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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIAA0232 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
19.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
17.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
15.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
14.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
13.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
13.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
13.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
12.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
12.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
12.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
12.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
11.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
11.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
11.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
11.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
10.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
10.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.8
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
10.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
10.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
10.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
10.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
10.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
10.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
10.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
10.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
10.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
9.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
9.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
9.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
9.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
9.3
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
8.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
8.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
8.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
8.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
8.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
8.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
7.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
7.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
7.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
7.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
7.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
7.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
6.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
6.7
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
6.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
6.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
6.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
6.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
6.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
6.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
6.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
6.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
6.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
5.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
5.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
5.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
5.7
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
5.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
5.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
5.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
5.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
5.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
5.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
5.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
4.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
4.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
4.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
4.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
4.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
4.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.8
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.7
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
3.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
3.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
3.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
3.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.6
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
3.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
3.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
3.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
3.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
3.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
3.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
2.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
2.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
2.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
2.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
2.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
2.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
2.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
2.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
1.9
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KIAA0232 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.3
Number of samples
231
Samples
Sample
Description
TPM
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
19.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
18.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
17.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
17.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
16.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
15.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
15.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
15.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
15.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
15.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
15.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
14.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
13.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
13.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
13.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.4
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
13.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
12.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
12.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
12.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
12.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
11.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
11.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
11.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
11.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
11.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
11.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
11.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
11.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
10.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
10.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
10.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
10.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
10.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
10.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
10.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
10.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
10.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
9.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
9.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
9.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
9.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
9.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
8.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
8.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
8.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
8.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
8.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
8.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
8.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
8.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
8.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
7.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
7.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
7.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
7.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
7.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
7.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
7.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
7.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
7.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
7.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
7.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.7
DO45287
0 years, male, NA, stage:1, alive, 390 days
6.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
6.5
DO45205
0 years, female, NA, stage:2, dead, 90 days
6.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
6.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
6.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
6.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
5.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
5.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
5.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
5.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
5.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
5.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
5.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
5.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
4.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
4.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
4.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
4.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
4.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
4.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
4.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
4.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
4.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
4.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
3.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
3.7
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
3.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
2.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
2.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
2.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
745
Tumor
1.7
813
Tumor
1.4
312
Normal
1.3
311
Tumor
1.2
277
Tumor
1.2
515
Tumor
1.0
567
Tumor
0.9
727
Tumor
0.8
517
Tumor
0.8
297
Tumor
0.7
964
Normal
0.7
481
Tumor
0.7
451
Tumor
0.7
785
Tumor
0.6
553
Tumor
0.6
123
Tumor
0.6
814
Normal
0.6
514
Normal
0.6
723
Tumor
0.6
861
Tumor
0.6
873
Tumor
0.5
743
Tumor
0.5
981
Tumor
0.5
525
Tumor
0.5
573
Tumor
0.5
818
Normal
0.5
518
Normal
0.5
868
Normal
0.5
755
Tumor
0.5
462
Normal
0.4
746
Normal
0.4
554
Normal
0.4
742
Normal
0.4
356
Normal
0.4
728
Normal
0.4
328
Normal
0.4
472
Normal
0.4
546
Normal
0.4
867
Tumor
0.3
523
Tumor
0.3
858
Normal
0.3
976
Normal
0.3
445
Tumor
0.3
482
Normal
0.3
545
Tumor
0.3
958
Normal
0.3
721
Tumor
0.3
538
Normal
0.3
738
Normal
0.3
443
Tumor
0.3
533
Tumor
0.3
471
Tumor
0.3
363
Tumor
0.3
571
Tumor
0.3
474
Normal
0.3
968
Normal
0.3
477
Tumor
0.3
524
Normal
0.3
563
Tumor
0.3
857
Tumor
0.2
537
Tumor
0.2
113
Tumor
0.2
213
Tumor
0.2
411
Tumor
0.2
455
Tumor
0.2
756
Normal
0.2
786
Normal
0.2
824
Normal
0.2
1013
Tumor
0.2
478
Normal
0.2
415
Tumor
0.2
568
Normal
0.2
526
Normal
0.2
412
Normal
0.1
696
Normal
0.1
966
Normal
0.1
926
Normal
0.1
984
Normal
0.1
982
Normal
0.1
516
Normal
0.1
823
Tumor
0.1
863
Tumor
0.1
467
Tumor
0.1
112
Tumor
0.1
534
Normal
0.1
355
Tumor
0.1
364
Normal
0.1
468
Normal
0.1
327
Tumor
0.1
456
Normal
0.1
724
Normal
0.1
944
Normal
0.1
497
Tumor
0.1
464
Normal
0.1
416
Normal
0.1
852
Normal
0.1
866
Normal
0.1
491
Tumor
0.1
465
Tumor
0.1
938
Normal
0.1
436
Normal
0.1
978
Normal
0.1
461
Tumor
0.1
977
Tumor
0.0
741
Tumor
0.0
937
Tumor
0.0
528
Normal
0.0
1016
Normal
0.0
127
Tumor
0.0
452
Normal
0.0
778
Normal
0.0
983
Tumor
0.0
498
Normal
0.0
1014
Normal
0.0
925
Tumor
0.0
686
Normal
0.0
744
Normal
0.0
513
Tumor
0.0
737
Tumor
0.0
564
Normal
0.0
862
Normal
0.0
574
Normal
0.0
435
Tumor
0.0
527
Tumor
0.0
851
Tumor
-0.1
494
Normal
-0.1
191
Tumor
-0.1
695
Tumor
-0.1
955
Tumor
-0.1
922
Normal
-0.1
558
Normal
-0.1
915
Tumor
-0.1
956
Normal
-0.1
192
Normal
-0.1
572
Normal
-0.1
777
Tumor
-0.1
685
Tumor
-0.1
817
Tumor
-0.1
466
Normal
-0.1
484
Normal
-0.1
195
Tumor
-0.1
963
Tumor
-0.1
954
Normal
-0.1
816
Normal
-0.1
924
Normal
-0.1
1015
Tumor
-0.2
815
Tumor
-0.2
125
Tumor
-0.2
124
Normal
-0.2
874
Normal
-0.2
221
Tumor
-0.2
473
Tumor
-0.2
488
Normal
-0.2
114
Normal
-0.2
196
Normal
-0.2
865
Tumor
-0.2
434
Normal
-0.2
214
Normal
-0.2
331
Tumor
-0.2
557
Tumor
-0.2
444
Normal
-0.2
493
Tumor
-0.2
218
Normal
-0.2
917
Tumor
-0.3
918
Normal
-0.3
463
Tumor
-0.3
128
Normal
-0.3
713
Tumor
-0.3
222
Normal
-0.3
332
Normal
-0.3
921
Tumor
-0.3
714
Normal
-0.4
965
Tumor
-0.4
314
Normal
-0.4
957
Tumor
-0.4
446
Normal
-0.4
975
Tumor
-0.4
492
Normal
-0.4
111
Normal
-0.4
716
Normal
-0.4
433
Tumor
-0.4
864
Normal
-0.4
952
Normal
-0.4
715
Tumor
-0.4
916
Normal
-0.4
217
Tumor
-0.5
487
Tumor
-0.5
953
Tumor
-0.5
431
Tumor
-0.5
967
Tumor
-0.5
483
Tumor
-0.5
126
Normal
-0.5
722
Normal
-0.6
923
Tumor
-0.6
432
Normal
-0.7
943
Tumor
-0.7
951
Tumor
-0.8
278
Normal
-1.3
298
Normal
-1.5
313
Tumor
-2.1
351
Tumor
N/A
231
Tumor
N/A
352
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
354
Normal
N/A
357
Tumor
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
615
Tumor
N/A
616
Normal
N/A
617
Tumor
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
627
Tumor
N/A
628
Normal
N/A
635
Tumor
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
423
Tumor
N/A
665
Tumor
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
447
Tumor
N/A
448
Normal
N/A
211
Tumor
N/A
212
Normal
N/A
697
Tumor
N/A
698
Normal
N/A
341
Tumor
N/A
342
Normal
N/A
343
Tumor
N/A
223
Tumor
N/A
344
Normal
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
