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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LSM3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
23.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
18.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
17.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
16.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
15.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
15.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
15.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
14.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
14.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
13.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
13.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
13.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
12.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
10.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
9.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
7.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
7.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
7.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
5.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LSM3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
25.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
21.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
20.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
20.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
18.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
18.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
17.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
17.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
17.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
17.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
16.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
15.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
15.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
15.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
14.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
14.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
14.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
14.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
13.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
13.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
13.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
13.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
13.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
13.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
12.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
12.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
12.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
12.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
12.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
12.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
12.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
12.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
11.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
11.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
11.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
11.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
11.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
11.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
11.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
11.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
11.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
11.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
11.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
11.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
11.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
11.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
11.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
11.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
11.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
11.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
11.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
11.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
10.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
10.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
10.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
10.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
10.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
10.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
10.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
10.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
10.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
10.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
10.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
10.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
10.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
10.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
10.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
10.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
10.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
10.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
10.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
10.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
10.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
10.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
9.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
9.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
9.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
9.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
9.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
9.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
9.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
9.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
9.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
9.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
9.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
9.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
9.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
9.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
9.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
9.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
9.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
9.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
9.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
9.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
8.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
8.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
8.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
8.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
8.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
8.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
8.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
8.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
8.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
8.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
8.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
8.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
8.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
8.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
8.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
8.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
8.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
8.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
8.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
8.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
8.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
8.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
8.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
8.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
8.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
8.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
8.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
8.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
7.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
7.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
7.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
7.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
7.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
7.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
7.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
7.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
7.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
7.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
7.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
7.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
7.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
7.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
7.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
7.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
7.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
7.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
7.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
7.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
7.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
6.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
6.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
6.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
6.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
5.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
5.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
3.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LSM3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
20.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
16.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
16.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
15.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
14.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
14.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
13.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
13.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
13.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
13.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
12.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
12.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
12.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
12.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
11.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
11.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
11.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
11.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
10.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
10.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
10.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
10.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
10.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
9.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
9.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
8.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
8.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
8.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
8.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
7.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
7.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
6.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LSM3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
28.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
24.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
23.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
22.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
21.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
21.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
20.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
20.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
19.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
19.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
18.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
17.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
16.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
16.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
16.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
16.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
16.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
16.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
15.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
15.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
15.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
15.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
15.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
15.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
14.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
14.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
14.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
14.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
14.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
14.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
14.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
14.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
13.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
13.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
13.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
13.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
13.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
13.1
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
12.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
12.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
12.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
12.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
12.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
12.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
12.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
11.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
11.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
11.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
11.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
11.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
11.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
11.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
11.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
11.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
11.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
10.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
10.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
10.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
10.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
10.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
10.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
10.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
10.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
10.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
10.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
9.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
9.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
9.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
9.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
9.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
9.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
9.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
9.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
9.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
9.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
9.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
8.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
8.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
8.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
7.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
7.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
7.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
6.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
6.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
6.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
4.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
4.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
4.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
4.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
3.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
3.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0009060003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0012900004
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0017850003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0063320003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0092290003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0078990003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0026410003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0088550004
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0078830003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0065430003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0012640003
Normal
0.1
CPT0012770003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0023350003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0011410003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0077320001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0086870003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0086830003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0092740003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0025350003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0025290003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0013790003
Normal
-0.2
CPT0001180009
Tumor
-0.2
CPT0079230003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0015810003
Tumor
-0.3
CPT0078660003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0087050003
Normal
-0.3
CPT0063640001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
