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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARMC10 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
31.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
22.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
21.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
19.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
18.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
16.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
16.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
15.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
15.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
15.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
15.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
15.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
15.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
13.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
13.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
12.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
12.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
12.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
12.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
12.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
12.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
12.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
12.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
11.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
11.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
11.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
11.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
11.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
11.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
11.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
11.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
11.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
10.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
10.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
10.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
10.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
10.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
10.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
10.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
9.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
9.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
9.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
9.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
9.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
9.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
9.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
9.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
8.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
8.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
8.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
8.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
8.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
8.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
8.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
8.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
8.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
8.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
8.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
8.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
8.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
8.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
8.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
7.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
7.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
7.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
7.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
7.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
7.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
7.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
7.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
7.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
7.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.1
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
7.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
6.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
6.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
6.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
6.6
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
6.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
6.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
6.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
6.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
6.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
6.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
6.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
6.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
6.1
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
6.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
6.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
6.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
6.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
5.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
5.8
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
5.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
5.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
5.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.3
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
5.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
5.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
5.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
5.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
5.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
4.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
4.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
4.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.5
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
4.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
4.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
3.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
3.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
3.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
3.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
3.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
3.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3.6
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
3.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
3.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
3.2
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
3.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.7
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
2.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
2.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
2.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
1.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.4
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ARMC10 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.6
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
150.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
45.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
34.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
32.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
29.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
29.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
28.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
28.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
28.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
26.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
26.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
26.1
DO50798
0 years, male, NA, stage:3, dead, 30 days
25.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
25.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
24.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
24.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
24.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
23.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
22.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
22.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
21.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
21.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
20.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
20.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
20.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
19.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
19.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
19.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
19.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
19.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
19.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
18.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
18.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
18.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
18.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
18.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
17.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
17.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
17.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
17.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
17.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
17.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
16.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
16.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.4
DO48697
0 years, female, NA, stage:2, dead, 810 days
16.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
16.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
16.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
15.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
15.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
15.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
15.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
15.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
15.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
15.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
15.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
15.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
15.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
14.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
14.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
14.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
14.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
14.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
14.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
14.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
14.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
13.9
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
13.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
13.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
13.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
13.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
13.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.1
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
12.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
12.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
12.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
12.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
12.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
12.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
12.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
12.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
12.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
12.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
12.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
12.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
11.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
11.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
11.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
11.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
11.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
11.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
11.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
11.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
11.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
11.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
10.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.3
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
10.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
10.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
10.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
10.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
10.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
9.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
9.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
9.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
9.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
9.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
9.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
8.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
8.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
8.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
7.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
6.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
5.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
4.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
911
Tumor
1.0
615
Tumor
0.8
481
Tumor
0.8
967
Tumor
0.8
745
Tumor
0.7
915
Tumor
0.7
231
Tumor
0.6
332
Normal
0.6
1041
Tumor
0.6
741
Tumor
0.5
785
Tumor
0.5
387
Tumor
0.5
571
Tumor
0.5
755
Tumor
0.5
925
Tumor
0.5
636
Normal
0.5
743
Tumor
0.5
1032
Normal
0.5
742
Normal
0.4
465
Tumor
0.4
298
Normal
0.4
388
Normal
0.4
415
Tumor
0.4
744
Normal
0.4
314
Normal
0.4
278
Normal
0.4
1026
Normal
0.4
627
Tumor
0.4
616
Normal
0.4
261
Tumor
0.4
227
Tumor
0.4
938
Normal
0.4
746
Normal
0.4
534
Normal
0.4
267
Tumor
0.4
195
Tumor
0.3
862
Normal
0.3
568
Normal
0.3
127
Tumor
0.3
723
Tumor
0.3
186
Normal
0.3
196
Normal
0.3
435
Tumor
0.3
695
Tumor
0.3
232
Normal
0.3
686
Normal
0.3
944
Normal
0.3
365
Tumor
0.3
148
Normal
0.3
1022
Normal
0.3
1015
Tumor
0.3
818
Normal
0.3
257
Tumor
0.3
572
Normal
0.3
1045
Tumor
0.3
868
Normal
0.3
698
Normal
0.3
564
Normal
0.3
1027
Tumor
0.3
824
Normal
0.3
648
Normal
0.3
448
Normal
0.3
786
Normal
0.3
954
Normal
0.3
462
Normal
0.3
878
Normal
0.2
716
Normal
0.2
738
Normal
0.2
1014
Normal
0.2
937
Tumor
0.2
952
Normal
0.2
132
Normal
0.2
955
Tumor
0.2
864
Normal
0.2
958
Normal
0.2
364
Normal
0.2
135
Tumor
0.2
142
Normal
0.2
445
Tumor
0.2
111
Normal
0.2
394
Normal
0.2
635
Tumor
0.2
483
Tumor
0.2
358
Normal
0.2
356
Normal
0.2
128
Normal
0.2
618
Normal
0.2
526
Normal
0.2
641
Tumor
0.2
665
Tumor
0.2
342
Normal
0.2
484
Normal
0.2
956
Normal
0.2
912
Normal
0.2
468
Normal
0.2
816
Normal
0.2
328
Normal
0.2
1046
Normal
0.2
436
Normal
0.2
327
Tumor
0.2
422
Normal
0.2
487
Tumor
0.2
191
Tumor
0.2
416
Normal
0.2
666
Normal
0.2
344
Normal
0.2
696
Normal
0.2
222
Normal
0.2
376
Normal
0.2
482
Normal
0.2
312
Normal
0.2
331
Tumor
0.2
396
Normal
0.2
778
Normal
0.2
664
Normal
0.2
412
Normal
0.2
714
Normal
0.2
642
Normal
0.2
557
Tumor
0.2
351
Tumor
0.2
488
Normal
0.2
558
Normal
0.2
756
Normal
0.2
478
Normal
0.2
513
Tumor
0.2
466
Normal
0.2
477
Tumor
0.2
214
Normal
0.2
858
Normal
0.2
1031
Tumor
0.2
363
Tumor
0.2
431
Tumor
0.2
354
Normal
0.2
728
Normal
0.1
861
Tumor
0.1
366
Normal
0.1
722
Normal
0.1
873
Tumor
0.1
978
Normal
0.1
352
Normal
0.1
258
Normal
0.1
228
Normal
0.1
472
Normal
0.1
421
Tumor
0.1
146
Normal
0.1
494
Normal
0.1
546
Normal
0.1
218
Normal
0.1
857
Tumor
0.1
1042
Normal
0.1
1028
Normal
0.1
368
Normal
0.1
672
Normal
0.1
867
Tumor
0.1
452
Normal
0.1
147
Tumor
0.1
172
Normal
0.1
966
Normal
0.1
392
Normal
0.1
968
Normal
0.1
883
Tumor
0.1
284
Normal
0.1
852
Normal
0.1
922
Normal
0.1
851
Tumor
0.1
984
Normal
0.1
114
Normal
0.1
268
Normal
0.1
162
Normal
0.1
262
Normal
0.1
913
Tumor
0.1
554
Normal
0.1
414
Normal
0.1
866
Normal
0.1
212
Normal
0.1
456
Normal
0.1
428
Normal
0.1
737
Tumor
0.1
528
Normal
0.1
423
Tumor
0.1
192
Normal
0.1
384
Normal
0.1
362
Normal
0.1
386
Normal
0.1
424
Normal
0.1
297
Tumor
0.1
964
Normal
0.1
628
Normal
0.1
517
Tumor
0.1
514
Normal
0.1
124
Normal
0.1
126
Normal
0.1
145
Tumor
0.0
474
Normal
0.0
573
Tumor
0.0
515
Tumor
0.0
136
Normal
0.0
1044
Normal
0.0
518
Normal
0.0
1025
Tumor
0.0
1016
Normal
0.0
391
Tumor
0.0
272
Normal
0.0
393
Tumor
0.0
647
Tumor
0.0
353
Tumor
0.0
982
Normal
0.0
563
Tumor
0.0
185
Tumor
0.0
882
Normal
0.0
976
Normal
0.0
713
Tumor
0.0
113
Tumor
0.0
361
Tumor
0.0
524
Normal
0.0
535
Tumor
0.0
777
Tumor
0.0
924
Normal
0.0
874
Normal
0.0
617
Tumor
0.0
446
Normal
0.0
224
Normal
0.0
221
Tumor
0.0
464
Normal
0.0
286
Normal
0.0
721
Tumor
0.0
493
Tumor
0.0
884
Normal
0.0
171
Tumor
0.0
473
Tumor
0.0
914
Normal
0.0
432
Normal
0.0
271
Tumor
-0.1
926
Normal
-0.1
434
Normal
-0.1
516
Normal
-0.1
451
Tumor
-0.1
461
Tumor
-0.1
574
Normal
-0.1
217
Tumor
-0.1
491
Tumor
-0.1
411
Tumor
-0.1
311
Tumor
-0.1
444
Normal
-0.1
981
Tumor
-0.1
471
Tumor
-0.1
685
Tumor
-0.1
161
Tumor
-0.1
213
Tumor
-0.1
918
Normal
-0.1
433
Tumor
-0.1
341
Tumor
-0.1
963
Tumor
-0.2
125
Tumor
-0.2
492
Normal
-0.2
538
Normal
-0.2
567
Tumor
-0.2
916
Normal
-0.2
921
Tumor
-0.2
815
Tumor
-0.2
1043
Tumor
-0.2
137
Tumor
-0.2
863
Tumor
-0.2
447
Tumor
-0.2
671
Tumor
-0.2
536
Normal
-0.2
715
Tumor
-0.2
375
Tumor
-0.2
951
Tumor
-0.2
545
Tumor
-0.2
977
Tumor
-0.3
141
Tumor
-0.3
223
Tumor
-0.3
112
Tumor
-0.3
443
Tumor
-0.3
383
Tumor
-0.3
285
Tumor
-0.3
527
Tumor
-0.3
983
Tumor
-0.3
367
Tumor
-0.3
277
Tumor
-0.3
123
Tumor
-0.3
553
Tumor
-0.3
455
Tumor
-0.3
917
Tumor
-0.3
943
Tumor
-0.3
385
Tumor
-0.3
498
Normal
-0.4
877
Tumor
-0.4
525
Tumor
-0.4
138
Normal
-0.4
881
Tumor
-0.4
537
Tumor
-0.4
313
Tumor
-0.4
131
Tumor
-0.4
823
Tumor
-0.4
724
Normal
-0.4
523
Tumor
-0.4
463
Tumor
-0.4
425
Tumor
-0.4
426
Normal
-0.4
1013
Tumor
-0.4
188
Normal
-0.5
865
Tumor
-0.5
953
Tumor
-0.5
395
Tumor
-0.5
1021
Tumor
-0.5
697
Tumor
-0.5
427
Tumor
-0.5
923
Tumor
-0.5
343
Tumor
-0.5
975
Tumor
-0.5
357
Tumor
-0.6
467
Tumor
-0.6
663
Tumor
-0.6
965
Tumor
-0.6
187
Tumor
-0.6
957
Tumor
-0.6
662
Normal
-0.6
533
Tumor
-0.6
355
Tumor
-0.7
727
Tumor
-0.7
813
Tumor
-0.8
413
Tumor
-0.8
497
Tumor
-0.8
283
Tumor
-0.8
814
Normal
-0.8
817
Tumor
-0.9
211
Tumor
-0.9
661
Tumor
-1.3
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
