTPM: 172.3
Min nTPM: 14.0
Std nTPM: 25.9
Median nTPM: 72.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 172.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 168.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 153.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 150.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 146.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 144.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 141.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 139.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 126.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 122.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 118.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 47.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.5
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 45.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 78.6
Pig sample Sample description nTPM
Subiculum
nTPM: 58.3
Samples: 4

Max nTPM: 78.2
Min nTPM: 44.6
Sample A Female 78.2
Sample B Female 50.2
Sample C Male 60.3
Sample D Male 44.6
Dorsal hippocampus
nTPM: 73.0
Samples: 4

Max nTPM: 95.3
Min nTPM: 62.5
Sample A Female 95.3
Sample B Female 69.1
Sample C Male 64.9
Sample D Male 62.5
Entorhinal cortex
nTPM: 54.4
Samples: 4

Max nTPM: 59.2
Min nTPM: 50.5
Sample A Female 59.2
Sample B Female 54.1
Sample C Male 53.6
Sample D Male 50.5
Ventral hippocampus
nTPM: 78.6
Samples: 4

Max nTPM: 95.8
Min nTPM: 50.8
Sample A Female 86.3
Sample B Female 50.8
Sample C Male 95.8
Sample D Male 81.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.4
Sample A Male 1.3
Sample B Male 0.6
Sample C Female 0.6
Sample D Female 0.4
Hippocampal formation
nTPM: 0.7
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.5
Sample A Male 0.5
Sample B Male 1.1
Sample C Female 0.5
Sample D Female 0.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
2549 Antisense, RP_040507_01_F01, Mouse strain C57BL/6J (56 days, male) 2.5
2550 Antisense, RP_040507_01_F01, Mouse strain C57BL/6J (56 days, male) 0.5

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