HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.1 nTPM
HPA Brain:44.8 nTPM
GTEx:20.1 nTPM
FANTOM5:39.7 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:32.5 nTPM
Allen mouse:9.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 44.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
2621 Female, age 67, right hemisphere 37.5
1898 Male, age 80, left hemisphere 37.3
2529 Female, age 94, left hemisphere 36.9
2148 Female, age 91, left hemisphere 36.4
1911 Female, age 85, right hemisphere 34.4
1855 Male, age 76, left hemisphere 34.3
Dentate gyrus
nTPM: 35.8
2530 Female, age 94, left hemisphere 39.3
2246 Female, age 85, both hemispheres 37.1
1927 Female, age 91, both hemispheres 36.0
2531 Female, age 67, both hemispheres 34.8
2010 Male, age 76, both hemispheres 34.7
2528 Male, age 74, both hemispheres 32.8
Entorhinal gyrus
nTPM: 40.6
2764 Male, age 80, right hemisphere 46.2
1787 Male, age 76, left hemisphere 44.5
1938 Female, age 85, left hemisphere 40.5
2686 Male, age 75, right hemisphere 38.0
2117 Female, age 91, right hemisphere 37.3
2613 Female, age 94, left hemisphere 36.9
Hippocampus, CA1
nTPM: 36.1
2749 Male, age 80, left hemisphere 41.6
2082 Female, age 91, right hemisphere 36.5
2527 Male, age 74, both hemispheres 36.3
1873 Female, age 85, both hemispheres 34.3
2045 Male, age 76, both hemispheres 31.8
Hippocampus, CA2
nTPM: 38.1
2437 Female, age 94, left hemisphere 45.1
1963 Male, age 80, left hemisphere 42.8
2113 Female, age 91, right hemisphere 36.7
1892 Male, age 76, both hemispheres 36.6
1940 Female, age 85, left hemisphere 35.8
2249 Male, age 74, both hemispheres 31.8
Hippocampus, CA3
nTPM: 37.2
1891 Female, age 85, both hemispheres 39.5
2137 Male, age 80, left hemisphere 39.4
2436 Male, age 74, both hemispheres 38.4
1867 Male, age 76, both hemispheres 37.4
2620 Female, age 94, left hemisphere 35.3
2861 Female, age 67, both hemispheres 33.3
Parahippocampal cortex
nTPM: 41.4
1850 Male, age 80, both hemispheres 48.9
2692 Male, age 74, both hemispheres 45.2
1933 Female, age 85, both hemispheres 44.0
2532 Female, age 72, left hemisphere 43.2
2245 Female, age 91, both hemispheres 40.7
2693 Female, age 94, both hemispheres 40.3
1990 Female, age 91, right hemisphere 40.2
2622 Female, age 67, right hemisphere 38.8
2018 Male, age 76, both hemispheres 36.7
2250 Female, age 67, right hemisphere 36.0
Perirhinal gyrus
nTPM: 44.8
1794 Male, age 80, right hemisphere 51.2
1847 Female, age 91, left hemisphere 46.0
1841 Female, age 85, right hemisphere 45.8
2848 Male, age 76, right hemisphere 40.7
2521 Female, age 94, right hemisphere 40.3
Subiculum
nTPM: 38.2
1977 Female, age 85, both hemispheres 43.1
1901 Male, age 80, both hemispheres 40.2
2619 Male, age 74, both hemispheres 40.2
2438 Female, age 94, left hemisphere 36.7
2042 Male, age 76, both hemispheres 35.5
2729 Female, age 91, right hemisphere 33.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 33.1
Min nTPM: 12.6
Std nTPM: 3.3
Median nTPM: 19.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 33.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 30.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 27.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 26.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 26.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 26.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 26.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 26.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 25.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.7
FF:10169-103B7 60 years, female 42.5
FF:10153-102I9 76 years, female 37.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 28.1
Min nTPM: 18.6
Sample A Female 28.1
Sample B Female 18.6
Sample C Male 18.7
Sample D Male 20.0
Dorsal hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 33.3
Min nTPM: 20.4
Sample A Female 33.3
Sample B Female 23.8
Sample C Male 21.9
Sample D Male 20.4
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 25.9
Min nTPM: 16.2
Sample A Female 25.9
Sample B Female 20.5
Sample C Male 20.2
Sample D Male 16.2
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 29.0
Min nTPM: 17.0
Sample A Female 29.0
Sample B Female 17.0
Sample C Male 26.2
Sample D Male 28.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 29.4
Min nTPM: 24.1
Sample A Male 29.4
Sample B Male 29.3
Sample C Female 25.3
Sample D Female 24.1
Hippocampal formation
nTPM: 32.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 26.1
Sample A Male 38.5
Sample B Male 30.1
Sample C Female 35.2
Sample D Female 26.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.9
71608202 Antisense, RP_050927_01_A10, Mouse strain C57BL/6J (56 days, male) 9.9

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