HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.6 nTPM
HPA Brain:7.1 nTPM
GTEx:14.6 nTPM
FANTOM5:15.9 Scaled Tags Per Million
Mouse:34.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053640
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 7.1
Sample id Sample description nTPM
Hippocampus
nTPM: 6.7
1898 Male, age 80, left hemisphere 8.6
1855 Male, age 76, left hemisphere 7.0
2529 Female, age 94, left hemisphere 6.3
1911 Female, age 85, right hemisphere 6.2
2148 Female, age 91, left hemisphere 6.1
2621 Female, age 67, right hemisphere 5.9
Dentate gyrus
nTPM: 6.4
2010 Male, age 76, both hemispheres 7.6
1927 Female, age 91, both hemispheres 7.4
2246 Female, age 85, both hemispheres 6.5
2530 Female, age 94, left hemisphere 6.3
2531 Female, age 67, both hemispheres 6.3
2528 Male, age 74, both hemispheres 4.5
Entorhinal gyrus
nTPM: 5.8
1938 Female, age 85, left hemisphere 6.7
1787 Male, age 76, left hemisphere 6.3
2117 Female, age 91, right hemisphere 6.2
2686 Male, age 75, right hemisphere 6.2
2764 Male, age 80, right hemisphere 5.7
2613 Female, age 94, left hemisphere 3.6
Hippocampus, CA1
nTPM: 6.4
1873 Female, age 85, both hemispheres 7.7
2045 Male, age 76, both hemispheres 7.1
2749 Male, age 80, left hemisphere 6.7
2527 Male, age 74, both hemispheres 6.0
2082 Female, age 91, right hemisphere 4.5
Hippocampus, CA2
nTPM: 6.6
1892 Male, age 76, both hemispheres 9.2
1963 Male, age 80, left hemisphere 7.4
2249 Male, age 74, both hemispheres 6.8
1940 Female, age 85, left hemisphere 6.7
2437 Female, age 94, left hemisphere 5.1
2113 Female, age 91, right hemisphere 4.7
Hippocampus, CA3
nTPM: 6.5
1867 Male, age 76, both hemispheres 7.6
1891 Female, age 85, both hemispheres 7.1
2436 Male, age 74, both hemispheres 6.4
2861 Female, age 67, both hemispheres 6.3
2137 Male, age 80, left hemisphere 5.9
2620 Female, age 94, left hemisphere 5.9
Parahippocampal cortex
nTPM: 6.4
1850 Male, age 80, both hemispheres 8.5
2532 Female, age 72, left hemisphere 7.5
2018 Male, age 76, both hemispheres 7.1
2692 Male, age 74, both hemispheres 7.1
1933 Female, age 85, both hemispheres 6.6
1990 Female, age 91, right hemisphere 6.3
2693 Female, age 94, both hemispheres 5.9
2245 Female, age 91, both hemispheres 5.7
2250 Female, age 67, right hemisphere 5.6
2622 Female, age 67, right hemisphere 4.1
Perirhinal gyrus
nTPM: 7.1
1794 Male, age 80, right hemisphere 7.7
1847 Female, age 91, left hemisphere 7.7
1841 Female, age 85, right hemisphere 7.4
2848 Male, age 76, right hemisphere 6.5
2521 Female, age 94, right hemisphere 6.3
Subiculum
nTPM: 6.1
1977 Female, age 85, both hemispheres 7.4
2042 Male, age 76, both hemispheres 7.0
1901 Male, age 80, both hemispheres 5.9
2438 Female, age 94, left hemisphere 5.9
2729 Female, age 91, right hemisphere 5.7
2619 Male, age 74, both hemispheres 5.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.6
Samples: 197

Max nTPM: 32.1
Min nTPM: 7.5
Std nTPM: 2.9
Median nTPM: 14.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 32.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 24.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 23.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 22.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 21.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 20.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 19.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 19.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 19.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 19.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.9
FF:10169-103B7 60 years, female 20.7
FF:10153-102I9 76 years, female 11.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 34.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 32.9
Min nTPM: 28.9
Sample A Male 32.2
Sample B Male 31.5
Sample C Female 32.9
Sample D Female 28.9
Hippocampal formation
nTPM: 34.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 32.5
Sample A Male 39.4
Sample B Male 32.5
Sample C Female 32.5
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
74658242 Antisense, RP_060220_02_D08, Mouse strain C57BL/6J (56 days, male) 1.3
68162212 Antisense, RP_041122_01_G12, Mouse strain C57BL/6J (56 days, male) 1.1

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