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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRABD is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
60.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
52.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
52.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
45.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
45.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
41.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
40.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
38.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
36.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
32.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
32.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
32.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
31.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
29.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
29.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
24.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
23.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
23.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
22.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
22.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
21.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
21.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
20.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
19.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
18.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
18.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
16.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
15.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
15.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
13.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
13.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
12.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
12.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRABD is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
62.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
42.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
36.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
32.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
31.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
28.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
28.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
27.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
27.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
26.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
25.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
24.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
24.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
23.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
22.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
21.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
21.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
21.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
21.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
21.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
20.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
20.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
20.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
20.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
19.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
19.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
19.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
18.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
18.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
18.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
18.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
18.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
17.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
17.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
17.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
17.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
17.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
17.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
17.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
16.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
16.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
16.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
16.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
16.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
16.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
16.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
16.1
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
16.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
15.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
15.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
15.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.7
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
15.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
15.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
15.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
15.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
15.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
15.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
15.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
14.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
14.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
14.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
14.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
14.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
14.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
14.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
14.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
14.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
14.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
14.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
14.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
14.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
14.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
14.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
13.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
13.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
13.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
13.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
13.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
13.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
13.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
13.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
13.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
13.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
13.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
13.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
13.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
13.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
13.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
13.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
13.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
12.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
12.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
12.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
12.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
11.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
11.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
11.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
11.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
11.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
11.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
11.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
11.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
11.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
11.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
11.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
11.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
11.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
11.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
10.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
10.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
10.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
10.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
10.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
10.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
10.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
10.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
10.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
10.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
10.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
9.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
9.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
9.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
9.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
9.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
9.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
9.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
9.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
9.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
8.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
8.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
8.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
8.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
8.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
8.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
8.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
7.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
7.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
7.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
7.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
5.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRABD is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
35.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
34.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
33.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
31.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
28.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
28.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
27.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
25.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
24.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
23.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
23.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
23.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
21.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
20.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
19.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
19.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
19.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
18.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
18.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
17.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
17.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
17.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
17.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
15.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
15.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
15.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
14.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
14.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
13.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
13.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
13.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
12.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
11.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
11.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
6.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
5.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRABD is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
60.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
56.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
53.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
51.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
45.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
40.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
38.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
37.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
37.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
35.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
35.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
35.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
35.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
34.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
34.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
32.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
32.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
32.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
32.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
31.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
31.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
30.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
30.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
30.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
30.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
29.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
29.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
29.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
29.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
28.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
27.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
27.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
27.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
26.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
26.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
25.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
25.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
25.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
24.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
24.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
24.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
23.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
23.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
23.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
23.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
23.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
23.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
22.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
22.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
22.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
22.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
22.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
21.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
21.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
21.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
21.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
20.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
20.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
20.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
19.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
19.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
19.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
19.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
19.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
19.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
18.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
18.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
18.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
18.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
18.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
18.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
17.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
17.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
17.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
16.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
16.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
16.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
16.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
16.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
15.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
15.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
14.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
14.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
14.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
14.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
14.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
12.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
12.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
12.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
12.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
12.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
12.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
12.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
11.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
11.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
11.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
11.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
10.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
10.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
10.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
9.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
8.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
7.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
5.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
1.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001180009
Tumor
1.8
CPT0078660003
Tumor
1.2
CPT0012180003
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0012670003
Tumor
0.9
CPT0012550003
Tumor
0.8
CPT0014450004
Tumor
0.7
CPT0065430003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0086360003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0023690003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0024670003
Tumor
0.3
CPT0065450001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0092290003
Tumor
0.3
CPT0023710001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0001540009
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0006950001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0081620001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0076350001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0010110003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0079300001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0088690003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0006630003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0001230001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0079230003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0066430001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0066470004
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0025230003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0088970003
Tumor
-0.2
CPT0009060003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0086950003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0021240003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0014470001
Normal
-0.3
CPT0012090003
Normal
-0.3
CPT0017410003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0014130001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0018250001
Normal
-0.3
CPT0081990003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0077490003
Tumor
-0.4
CPT0025110003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0015910003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0088760003
Tumor
-0.5
CPT0024680001
Normal
-0.5
CPT0009020003
Normal
-0.5
CPT0066480003
Tumor
-0.5
CPT0085670003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0009080003
Normal
-0.7
CPT0000640003
Tumor
-0.7
CPT0012920003
Normal
-0.7
CPT0011240003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.