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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
METTL7B is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
122.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
681.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
482.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
454.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
444.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
433.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
410.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
385.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
384.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
338.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
336.5
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
334.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
334.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
317.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
304.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
295.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
295.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
287.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
285.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
278.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
265.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
264.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
263.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
262.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
255.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
250.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
248.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
244.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
242.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
242.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
241.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
239.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
237.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
226.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
226.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
225.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
224.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
223.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
223.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
220.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
218.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
218.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
216.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
215.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
215.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
214.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
214.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
214.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
213.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
213.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
212.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
211.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
209.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
209.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
208.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
208.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
207.9
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
206.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
206.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
203.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
198.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
196.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
193.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
192.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
191.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
190.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
189.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
187.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
186.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
186.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
183.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
181.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
181.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
178.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
175.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
174.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
174.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
172.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
171.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
170.5
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
170.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
169.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
169.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
168.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
168.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
168.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
167.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
166.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
165.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
164.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
164.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
161.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
161.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
159.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
156.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
156.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
155.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
152.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
150.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
150.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
149.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
149.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
148.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
147.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
147.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
146.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
145.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
144.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
144.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
143.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
143.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
143.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
139.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
139.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
139.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
138.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
138.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
137.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
136.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
136.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
135.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
134.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
133.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
133.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
133.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
133.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
132.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
132.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
131.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
130.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
129.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
128.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
127.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
127.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
127.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
126.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
125.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
125.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
124.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
124.8
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
124.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
123.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
123.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
122.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
122.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
121.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
121.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
121.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
120.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
120.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
119.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
119.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
119.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
118.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
118.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
117.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
117.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
117.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
117.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
116.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
114.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
113.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
113.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
112.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
112.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
111.2
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
110.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
110.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
109.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
109.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
109.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
108.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
107.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
107.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
107.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
106.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
106.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
105.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
105.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
103.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
103.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
103.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
103.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
102.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
102.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
102.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
102.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
101.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
101.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
101.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
100.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
100.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
99.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
99.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
99.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
98.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
98.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
97.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
97.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
97.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
96.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
95.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
95.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
95.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
94.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
94.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
93.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
93.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
92.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
92.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
92.0
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
91.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
91.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
90.6
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
90.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
90.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
89.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
89.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
89.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
88.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
88.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
87.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
87.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
87.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
87.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
86.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
85.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
85.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
84.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
84.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
84.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
82.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
81.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
80.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
79.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
79.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
78.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
78.5
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
78.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
77.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
76.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
76.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
76.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
76.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
76.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
75.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
73.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
73.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
72.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
71.9
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
71.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
70.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
69.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
69.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
68.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
67.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
66.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
65.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
65.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
65.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
64.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
64.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
64.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
63.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
63.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
62.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
62.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
61.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
61.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
61.6
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
60.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
59.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
59.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
59.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
59.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
58.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
57.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
57.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
56.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
55.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
55.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
55.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
53.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
53.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
53.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
52.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
52.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
51.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
50.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
50.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
50.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
49.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
49.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
49.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
49.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
48.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
48.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
47.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
46.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
46.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
45.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
44.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
44.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
44.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
43.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
43.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
43.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
42.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
42.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
42.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
42.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
42.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
41.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
41.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
41.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
40.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
40.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
40.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
39.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
39.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
38.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
37.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
37.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
37.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
37.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
36.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
35.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
34.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
34.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
34.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
33.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
33.8
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
33.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
33.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
32.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
32.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
32.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
30.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
30.8
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
29.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
29.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
29.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
26.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
26.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
25.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
25.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
25.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
23.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
22.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
20.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
19.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
17.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
16.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
15.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
10.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
10.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
METTL7B is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.4
Number of samples
231
Samples
Sample
Description
TPM
DO48751
0 years, male, NA, stage:2, dead, 480 days
445.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
366.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
297.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
271.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
240.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
234.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
231.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
221.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
217.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
210.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
208.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
204.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
203.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
199.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
197.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
194.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
191.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
188.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
187.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
183.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
175.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
174.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
172.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
168.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
165.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
165.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
164.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
157.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
155.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
155.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
155.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
154.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
153.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
152.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
151.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
149.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
148.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
147.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
145.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
142.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
141.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
141.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
139.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
137.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
136.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
136.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
133.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
132.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
129.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
128.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
127.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
126.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
126.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
125.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
124.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
124.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
124.8
DO48679
0 years, male, NA, stage:2, alive, 1200 days
122.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
118.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
118.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
118.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
117.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
117.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
117.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
116.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
115.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
114.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
113.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
113.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
112.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
112.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
111.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
108.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
108.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
107.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
107.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
106.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
105.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
101.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
98.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
96.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
96.7
DO45153
0 years, female, NA, stage:2, alive, 1380 days
95.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
93.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
93.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
91.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
90.9
DO45157
0 years, male, NA, stage:2, alive, 1980 days
90.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
89.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
89.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
88.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
87.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
87.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
87.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
86.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
85.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
85.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
84.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
84.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
83.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
83.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
82.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
82.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
78.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
77.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
77.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
75.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
74.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
73.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
73.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
73.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
73.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
73.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
72.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
72.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
72.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
71.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
71.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
71.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
71.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
70.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
69.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
69.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
69.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
68.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
67.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
67.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
67.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
66.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
65.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
65.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
64.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
64.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
63.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
62.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
62.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
62.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
62.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
61.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
60.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
60.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
59.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
58.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
58.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
57.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
57.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
56.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
55.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
55.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
55.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
54.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
54.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
54.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
53.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
53.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
53.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
53.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
52.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
51.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
50.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
50.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
49.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
49.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
49.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
48.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
48.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
48.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
47.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
46.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
46.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
45.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
45.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
44.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
44.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
44.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
43.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
43.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
42.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
40.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
40.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
39.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
38.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
37.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
37.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
36.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
35.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
34.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
34.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
33.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
33.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
32.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
31.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
30.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
29.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
29.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
28.7
DO45305
0 years, male, NA, stage:4, alive, 300 days
28.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
26.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
25.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
23.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
23.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
21.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
21.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
21.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
20.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
19.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
19.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
19.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
19.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
17.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
14.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
13.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
12.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
11.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
10.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
5.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.9
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.7
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
911
Tumor
1.2
452
Normal
1.1
278
Normal
1.1
128
Normal
1.1
744
Normal
1.1
745
Tumor
1.0
342
Normal
1.0
955
Tumor
1.0
358
Normal
1.0
388
Normal
0.9
223
Tumor
0.8
636
Normal
0.8
354
Normal
0.8
362
Normal
0.8
956
Normal
0.7
1041
Tumor
0.7
186
Normal
0.7
538
Normal
0.7
114
Normal
0.7
864
Normal
0.7
422
Normal
0.7
232
Normal
0.6
112
Tumor
0.6
741
Tumor
0.6
662
Normal
0.6
494
Normal
0.6
384
Normal
0.6
468
Normal
0.6
124
Normal
0.6
272
Normal
0.6
878
Normal
0.5
564
Normal
0.5
434
Normal
0.5
554
Normal
0.5
574
Normal
0.5
214
Normal
0.5
366
Normal
0.5
617
Tumor
0.5
312
Normal
0.5
228
Normal
0.5
944
Normal
0.5
376
Normal
0.5
698
Normal
0.5
332
Normal
0.5
568
Normal
0.5
746
Normal
0.5
915
Tumor
0.5
258
Normal
0.5
426
Normal
0.5
188
Normal
0.4
435
Tumor
0.4
952
Normal
0.4
261
Tumor
0.4
738
Normal
0.4
966
Normal
0.4
172
Normal
0.4
976
Normal
0.4
912
Normal
0.4
474
Normal
0.4
344
Normal
0.4
196
Normal
0.4
1014
Normal
0.4
314
Normal
0.4
672
Normal
0.4
412
Normal
0.4
383
Tumor
0.4
815
Tumor
0.4
352
Normal
0.4
432
Normal
0.4
572
Normal
0.4
642
Normal
0.4
132
Normal
0.3
138
Normal
0.3
414
Normal
0.3
1027
Tumor
0.3
456
Normal
0.3
535
Tumor
0.3
861
Tumor
0.3
857
Tumor
0.3
862
Normal
0.3
742
Normal
0.3
1032
Normal
0.3
448
Normal
0.3
1026
Normal
0.3
284
Normal
0.3
558
Normal
0.3
298
Normal
0.3
1044
Normal
0.3
914
Normal
0.3
958
Normal
0.3
262
Normal
0.3
954
Normal
0.3
723
Tumor
0.3
546
Normal
0.3
518
Normal
0.3
938
Normal
0.3
913
Tumor
0.3
392
Normal
0.3
142
Normal
0.2
136
Normal
0.2
696
Normal
0.2
618
Normal
0.2
628
Normal
0.2
722
Normal
0.2
816
Normal
0.2
1042
Normal
0.2
982
Normal
0.2
212
Normal
0.2
1022
Normal
0.2
466
Normal
0.2
423
Tumor
0.2
697
Tumor
0.2
446
Normal
0.2
465
Tumor
0.2
148
Normal
0.2
436
Normal
0.2
481
Tumor
0.2
516
Normal
0.2
126
Normal
0.2
484
Normal
0.2
918
Normal
0.2
224
Normal
0.2
356
Normal
0.2
648
Normal
0.2
867
Tumor
0.2
488
Normal
0.2
981
Tumor
0.2
922
Normal
0.2
874
Normal
0.1
813
Tumor
0.1
111
Normal
0.1
492
Normal
0.1
1028
Normal
0.1
866
Normal
0.1
616
Normal
0.1
445
Tumor
0.1
462
Normal
0.1
968
Normal
0.1
146
Normal
0.1
686
Normal
0.1
125
Tumor
0.1
137
Tumor
0.1
852
Normal
0.1
353
Tumor
0.1
924
Normal
0.1
666
Normal
0.1
444
Normal
0.0
778
Normal
0.0
851
Tumor
0.0
162
Normal
0.0
222
Normal
0.0
464
Normal
0.0
563
Tumor
0.0
716
Normal
0.0
424
Normal
0.0
433
Tumor
0.0
147
Tumor
0.0
1016
Normal
0.0
364
Normal
0.0
984
Normal
0.0
882
Normal
0.0
268
Normal
0.0
386
Normal
0.0
721
Tumor
0.0
526
Normal
0.0
824
Normal
-0.1
964
Normal
-0.1
286
Normal
-0.1
478
Normal
-0.1
1043
Tumor
-0.1
916
Normal
-0.1
515
Tumor
-0.1
127
Tumor
-0.1
361
Tumor
-0.1
267
Tumor
-0.1
737
Tumor
-0.1
957
Tumor
-0.1
534
Normal
-0.1
664
Normal
-0.1
926
Normal
-0.1
715
Tumor
-0.1
145
Tumor
-0.1
421
Tumor
-0.1
135
Tumor
-0.2
343
Tumor
-0.2
514
Normal
-0.2
756
Normal
-0.2
868
Normal
-0.2
665
Tumor
-0.2
524
Normal
-0.2
1046
Normal
-0.2
1045
Tumor
-0.2
884
Normal
-0.2
818
Normal
-0.2
714
Normal
-0.2
416
Normal
-0.2
428
Normal
-0.2
328
Normal
-0.2
477
Tumor
-0.2
873
Tumor
-0.2
482
Normal
-0.3
123
Tumor
-0.3
571
Tumor
-0.3
858
Normal
-0.3
368
Normal
-0.3
528
Normal
-0.3
394
Normal
-0.3
357
Tumor
-0.3
513
Tumor
-0.3
367
Tumor
-0.3
978
Normal
-0.3
1025
Tumor
-0.3
451
Tumor
-0.3
472
Normal
-0.3
415
Tumor
-0.3
396
Normal
-0.3
171
Tumor
-0.3
814
Normal
-0.4
1013
Tumor
-0.4
498
Normal
-0.4
431
Tumor
-0.4
728
Normal
-0.4
351
Tumor
-0.4
527
Tumor
-0.4
517
Tumor
-0.4
297
Tumor
-0.4
413
Tumor
-0.4
536
Normal
-0.4
786
Normal
-0.4
257
Tumor
-0.4
461
Tumor
-0.5
785
Tumor
-0.5
943
Tumor
-0.5
533
Tumor
-0.5
191
Tumor
-0.5
823
Tumor
-0.5
755
Tumor
-0.5
391
Tumor
-0.5
443
Tumor
-0.5
537
Tumor
-0.5
471
Tumor
-0.6
427
Tumor
-0.6
331
Tumor
-0.6
387
Tumor
-0.6
161
Tumor
-0.6
187
Tumor
-0.6
363
Tumor
-0.6
341
Tumor
-0.6
1015
Tumor
-0.6
447
Tumor
-0.6
967
Tumor
-0.6
231
Tumor
-0.6
493
Tumor
-0.6
355
Tumor
-0.6
817
Tumor
-0.6
615
Tumor
-0.6
545
Tumor
-0.7
467
Tumor
-0.7
953
Tumor
-0.7
218
Normal
-0.7
192
Normal
-0.7
285
Tumor
-0.7
113
Tumor
-0.7
141
Tumor
-0.7
195
Tumor
-0.7
327
Tumor
-0.7
713
Tumor
-0.7
627
Tumor
-0.8
923
Tumor
-0.8
185
Tumor
-0.8
727
Tumor
-0.8
983
Tumor
-0.8
743
Tumor
-0.8
975
Tumor
-0.8
523
Tumor
-0.8
724
Normal
-0.8
635
Tumor
-0.8
277
Tumor
-0.8
685
Tumor
-0.8
663
Tumor
-0.8
883
Tumor
-0.8
963
Tumor
-0.8
695
Tumor
-0.8
641
Tumor
-0.8
965
Tumor
-0.9
921
Tumor
-0.9
671
Tumor
-0.9
777
Tumor
-0.9
877
Tumor
-0.9
365
Tumor
-0.9
647
Tumor
-0.9
1021
Tumor
-0.9
491
Tumor
-0.9
217
Tumor
-0.9
917
Tumor
-1.0
881
Tumor
-1.0
375
Tumor
-1.0
463
Tumor
-1.0
525
Tumor
-1.0
483
Tumor
-1.0
553
Tumor
-1.0
573
Tumor
-1.0
567
Tumor
-1.0
213
Tumor
-1.0
865
Tumor
-1.0
557
Tumor
-1.0
977
Tumor
-1.0
455
Tumor
-1.0
271
Tumor
-1.0
925
Tumor
-1.0
283
Tumor
-1.1
393
Tumor
-1.1
313
Tumor
-1.1
411
Tumor
-1.1
1031
Tumor
-1.1
497
Tumor
-1.1
937
Tumor
-1.2
131
Tumor
-1.2
487
Tumor
-1.2
227
Tumor
-1.3
395
Tumor
-1.3
951
Tumor
-1.3
385
Tumor
-1.4
473
Tumor
-1.4
863
Tumor
-1.4
661
Tumor
-1.4
221
Tumor
-1.6
311
Tumor
-1.6
211
Tumor
-1.7
425
Tumor
-1.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.