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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.8
nTPM
HPA Brain:
32.1
nTPM
GTEx:
48.8
nTPM
FANTOM5:
74.7
Scaled Tags Per Million
Pig:
14.2
nTPM
Mouse:
53.6
nTPM
Allen mouse:
0.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
32.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 28.6
1870
Female, age 42, unknown
37.1
2411
Female, age 72, unknown
36.6
1833
Male, age 53, unknown
34.7
1830
Male, age 51, unknown
30.8
2019
Male, age 18, unknown
29.2
2828
Female, age 72, unknown
25.8
2666
Male, age 74, left hemisphere
24.6
1827
Male, age 72, unknown
22.9
2586
Male, age 75, left hemisphere
22.9
2219
Male, age 76, both hemispheres
21.2
Dorsal raphe nucleus nTPM: 30.0
2298
Female, age 72, unknown
33.2
2750
Male, age 76, both hemispheres
33.1
2016
Female, age 72, unknown
28.4
2047
Male, age 72, unknown
28.0
1828
Male, age 53, unknown
27.4
Inferior colliculus nTPM: 27.3
1848
Female, age 42, unknown
30.5
2849
Male, age 72, unknown
28.5
1890
Male, age 53, unknown
25.5
2097
Female, age 72, unknown
24.7
Median raphe nucleus nTPM: 26.5
2220
Male, age 76, midline
26.5
Periaquaductal grey, anterior nTPM: 21.4
1795
Male, age 51, unknown
21.9
1947
Male, age 18, unknown
21.8
2502
Female, age 75, unknown
20.4
Periaquaductal grey, dorsal nTPM: 28.6
2850
Male, age 76, both hemispheres
32.5
1831
Male, age 72, unknown
27.9
2464
Female, age 72, unknown
27.8
1840
Male, age 53, unknown
26.3
Periaquaductal grey, lateral nTPM: 30.9
2053
Male, age 18, unknown
34.7
2272
Male, age 74, both hemispheres
34.5
2140
Male, age 76, both hemispheres
23.6
Pretectal area nTPM: 28.1
2273
Male, age 74, both hemispheres
39.8
1815
Male, age 53, unknown
33.1
2224
Female, age 72, unknown
30.2
1817
Female, age 42, unknown
29.1
2007
Male, age 72, unknown
28.5
2825
Male, age 18, unknown
26.6
2407
Male, age 75, both hemispheres
25.5
2316
Male, age 76, right hemisphere
25.2
1944
Female, age 72, unknown
24.1
2667
Female, age 75, unknown
23.7
1816
Male, age 51, unknown
23.3
Red nucleus nTPM: 32.1
1821
Female, age 72, unknown
40.2
1954
Female, age 42, unknown
38.0
1865
Male, age 51, unknown
37.7
1904
Male, age 53, unknown
34.3
2227
Male, age 72, unknown
32.7
2503
Female, age 72, unknown
32.7
2823
Male, age 76, right hemisphere
31.7
2785
Male, age 18, unknown
31.1
2725
Female, age 75, unknown
29.8
2769
Male, age 72, unknown
29.7
2584
Male, age 75, left hemisphere
25.3
2588
Male, age 74, left hemisphere
21.6
Substantia nigra nTPM: 29.6
2665
Male, age 74, both hemispheres
38.6
2699
Male, age 18, unknown
31.9
1941
Male, age 53, unknown
30.8
2590
Female, age 75, unknown
30.6
2241
Male, age 72, unknown
30.4
1851
Male, age 51, unknown
29.7
1916
Female, age 42, unknown
28.1
1889
Female, age 72, unknown
27.2
2583
Male, age 75, right hemisphere
27.2
2409
Female, age 72, unknown
21.9
Superior colliculus nTPM: 28.1
1913
Female, age 42, unknown
34.7
2668
Female, age 75, unknown
34.5
1995
Male, age 72, unknown
34.4
1895
Male, age 76, right hemisphere
30.9
2587
Male, age 74, left hemisphere
30.7
1839
Male, age 51, unknown
28.9
1796
Male, age 53, unknown
22.4
2261
Male, age 18, unknown
22.2
2087
Female, age 72, unknown
21.7
2664
Male, age 75, both hemispheres
21.0
Ventral tegmental area nTPM: 28.4
2223
Female, age 72, unknown
34.5
2410
Female, age 72, unknown
32.5
1915
Female, age 42, unknown
29.0
2021
Male, age 53, unknown
26.1
2218
Male, age 76, both hemispheres
24.5
1942
Male, age 51, unknown
23.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 48.8
Samples: 139
Max nTPM: 109.3
Min nTPM: 28.6
Std nTPM: 13.5
Median nTPM: 46.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
109.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
101.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
86.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
79.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
78.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
74.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
73.7
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
72.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
71.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
69.9
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
69.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
69.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
68.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
67.1
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
64.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
63.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
63.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
62.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
62.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
62.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
61.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
61.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
61.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
61.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
60.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
59.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
58.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
58.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
57.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
57.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
57.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
56.2
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
56.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
55.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
55.9
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
55.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
55.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
54.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
53.9
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
53.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
53.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
52.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
52.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
51.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
51.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
51.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
51.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
51.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
51.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
51.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
50.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
50.4
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
50.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
49.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
49.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
49.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
49.6
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
49.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
49.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
48.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
48.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
48.5
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
48.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
48.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
48.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
47.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
46.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
46.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
46.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
46.3
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
46.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
45.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
44.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
44.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
44.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
44.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
44.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
44.3
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
44.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
43.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
43.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
43.0
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
42.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
42.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
41.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
41.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
41.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
41.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
41.1
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
41.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
40.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
40.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
40.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
40.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
40.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
40.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
39.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
39.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
39.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
39.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
39.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
38.7
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
38.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
38.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
38.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
38.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
38.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
38.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
38.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
37.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
37.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
37.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
37.5
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
36.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
36.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
36.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
36.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
36.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
36.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
35.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
35.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
35.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
35.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
35.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
34.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
34.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
34.6
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
34.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
34.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
33.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
33.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
33.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
32.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
31.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
31.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
29.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
28.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
28.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
53.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 53.6
Samples: 4
Max nTPM: 54.6
Min nTPM: 51.9
Sample A
Male
54.6
Sample B
Male
53.8
Sample C
Female
53.9
Sample D
Female
51.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.