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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM126B is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
38.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
32.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
29.7
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
22.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
22.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
22.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
22.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
21.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
21.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
19.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
19.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
19.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
18.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
17.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
17.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
16.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
16.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
15.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
15.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
15.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
15.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
14.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
14.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
14.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
14.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.4
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
14.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
14.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
13.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
13.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
13.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
13.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
13.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
13.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
13.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
13.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
13.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
12.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
12.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
12.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
11.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
11.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.5
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
11.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
11.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
11.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
11.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
11.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
10.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
10.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
10.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
10.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
10.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
10.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
10.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
10.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
10.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
9.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
9.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
9.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
9.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
9.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
9.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
8.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
8.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
8.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
8.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
8.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
8.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
8.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
8.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
8.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
8.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
7.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
7.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
7.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.7
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
7.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
7.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
7.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
7.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
7.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
7.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
7.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
7.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
7.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
7.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
6.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
6.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
6.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
6.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
6.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
6.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
6.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
6.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
6.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
5.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
5.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
5.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
5.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
5.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
4.9
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
4.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
4.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
4.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
4.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
4.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
3.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
3.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
2.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
1.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
1.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM126B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.2
Number of samples
231
Samples
Sample
Description
TPM
DO45119
0 years, male, NA, stage:3, dead, 510 days
70.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
55.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
55.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
54.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
52.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
51.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
49.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
47.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
47.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
47.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
45.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
44.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
43.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
41.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
41.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
41.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
40.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
40.7
DO23513
0 years, male, NA, stage:3, alive, 1200 days
40.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
40.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
39.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
38.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
38.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
38.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
38.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
37.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
37.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
37.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
36.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
36.8
DO45241
0 years, male, NA, stage:1, alive, 1080 days
36.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
36.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
36.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
36.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
35.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
35.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
35.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
35.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
34.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
34.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
34.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
34.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
34.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
34.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
34.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
33.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
33.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
33.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
33.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
33.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
32.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
32.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
32.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
32.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
32.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
32.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
31.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
31.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
31.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
31.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
31.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
31.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
30.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
30.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
30.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
30.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
30.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
29.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
29.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
29.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
29.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
29.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
29.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
29.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
29.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
29.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
28.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
28.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
28.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
28.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
28.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
28.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
28.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
27.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
27.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
27.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
27.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
27.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
27.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
27.0
DO45207
0 years, male, NA, stage:1, alive, 1050 days
26.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
26.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
26.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
26.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
26.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
26.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
26.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
26.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
25.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
25.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
25.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
25.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
25.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
25.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
25.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
25.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
24.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
24.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
24.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
24.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
24.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
24.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
24.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
24.0
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
23.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
23.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
23.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
23.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
23.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
23.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
23.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
22.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
22.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
22.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
22.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
22.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
22.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
22.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
22.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
22.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
22.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
21.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
21.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
21.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
21.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
21.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
21.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
21.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
21.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
21.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
21.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
21.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
21.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
21.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
21.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
20.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
20.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
20.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
20.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
20.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
20.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
20.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
20.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
20.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
20.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
20.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
20.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
19.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
19.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
19.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
19.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
19.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
19.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
18.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
18.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
18.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
18.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
18.6
DO50840
0 years, male, NA, stage:2, alive, 330 days
18.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
18.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
18.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
18.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
17.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
17.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
17.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
17.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
17.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
17.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
16.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
16.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
16.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
15.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
15.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
15.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
14.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
14.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.5
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
12.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
1041
Tumor
1.7
865
Tumor
1.5
557
Tumor
1.5
915
Tumor
1.0
1043
Tumor
0.9
171
Tumor
0.8
127
Tumor
0.8
128
Normal
0.8
913
Tumor
0.7
641
Tumor
0.7
221
Tumor
0.7
277
Tumor
0.7
393
Tumor
0.7
627
Tumor
0.7
271
Tumor
0.6
615
Tumor
0.6
227
Tumor
0.6
665
Tumor
0.6
448
Normal
0.6
977
Tumor
0.6
1046
Normal
0.6
1031
Tumor
0.6
423
Tumor
0.6
357
Tumor
0.5
461
Tumor
0.5
445
Tumor
0.5
517
Tumor
0.5
867
Tumor
0.5
427
Tumor
0.5
715
Tumor
0.5
572
Normal
0.5
257
Tumor
0.5
721
Tumor
0.5
1014
Normal
0.5
1025
Tumor
0.4
267
Tumor
0.4
864
Normal
0.4
912
Normal
0.4
428
Normal
0.4
446
Normal
0.4
435
Tumor
0.4
487
Tumor
0.4
426
Normal
0.4
368
Normal
0.4
741
Tumor
0.4
698
Normal
0.4
141
Tumor
0.4
148
Normal
0.4
132
Normal
0.4
648
Normal
0.4
862
Normal
0.4
414
Normal
0.4
422
Normal
0.4
777
Tumor
0.4
473
Tumor
0.4
813
Tumor
0.3
451
Tumor
0.3
564
Normal
0.3
722
Normal
0.3
818
Normal
0.3
114
Normal
0.3
232
Normal
0.3
878
Normal
0.3
136
Normal
0.3
388
Normal
0.3
314
Normal
0.3
218
Normal
0.3
217
Tumor
0.3
491
Tumor
0.3
358
Normal
0.3
914
Normal
0.3
396
Normal
0.3
436
Normal
0.3
465
Tumor
0.3
424
Normal
0.3
857
Tumor
0.3
278
Normal
0.3
723
Tumor
0.3
162
Normal
0.3
111
Normal
0.3
196
Normal
0.3
376
Normal
0.3
982
Normal
0.3
361
Tumor
0.3
528
Normal
0.3
1021
Tumor
0.3
1027
Tumor
0.3
881
Tumor
0.3
135
Tumor
0.3
1026
Normal
0.3
568
Normal
0.3
433
Tumor
0.3
636
Normal
0.3
786
Normal
0.2
342
Normal
0.2
944
Normal
0.2
513
Tumor
0.2
392
Normal
0.2
138
Normal
0.2
628
Normal
0.2
195
Tumor
0.2
124
Normal
0.2
861
Tumor
0.2
354
Normal
0.2
664
Normal
0.2
452
Normal
0.2
147
Tumor
0.2
785
Tumor
0.2
432
Normal
0.2
756
Normal
0.2
1044
Normal
0.2
525
Tumor
0.2
456
Normal
0.2
466
Normal
0.2
462
Normal
0.2
352
Normal
0.2
394
Normal
0.2
981
Tumor
0.2
858
Normal
0.2
286
Normal
0.2
285
Tumor
0.2
573
Tumor
0.2
186
Normal
0.2
113
Tumor
0.2
1016
Normal
0.2
662
Normal
0.2
222
Normal
0.2
366
Normal
0.2
742
Normal
0.2
386
Normal
0.2
332
Normal
0.2
978
Normal
0.2
1022
Normal
0.2
666
Normal
0.2
824
Normal
0.2
546
Normal
0.2
344
Normal
0.2
214
Normal
0.2
873
Tumor
0.2
258
Normal
0.1
553
Tumor
0.1
635
Tumor
0.1
356
Normal
0.1
464
Normal
0.1
1045
Tumor
0.1
481
Tumor
0.1
387
Tumor
0.1
444
Normal
0.1
714
Normal
0.1
468
Normal
0.1
823
Tumor
0.1
816
Normal
0.1
443
Tumor
0.1
261
Tumor
0.1
365
Tumor
0.1
126
Normal
0.1
817
Tumor
0.1
172
Normal
0.1
467
Tumor
0.1
272
Normal
0.1
463
Tumor
0.1
391
Tumor
0.1
331
Tumor
0.1
1013
Tumor
0.1
384
Normal
0.1
554
Normal
0.1
191
Tumor
0.1
877
Tumor
0.1
125
Tumor
0.1
737
Tumor
0.1
863
Tumor
0.1
696
Normal
0.1
851
Tumor
0.1
921
Tumor
0.1
778
Normal
0.1
883
Tumor
0.1
882
Normal
0.1
728
Normal
0.1
262
Normal
0.1
362
Normal
0.1
353
Tumor
0.1
642
Normal
0.1
884
Normal
0.1
534
Normal
0.1
526
Normal
0.1
298
Normal
0.0
814
Normal
0.0
416
Normal
0.0
984
Normal
0.0
618
Normal
0.0
671
Tumor
0.0
421
Tumor
0.0
616
Normal
0.0
967
Tumor
0.0
375
Tumor
0.0
312
Normal
0.0
716
Normal
0.0
755
Tumor
0.0
341
Tumor
0.0
852
Normal
0.0
192
Normal
0.0
142
Normal
0.0
146
Normal
0.0
868
Normal
0.0
647
Tumor
0.0
482
Normal
0.0
488
Normal
0.0
738
Normal
0.0
364
Normal
0.0
187
Tumor
0.0
866
Normal
0.0
343
Tumor
0.0
395
Tumor
0.0
284
Normal
0.0
328
Normal
0.0
815
Tumor
0.0
327
Tumor
0.0
1032
Normal
0.0
533
Tumor
0.0
558
Normal
0.0
131
Tumor
-0.1
1015
Tumor
-0.1
483
Tumor
-0.1
213
Tumor
-0.1
713
Tumor
-0.1
685
Tumor
-0.1
574
Normal
-0.1
231
Tumor
-0.1
567
Tumor
-0.1
663
Tumor
-0.1
431
Tumor
-0.1
137
Tumor
-0.1
743
Tumor
-0.1
672
Normal
-0.1
686
Normal
-0.1
268
Normal
-0.1
188
Normal
-0.1
874
Normal
-0.1
514
Normal
-0.1
311
Tumor
-0.1
161
Tumor
-0.1
185
Tumor
-0.1
964
Normal
-0.1
1028
Normal
-0.1
727
Tumor
-0.1
926
Normal
-0.1
518
Normal
-0.1
434
Normal
-0.1
413
Tumor
-0.2
746
Normal
-0.2
697
Tumor
-0.2
412
Normal
-0.2
228
Normal
-0.2
966
Normal
-0.2
385
Tumor
-0.2
411
Tumor
-0.2
484
Normal
-0.2
383
Tumor
-0.2
922
Normal
-0.2
223
Tumor
-0.2
515
Tumor
-0.2
224
Normal
-0.2
297
Tumor
-0.2
953
Tumor
-0.2
455
Tumor
-0.2
938
Normal
-0.2
535
Tumor
-0.2
536
Normal
-0.2
472
Normal
-0.2
523
Tumor
-0.2
145
Tumor
-0.2
447
Tumor
-0.2
527
Tumor
-0.2
744
Normal
-0.2
911
Tumor
-0.3
425
Tumor
-0.3
493
Tumor
-0.3
918
Normal
-0.3
112
Tumor
-0.3
474
Normal
-0.3
212
Normal
-0.3
123
Tumor
-0.3
494
Normal
-0.3
745
Tumor
-0.3
955
Tumor
-0.3
351
Tumor
-0.3
537
Tumor
-0.3
367
Tumor
-0.3
283
Tumor
-0.3
313
Tumor
-0.3
724
Normal
-0.4
965
Tumor
-0.4
963
Tumor
-0.4
695
Tumor
-0.4
958
Normal
-0.4
498
Normal
-0.4
563
Tumor
-0.4
952
Normal
-0.4
1042
Normal
-0.4
516
Normal
-0.4
477
Tumor
-0.4
617
Tumor
-0.4
957
Tumor
-0.4
471
Tumor
-0.4
415
Tumor
-0.5
956
Normal
-0.5
363
Tumor
-0.5
968
Normal
-0.5
497
Tumor
-0.5
661
Tumor
-0.5
524
Normal
-0.5
545
Tumor
-0.6
983
Tumor
-0.6
975
Tumor
-0.6
924
Normal
-0.6
492
Normal
-0.6
951
Tumor
-0.6
211
Tumor
-0.6
954
Normal
-0.6
916
Normal
-0.7
923
Tumor
-0.7
538
Normal
-0.7
355
Tumor
-0.7
937
Tumor
-0.8
917
Tumor
-0.8
478
Normal
-0.8
943
Tumor
-0.8
976
Normal
-0.8
925
Tumor
-0.9
571
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
