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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM43 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
102.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
81.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
71.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
60.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
51.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
45.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
44.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
43.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
42.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
37.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
37.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
34.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
32.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
30.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
29.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
28.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
28.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
28.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
27.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
25.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
24.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
23.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
23.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
22.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
21.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
21.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
21.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
21.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
21.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
20.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
20.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
20.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
20.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
20.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
20.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
20.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
19.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
19.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
19.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
19.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
18.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
18.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
17.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.3
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
17.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
16.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
16.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
16.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
16.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
15.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
15.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
15.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
15.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
15.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
15.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
15.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
14.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
14.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
14.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
14.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
14.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
13.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
13.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
13.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
13.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
13.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
13.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
12.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
12.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
12.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
12.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
12.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
12.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
12.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
11.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
11.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
11.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
11.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
11.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
11.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
11.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
10.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
10.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
10.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
10.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
10.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
10.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
10.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10.1
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
10.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
10.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
9.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
9.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
9.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
9.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
9.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
9.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
8.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
8.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
8.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
8.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.1
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
8.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
7.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
7.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
7.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.4
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
7.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
7.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
7.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
7.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
6.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
6.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
6.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
6.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
6.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
5.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
5.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
5.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
4.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
3.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
3.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMEM43 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.1
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
57.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
44.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
42.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
39.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
38.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
37.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
37.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
37.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
37.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
36.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
33.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
31.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
31.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
31.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
29.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
28.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
27.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
26.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
26.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
25.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
24.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
24.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
23.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
23.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
22.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
22.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
22.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
22.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
21.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
21.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
21.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
20.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
20.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
20.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
20.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
20.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
20.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
19.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
19.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
19.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
19.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
19.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
18.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
18.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
18.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
18.4
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
17.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
17.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
17.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
16.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
16.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
16.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
16.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
16.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
16.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
15.9
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
15.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.5
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
15.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
14.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
14.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
14.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
13.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
13.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
13.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
13.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
13.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
13.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
12.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
12.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
12.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
12.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
11.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
11.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
11.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
11.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
11.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
11.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
11.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
10.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
10.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
10.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
10.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
10.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
10.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
10.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
10.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
10.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
9.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
9.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
9.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
9.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
9.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
9.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
8.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
8.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
8.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
8.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
8.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
7.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
7.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
7.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
6.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.6
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
6.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
5.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
311
Tumor
0.9
685
Tumor
0.9
351
Tumor
0.9
536
Normal
0.8
917
Tumor
0.8
192
Normal
0.7
211
Tumor
0.6
491
Tumor
0.6
444
Normal
0.6
567
Tumor
0.5
478
Normal
0.5
958
Normal
0.5
535
Tumor
0.4
963
Tumor
0.4
492
Normal
0.4
185
Tumor
0.4
857
Tumor
0.4
421
Tumor
0.4
713
Tumor
0.4
283
Tumor
0.4
188
Normal
0.4
445
Tumor
0.4
384
Normal
0.4
785
Tumor
0.4
627
Tumor
0.4
498
Normal
0.4
1015
Tumor
0.3
715
Tumor
0.3
126
Normal
0.3
538
Normal
0.3
1032
Normal
0.3
943
Tumor
0.3
446
Normal
0.3
563
Tumor
0.3
925
Tumor
0.3
982
Normal
0.3
978
Normal
0.3
231
Tumor
0.3
146
Normal
0.3
186
Normal
0.3
268
Normal
0.3
852
Normal
0.3
332
Normal
0.3
938
Normal
0.3
641
Tumor
0.3
881
Tumor
0.3
823
Tumor
0.3
455
Tumor
0.3
364
Normal
0.3
343
Tumor
0.3
331
Tumor
0.3
124
Normal
0.2
214
Normal
0.2
716
Normal
0.2
741
Tumor
0.2
1014
Normal
0.2
447
Tumor
0.2
983
Tumor
0.2
365
Tumor
0.2
874
Normal
0.2
1031
Tumor
0.2
213
Tumor
0.2
483
Tumor
0.2
383
Tumor
0.2
916
Normal
0.2
912
Normal
0.2
412
Normal
0.2
524
Normal
0.2
572
Normal
0.2
448
Normal
0.2
224
Normal
0.2
297
Tumor
0.2
1044
Normal
0.2
435
Tumor
0.2
356
Normal
0.2
172
Normal
0.2
1042
Normal
0.2
915
Tumor
0.2
975
Tumor
0.2
813
Tumor
0.2
171
Tumor
0.2
466
Normal
0.2
721
Tumor
0.2
494
Normal
0.2
984
Normal
0.2
695
Tumor
0.2
138
Normal
0.2
314
Normal
0.2
671
Tumor
0.2
742
Normal
0.2
222
Normal
0.2
516
Normal
0.2
221
Tumor
0.2
697
Tumor
0.2
926
Normal
0.2
727
Tumor
0.2
951
Tumor
0.2
744
Normal
0.2
354
Normal
0.2
922
Normal
0.2
525
Tumor
0.1
395
Tumor
0.1
422
Normal
0.1
824
Normal
0.1
195
Tumor
0.1
212
Normal
0.1
954
Normal
0.1
358
Normal
0.1
196
Normal
0.1
262
Normal
0.1
1028
Normal
0.1
661
Tumor
0.1
355
Tumor
0.1
328
Normal
0.1
388
Normal
0.1
648
Normal
0.1
128
Normal
0.1
137
Tumor
0.1
278
Normal
0.1
217
Tumor
0.1
738
Normal
0.1
615
Tumor
0.1
815
Tumor
0.1
966
Normal
0.1
162
Normal
0.1
427
Tumor
0.1
976
Normal
0.1
1041
Tumor
0.1
818
Normal
0.1
672
Normal
0.1
148
Normal
0.1
112
Tumor
0.1
878
Normal
0.1
921
Tumor
0.1
312
Normal
0.1
877
Tumor
0.1
686
Normal
0.1
452
Normal
0.1
191
Tumor
0.1
272
Normal
0.1
434
Normal
0.1
977
Tumor
0.1
352
Normal
0.1
474
Normal
0.1
534
Normal
0.1
724
Normal
0.1
362
Normal
0.1
664
Normal
0.1
817
Tumor
0.1
416
Normal
0.1
918
Normal
0.1
956
Normal
0.1
965
Tumor
0.1
375
Tumor
0.1
161
Tumor
0.1
481
Tumor
0.1
142
Normal
0.1
628
Normal
0.1
391
Tumor
0.1
114
Normal
0.1
413
Tumor
0.1
132
Normal
0.1
1046
Normal
0.1
662
Normal
0.1
131
Tumor
0.1
923
Tumor
0.1
261
Tumor
0.1
696
Normal
0.1
816
Normal
0.1
851
Tumor
0.1
636
Normal
0.1
426
Normal
0.1
1016
Normal
0.1
484
Normal
0.0
1045
Tumor
0.0
424
Normal
0.0
342
Normal
0.0
284
Normal
0.0
467
Tumor
0.0
411
Tumor
0.0
964
Normal
0.0
514
Normal
0.0
125
Tumor
0.0
557
Tumor
0.0
1022
Normal
0.0
574
Normal
0.0
924
Normal
0.0
968
Normal
0.0
882
Normal
0.0
473
Tumor
0.0
647
Tumor
0.0
618
Normal
0.0
366
Normal
0.0
944
Normal
0.0
482
Normal
0.0
814
Normal
0.0
465
Tumor
0.0
258
Normal
0.0
617
Tumor
0.0
953
Tumor
0.0
488
Normal
0.0
432
Normal
0.0
267
Tumor
0.0
464
Normal
0.0
111
Normal
0.0
911
Tumor
0.0
363
Tumor
0.0
883
Tumor
0.0
136
Normal
0.0
394
Normal
0.0
642
Normal
0.0
786
Normal
0.0
415
Tumor
0.0
386
Normal
0.0
392
Normal
0.0
367
Tumor
0.0
722
Normal
0.0
433
Tumor
0.0
952
Normal
0.0
558
Normal
0.0
568
Normal
0.0
127
Tumor
0.0
436
Normal
0.0
428
Normal
0.0
223
Tumor
0.0
344
Normal
0.0
277
Tumor
0.0
472
Normal
0.0
471
Tumor
0.0
414
Normal
0.0
385
Tumor
0.0
698
Normal
0.0
866
Normal
0.0
728
Normal
0.0
227
Tumor
0.0
387
Tumor
0.0
218
Normal
0.0
463
Tumor
0.0
861
Tumor
0.0
376
Normal
0.0
723
Tumor
0.0
546
Normal
0.0
1043
Tumor
0.0
573
Tumor
0.0
228
Normal
0.0
616
Normal
-0.1
862
Normal
-0.1
914
Normal
-0.1
737
Tumor
-0.1
867
Tumor
-0.1
863
Tumor
-0.1
868
Normal
-0.1
123
Tumor
-0.1
714
Normal
-0.1
873
Tumor
-0.1
468
Normal
-0.1
513
Tumor
-0.1
666
Normal
-0.1
858
Normal
-0.1
141
Tumor
-0.1
456
Normal
-0.1
396
Normal
-0.1
528
Normal
-0.1
756
Normal
-0.1
298
Normal
-0.1
743
Tumor
-0.1
368
Normal
-0.1
554
Normal
-0.1
493
Tumor
-0.1
864
Normal
-0.1
955
Tumor
-0.1
135
Tumor
-0.1
526
Normal
-0.1
187
Tumor
-0.1
746
Normal
-0.1
884
Normal
-0.1
1013
Tumor
-0.1
145
Tumor
-0.1
564
Normal
-0.1
423
Tumor
-0.1
113
Tumor
-0.1
518
Normal
-0.2
232
Normal
-0.2
665
Tumor
-0.2
571
Tumor
-0.2
1026
Normal
-0.2
341
Tumor
-0.2
537
Tumor
-0.2
755
Tumor
-0.2
357
Tumor
-0.2
913
Tumor
-0.2
285
Tumor
-0.2
517
Tumor
-0.2
286
Normal
-0.2
663
Tumor
-0.2
477
Tumor
-0.3
515
Tumor
-0.3
778
Normal
-0.3
361
Tumor
-0.3
327
Tumor
-0.3
981
Tumor
-0.3
431
Tumor
-0.3
487
Tumor
-0.3
271
Tumor
-0.3
1021
Tumor
-0.3
497
Tumor
-0.3
545
Tumor
-0.3
1027
Tumor
-0.3
967
Tumor
-0.4
553
Tumor
-0.4
451
Tumor
-0.4
313
Tumor
-0.4
533
Tumor
-0.4
937
Tumor
-0.4
1025
Tumor
-0.4
957
Tumor
-0.4
353
Tumor
-0.4
443
Tumor
-0.4
147
Tumor
-0.4
462
Normal
-0.5
777
Tumor
-0.5
461
Tumor
-0.6
425
Tumor
-0.6
393
Tumor
-0.6
523
Tumor
-0.6
745
Tumor
-0.6
257
Tumor
-0.7
635
Tumor
-0.7
527
Tumor
-0.7
865
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
