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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPAS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
13.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
9.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
9.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
6.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
1.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPAS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
41.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
40.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
38.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
34.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
30.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
29.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
29.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
29.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
28.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
27.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
26.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
26.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
25.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
23.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
23.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
22.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
22.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
22.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
22.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
20.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
20.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
20.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
19.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
19.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
18.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
18.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
18.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
18.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
18.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
16.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
16.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
16.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
16.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
15.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
15.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
15.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
15.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
15.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
14.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
14.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
14.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
14.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
14.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
14.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
13.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
13.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
13.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
13.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
13.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
13.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
12.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
12.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
12.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
11.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
11.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
11.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
11.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
10.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
10.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
10.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
10.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
10.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
10.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
10.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
10.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
10.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
10.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
10.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
10.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
10.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
10.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
9.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
9.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
9.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
9.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
9.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
9.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
9.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
9.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
9.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
9.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
9.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
9.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
9.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
9.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
9.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
9.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
9.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
9.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
9.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
9.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
8.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
8.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
8.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
8.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
8.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
8.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
8.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
8.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
8.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
7.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
7.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
7.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
7.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
7.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
7.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
7.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
7.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
7.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
7.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
7.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
7.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
7.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
7.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
7.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
6.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
6.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
6.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
6.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
6.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
6.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
6.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
6.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
6.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
6.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
6.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
6.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
6.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
6.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
6.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
6.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
6.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
6.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
6.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
6.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
6.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
6.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
6.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
6.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
6.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
6.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
5.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
5.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
5.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
5.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
5.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
5.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
5.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
5.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
5.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
5.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
5.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
5.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
5.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
5.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
5.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
5.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
5.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
5.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
5.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
5.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
5.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
5.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
5.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
5.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
5.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
5.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
5.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
5.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
5.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
4.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
4.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
4.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
4.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
4.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
4.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
4.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
4.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
4.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
4.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
4.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
4.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
4.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
4.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
4.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
4.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
4.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
4.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
4.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
4.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
4.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
4.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
3.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
3.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
3.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
3.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
3.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
3.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
3.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
3.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
3.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
3.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
3.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
3.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
3.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
2.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
2.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
2.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
2.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
2.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
2.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
2.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
2.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
2.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
2.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
2.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
1.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPAS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
45.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
44.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
32.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
25.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
24.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
24.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
21.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
20.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
19.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
17.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
16.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
15.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
13.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
13.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
13.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
11.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
11.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
11.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
11.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
10.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
10.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
10.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
10.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
10.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
10.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
10.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
10.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
9.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
9.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
9.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
8.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
8.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
7.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
7.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
7.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
7.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
6.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
6.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
6.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
5.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
5.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
4.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NPAS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
123.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
113.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
94.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
92.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
92.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
85.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
83.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
78.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
76.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
76.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
76.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
73.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
68.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
67.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
66.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
65.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
65.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
63.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
62.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
61.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
59.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
58.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
58.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
57.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
57.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
57.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
56.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
56.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
55.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
55.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
54.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
54.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
54.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
53.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
52.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
51.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
51.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
51.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
50.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
49.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
48.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
47.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
47.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
47.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
46.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
46.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
44.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
44.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
44.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
43.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
42.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
42.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
42.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
42.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
41.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
40.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
40.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
40.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
39.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
39.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
38.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
38.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
38.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
38.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
38.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
37.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
36.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
36.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
35.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
34.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
34.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
33.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
33.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
33.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
33.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
33.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
32.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
32.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
32.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
32.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
32.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
31.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
31.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
31.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
31.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
31.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
31.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
31.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
30.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
29.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
29.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
28.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
28.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
27.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
27.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
27.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
26.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
26.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
25.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
25.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
25.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
25.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
24.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
24.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
24.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
23.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
23.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
23.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
23.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
22.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
22.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
21.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
21.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
21.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
21.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
20.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
19.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
18.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
17.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
17.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
17.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
16.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
15.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
15.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
14.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
13.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
11.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
11.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
10.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
10.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
10.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
9.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
8.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
5.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
2.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
