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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPINA6 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
316.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1369.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1219.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1093.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1045.1
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
971.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
961.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
953.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
925.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
864.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
862.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
844.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
836.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
830.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
805.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
792.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
785.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
777.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
738.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
736.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
733.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
733.1
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
724.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
719.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
712.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
712.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
693.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
674.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
667.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
652.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
652.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
645.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
633.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
625.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
614.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
612.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
600.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
597.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
591.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
572.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
565.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
565.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
563.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
559.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
555.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
553.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
551.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
550.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
548.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
544.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
541.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
538.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
532.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
529.7
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
528.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
528.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
525.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
520.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
519.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
515.9
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
511.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
511.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
509.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
506.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
506.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
495.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
490.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
490.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
488.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
485.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
480.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
478.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
477.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
473.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
473.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
468.5
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
468.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
464.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
463.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
457.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
454.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
453.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
453.2
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
452.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
451.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
451.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
450.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
449.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
444.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
440.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
440.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
438.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
435.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
431.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
430.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
427.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
427.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
426.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
424.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
421.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
420.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
418.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
417.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
411.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
404.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
402.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
400.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
394.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
393.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
392.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
390.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
388.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
386.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
385.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
379.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
379.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
376.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
375.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
375.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
375.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
372.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
368.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
368.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
367.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
367.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
364.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
363.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
363.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
360.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
359.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
353.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
352.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
350.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
350.7
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
345.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
344.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
344.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
344.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
343.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
343.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
340.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
339.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
335.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
335.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
332.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
331.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
329.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
328.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
325.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
325.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
324.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
324.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
322.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
321.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
320.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
317.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
316.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
312.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
312.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
308.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
307.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
305.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
305.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
304.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
303.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
301.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
294.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
292.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
292.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
292.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
292.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
290.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
289.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
285.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
281.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
280.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
279.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
279.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
278.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
276.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
276.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
274.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
274.5
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
274.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
272.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
272.3
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
270.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
269.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
268.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
268.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
266.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
265.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
265.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
262.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
258.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
257.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
256.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
256.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
254.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
254.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
253.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
250.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
248.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
247.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
242.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
242.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
241.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
241.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
241.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
240.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
238.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
237.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
236.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
236.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
235.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
233.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
230.8
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
229.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
226.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
226.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
224.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
222.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
220.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
217.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
215.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
214.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
213.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
211.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
210.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
205.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
204.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
203.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
201.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
199.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
198.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
197.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
195.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
195.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
194.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
192.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
192.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
192.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
192.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
190.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
189.1
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
187.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
186.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
185.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
184.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
182.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
181.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
177.3
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
176.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
175.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
175.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
174.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
172.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
171.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
170.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
168.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
161.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
160.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
159.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
159.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
159.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
159.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
158.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
158.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
158.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
152.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
152.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
151.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
150.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
148.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
144.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
142.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
141.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
141.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
141.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
139.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
138.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
135.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
134.5
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
130.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
129.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
129.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
127.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
127.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
127.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
125.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
121.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
121.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
118.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
116.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
115.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
114.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
113.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
113.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
110.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
110.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
106.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
106.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
104.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
103.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
101.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
101.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
99.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
96.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
95.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
94.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
92.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
91.7
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
91.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
90.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
90.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
89.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
88.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
88.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
87.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
82.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
81.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
80.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
80.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
79.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
79.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
79.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
79.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
78.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
74.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
72.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
70.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
69.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
66.7
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
64.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
63.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
63.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
63.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
59.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
58.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
58.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
58.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
54.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
53.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
50.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
48.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
44.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
40.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
38.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
37.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
37.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
35.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
30.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
29.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
20.9
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
20.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
4.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPINA6 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
268.0
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
973.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
870.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
834.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
819.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
799.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
797.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
726.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
706.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
675.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
664.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
659.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
629.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
628.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
619.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
616.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
608.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
596.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
588.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
585.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
581.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
578.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
563.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
558.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
550.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
544.3
DO45111
0 years, male, NA, stage:2, alive, 1590 days
535.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
533.4
DO45197
0 years, male, NA, stage:2, alive, 1170 days
527.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
519.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
514.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
514.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
513.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
502.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
498.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
494.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
491.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
467.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
467.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
454.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
441.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
437.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
435.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
418.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
414.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
406.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
396.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
394.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
393.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
389.1
DO45137
0 years, male, NA, stage:1, alive, 1320 days
384.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
372.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
362.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
358.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
356.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
351.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
350.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
349.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
346.8
DO50822
0 years, male, NA, stage:2, alive, 510 days
344.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
341.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
341.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
340.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
339.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
337.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
337.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
334.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
330.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
327.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
326.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
325.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
321.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
321.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
320.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
318.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
317.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
317.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
308.7
DO45095
0 years, male, NA, stage:2, alive, 1620 days
305.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
303.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
301.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
299.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
299.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
297.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
291.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
288.7
DO45113
0 years, male, NA, stage:3, alive, 1560 days
287.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
284.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
282.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
282.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
280.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
278.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
278.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
278.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
276.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
275.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
274.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
273.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
272.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
270.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
270.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
266.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
265.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
265.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
261.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
259.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
258.0
DO45215
0 years, male, NA, stage:2, alive, 1170 days
255.9
DO45203
0 years, female, NA, stage:2, alive, 1170 days
253.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
252.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
250.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
250.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
245.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
243.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
242.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
240.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
240.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
231.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
231.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
231.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
229.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
228.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
224.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
222.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
221.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
220.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
219.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
219.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
218.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
218.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
214.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
213.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
211.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
206.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
197.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
197.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
193.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
192.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
192.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
192.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
192.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
191.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
189.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
184.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
182.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
177.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
173.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
169.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
166.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
166.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
164.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
161.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
159.7
DO45127
0 years, male, NA, stage:3, dead, 420 days
159.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
157.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
151.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
150.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
150.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
146.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
144.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
143.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
140.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
138.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
137.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
135.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
134.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
131.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
129.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
125.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
125.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
123.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
123.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
120.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
119.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
118.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
118.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
116.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
115.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
112.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
110.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
105.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
103.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
103.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
102.3
DO48679
0 years, male, NA, stage:2, alive, 1200 days
101.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
100.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
98.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
98.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
96.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
96.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
95.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
92.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
90.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
88.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
88.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
87.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
85.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
84.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
81.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
80.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
80.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
79.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
78.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
78.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
75.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
72.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
70.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
68.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
67.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
65.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
65.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
60.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
49.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
47.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
42.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
41.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
37.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
35.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
27.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
20.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
15.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
4.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
4.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
1.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
0.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
343
Tumor
1.9
877
Tumor
1.8
863
Tumor
1.5
227
Tumor
1.4
671
Tumor
1.2
445
Tumor
1.0
713
Tumor
1.0
192
Normal
1.0
393
Tumor
0.9
777
Tumor
0.9
363
Tumor
0.9
697
Tumor
0.8
357
Tumor
0.8
224
Normal
0.8
967
Tumor
0.7
975
Tumor
0.7
953
Tumor
0.7
857
Tumor
0.7
785
Tumor
0.7
641
Tumor
0.6
471
Tumor
0.5
384
Normal
0.5
615
Tumor
0.5
425
Tumor
0.5
328
Normal
0.5
375
Tumor
0.5
444
Normal
0.5
618
Normal
0.5
924
Normal
0.5
1044
Normal
0.5
1022
Normal
0.5
884
Normal
0.5
1028
Normal
0.5
636
Normal
0.5
881
Tumor
0.4
695
Tumor
0.4
1045
Tumor
0.4
778
Normal
0.4
616
Normal
0.4
426
Normal
0.4
498
Normal
0.4
228
Normal
0.4
514
Normal
0.4
963
Tumor
0.4
283
Tumor
0.4
743
Tumor
0.3
344
Normal
0.3
983
Tumor
0.3
217
Tumor
0.3
672
Normal
0.3
391
Tumor
0.3
424
Normal
0.3
221
Tumor
0.3
665
Tumor
0.3
546
Normal
0.3
187
Tumor
0.3
364
Normal
0.3
746
Normal
0.3
513
Tumor
0.3
635
Tumor
0.3
1027
Tumor
0.3
642
Normal
0.3
563
Tumor
0.3
956
Normal
0.3
954
Normal
0.3
218
Normal
0.3
423
Tumor
0.3
722
Normal
0.3
1042
Normal
0.3
135
Tumor
0.3
488
Normal
0.3
368
Normal
0.3
365
Tumor
0.3
342
Normal
0.3
958
Normal
0.3
394
Normal
0.3
817
Tumor
0.3
271
Tumor
0.3
741
Tumor
0.3
142
Normal
0.3
648
Normal
0.3
354
Normal
0.2
964
Normal
0.2
568
Normal
0.2
627
Tumor
0.2
666
Normal
0.2
571
Tumor
0.2
284
Normal
0.2
196
Normal
0.2
982
Normal
0.2
428
Normal
0.2
414
Normal
0.2
137
Tumor
0.2
223
Tumor
0.2
865
Tumor
0.2
755
Tumor
0.2
286
Normal
0.2
314
Normal
0.2
564
Normal
0.2
195
Tumor
0.2
494
Normal
0.2
745
Tumor
0.2
376
Normal
0.2
422
Normal
0.2
212
Normal
0.2
433
Tumor
0.2
312
Normal
0.2
112
Tumor
0.2
261
Tumor
0.2
515
Tumor
0.2
851
Tumor
0.2
466
Normal
0.2
558
Normal
0.2
526
Normal
0.2
815
Tumor
0.2
392
Normal
0.1
1041
Tumor
0.1
866
Normal
0.1
553
Tumor
0.1
938
Normal
0.1
864
Normal
0.1
663
Tumor
0.1
313
Tumor
0.1
497
Tumor
0.1
484
Normal
0.1
818
Normal
0.1
873
Tumor
0.1
191
Tumor
0.1
481
Tumor
0.1
878
Normal
0.1
662
Normal
0.1
461
Tumor
0.1
868
Normal
0.1
353
Tumor
0.1
1043
Tumor
0.1
572
Normal
0.1
111
Normal
0.1
1046
Normal
0.1
686
Normal
0.1
386
Normal
0.1
715
Tumor
0.1
172
Normal
0.1
696
Normal
0.1
922
Normal
0.1
883
Tumor
0.1
874
Normal
0.1
388
Normal
0.1
916
Normal
0.1
966
Normal
0.1
824
Normal
0.1
557
Tumor
0.1
852
Normal
0.1
232
Normal
0.1
214
Normal
0.1
516
Normal
0.1
472
Normal
0.1
534
Normal
0.1
756
Normal
0.1
968
Normal
0.1
914
Normal
0.1
574
Normal
0.1
976
Normal
0.1
981
Tumor
0.1
664
Normal
0.1
162
Normal
0.1
917
Tumor
0.1
923
Tumor
0.1
146
Normal
0.1
858
Normal
0.1
462
Normal
0.1
463
Tumor
0.1
222
Normal
0.1
356
Normal
0.1
816
Normal
0.1
358
Normal
0.1
744
Normal
0.1
361
Tumor
0.1
487
Tumor
0.1
188
Normal
0.1
186
Normal
0.1
474
Normal
0.1
456
Normal
0.1
862
Normal
0.1
141
Tumor
0.0
1026
Normal
0.0
416
Normal
0.0
272
Normal
0.0
538
Normal
0.0
327
Tumor
0.0
148
Normal
0.0
138
Normal
0.0
455
Tumor
0.0
367
Tumor
0.0
468
Normal
0.0
478
Normal
0.0
126
Normal
0.0
396
Normal
0.0
432
Normal
0.0
114
Normal
0.0
491
Tumor
0.0
786
Normal
0.0
493
Tumor
0.0
944
Normal
0.0
132
Normal
0.0
517
Tumor
0.0
723
Tumor
0.0
918
Normal
0.0
448
Normal
0.0
446
Normal
0.0
297
Tumor
0.0
125
Tumor
0.0
1014
Normal
0.0
617
Tumor
0.0
352
Normal
0.0
728
Normal
0.0
268
Normal
0.0
464
Normal
0.0
262
Normal
0.0
492
Normal
0.0
716
Normal
0.0
535
Tumor
0.0
921
Tumor
0.0
311
Tumor
0.0
434
Normal
0.0
452
Normal
0.0
131
Tumor
0.0
362
Normal
0.0
813
Tumor
0.0
647
Tumor
0.0
447
Tumor
0.0
698
Normal
0.0
518
Normal
0.0
332
Normal
0.0
628
Normal
0.0
185
Tumor
0.0
536
Normal
0.0
742
Normal
0.0
528
Normal
0.0
1016
Normal
0.0
413
Tumor
0.0
341
Tumor
0.0
298
Normal
0.0
147
Tumor
0.0
278
Normal
-0.1
978
Normal
-0.1
984
Normal
-0.1
431
Tumor
-0.1
977
Tumor
-0.1
258
Normal
-0.1
136
Normal
-0.1
482
Normal
-0.1
523
Tumor
-0.1
113
Tumor
-0.1
525
Tumor
-0.1
1015
Tumor
-0.1
524
Normal
-0.1
366
Normal
-0.1
714
Normal
-0.1
882
Normal
-0.1
912
Normal
-0.1
913
Tumor
-0.1
465
Tumor
-0.1
267
Tumor
-0.1
823
Tumor
-0.1
952
Normal
-0.1
527
Tumor
-0.1
383
Tumor
-0.1
926
Normal
-0.1
483
Tumor
-0.1
1032
Normal
-0.1
355
Tumor
-0.1
573
Tumor
-0.2
145
Tumor
-0.2
955
Tumor
-0.2
124
Normal
-0.2
554
Normal
-0.2
721
Tumor
-0.2
814
Normal
-0.2
395
Tumor
-0.2
277
Tumor
-0.2
545
Tumor
-0.2
128
Normal
-0.2
436
Normal
-0.2
738
Normal
-0.2
285
Tumor
-0.2
421
Tumor
-0.2
443
Tumor
-0.2
412
Normal
-0.2
257
Tumor
-0.2
567
Tumor
-0.2
685
Tumor
-0.2
915
Tumor
-0.3
533
Tumor
-0.3
467
Tumor
-0.3
477
Tumor
-0.3
727
Tumor
-0.3
911
Tumor
-0.3
415
Tumor
-0.3
937
Tumor
-0.3
213
Tumor
-0.4
127
Tumor
-0.4
861
Tumor
-0.4
385
Tumor
-0.4
965
Tumor
-0.4
737
Tumor
-0.4
387
Tumor
-0.4
351
Tumor
-0.4
943
Tumor
-0.4
161
Tumor
-0.4
951
Tumor
-0.4
451
Tumor
-0.5
1021
Tumor
-0.5
867
Tumor
-0.5
957
Tumor
-0.5
411
Tumor
-0.5
661
Tumor
-0.5
427
Tumor
-0.5
435
Tumor
-0.5
724
Normal
-0.5
1013
Tumor
-0.5
1031
Tumor
-0.6
231
Tumor
-0.6
211
Tumor
-0.6
473
Tumor
-0.6
925
Tumor
-0.7
331
Tumor
-0.7
171
Tumor
-0.7
1025
Tumor
-0.7
537
Tumor
-0.8
123
Tumor
-1.0
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.