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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNTROB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
65.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
65.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
42.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
27.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
25.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
25.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
23.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
23.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
22.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
21.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
20.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
18.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
18.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
18.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
18.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
18.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
17.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
17.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
17.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
17.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
16.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
16.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
16.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
16.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
16.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
16.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
16.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
15.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
15.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
15.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
14.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
14.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
14.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
14.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
14.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
13.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
13.7
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
13.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
13.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
13.6
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
13.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
13.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
13.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
13.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
12.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
12.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.8
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
12.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
12.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
11.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
11.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
11.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
11.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
11.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
10.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
10.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
10.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
10.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
10.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
10.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
10.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
10.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
10.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.2
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
10.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
10.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
9.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
9.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
9.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
9.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
9.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
9.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
9.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
9.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
9.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
9.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
9.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
9.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
9.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
9.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
9.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
9.0
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
8.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
8.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
8.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
8.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
8.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
8.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
8.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.6
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
8.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
8.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
8.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
8.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
8.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
8.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
8.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
8.1
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
8.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
8.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
8.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
8.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
7.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
7.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
7.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
7.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
7.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
7.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
7.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
7.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
7.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
7.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
7.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
7.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
6.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
6.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
6.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
6.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
6.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
6.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
6.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
6.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
6.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
6.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
6.3
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
6.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
6.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
6.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
6.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
6.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
6.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
6.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
5.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
5.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
5.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
5.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
5.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
5.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
5.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
5.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
5.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
5.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
5.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
5.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
5.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
5.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
5.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
5.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
5.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
5.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
5.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
5.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
5.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
4.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
4.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
4.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
4.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
4.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
4.5
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
4.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
4.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
4.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.4
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
3.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.5
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
3.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
2.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
2.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNTROB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.1
Number of samples
231
Samples
Sample
Description
TPM
DO23521
0 years, male, NA, stage:3, alive, 1110 days
29.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
18.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
15.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
15.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
15.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
14.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
13.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
13.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
12.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
11.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
11.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
9.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
8.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
8.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
8.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
8.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
8.6
DO45297
0 years, female, NA, stage:4, dead, 1260 days
8.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
8.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
7.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
7.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
7.5
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
7.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
7.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
7.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
7.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
7.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
7.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
7.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
7.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
6.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.8
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
6.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
6.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.4
DO45275
0 years, male, NA, stage:3, dead, 10 days
6.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
6.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
5.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
5.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
5.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
5.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
5.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
5.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
5.4
DO23539
0 years, male, NA, stage:1, alive, 1110 days
5.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
5.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
5.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
5.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
5.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
5.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
5.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
5.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
5.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
5.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
4.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
4.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
4.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
4.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
4.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.8
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
4.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
4.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
4.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
4.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
4.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
4.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
4.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
4.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
4.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
4.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
4.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
4.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
4.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
4.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
4.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
4.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
4.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
4.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
4.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
4.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
4.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
4.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
3.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
3.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
3.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
3.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
3.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
3.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
3.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
3.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
3.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
3.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
3.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
3.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
3.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
3.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
3.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
3.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
3.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.3
DO50850
0 years, male, NA, stage:3, alive, 720 days
3.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
3.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
3.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
3.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
3.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
2.9
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
2.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
2.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
2.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
2.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
2.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
2.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
2.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
1.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
721
Tumor
0.6
964
Normal
0.6
874
Normal
0.5
858
Normal
0.5
146
Normal
0.5
383
Tumor
0.5
426
Normal
0.5
715
Tumor
0.5
672
Normal
0.5
912
Normal
0.5
1046
Normal
0.5
145
Tumor
0.5
956
Normal
0.5
391
Tumor
0.5
384
Normal
0.5
135
Tumor
0.5
472
Normal
0.5
484
Normal
0.5
428
Normal
0.5
432
Normal
0.5
1016
Normal
0.5
424
Normal
0.5
136
Normal
0.4
286
Normal
0.4
211
Tumor
0.4
636
Normal
0.4
425
Tumor
0.4
414
Normal
0.4
546
Normal
0.4
722
Normal
0.4
882
Normal
0.4
975
Tumor
0.4
456
Normal
0.4
482
Normal
0.4
268
Normal
0.4
464
Normal
0.4
915
Tumor
0.4
938
Normal
0.4
396
Normal
0.4
716
Normal
0.4
965
Tumor
0.4
444
Normal
0.4
413
Tumor
0.4
446
Normal
0.4
564
Normal
0.4
968
Normal
0.4
223
Tumor
0.4
926
Normal
0.4
666
Normal
0.4
742
Normal
0.4
422
Normal
0.3
958
Normal
0.3
723
Tumor
0.3
661
Tumor
0.3
917
Tumor
0.3
976
Normal
0.3
494
Normal
0.3
368
Normal
0.3
881
Tumor
0.3
452
Normal
0.3
922
Normal
0.3
671
Tumor
0.3
916
Normal
0.3
648
Normal
0.3
451
Tumor
0.3
536
Normal
0.3
366
Normal
0.3
1045
Tumor
0.3
572
Normal
0.3
462
Normal
0.3
686
Normal
0.3
554
Normal
0.3
954
Normal
0.3
921
Tumor
0.3
1044
Normal
0.3
878
Normal
0.3
388
Normal
0.3
478
Normal
0.3
467
Tumor
0.3
488
Normal
0.3
877
Tumor
0.3
142
Normal
0.3
738
Normal
0.3
925
Tumor
0.3
696
Normal
0.3
568
Normal
0.3
172
Normal
0.3
415
Tumor
0.3
434
Normal
0.3
132
Normal
0.3
698
Normal
0.3
285
Tumor
0.3
162
Normal
0.2
534
Normal
0.2
392
Normal
0.2
865
Tumor
0.2
567
Tumor
0.2
352
Normal
0.2
148
Normal
0.2
138
Normal
0.2
528
Normal
0.2
481
Tumor
0.2
474
Normal
0.2
538
Normal
0.2
362
Normal
0.2
364
Normal
0.2
884
Normal
0.2
412
Normal
0.2
714
Normal
0.2
271
Tumor
0.2
713
Tumor
0.2
697
Tumor
0.2
867
Tumor
0.2
937
Tumor
0.2
664
Normal
0.2
695
Tumor
0.2
913
Tumor
0.2
376
Normal
0.2
227
Tumor
0.2
662
Normal
0.2
448
Normal
0.2
436
Normal
0.2
918
Normal
0.2
228
Normal
0.2
466
Normal
0.2
914
Normal
0.2
272
Normal
0.2
818
Normal
0.2
944
Normal
0.2
728
Normal
0.2
498
Normal
0.2
557
Tumor
0.2
394
Normal
0.2
367
Tumor
0.2
642
Normal
0.1
943
Tumor
0.1
558
Normal
0.1
852
Normal
0.1
573
Tumor
0.1
386
Normal
0.1
447
Tumor
0.1
351
Tumor
0.1
816
Normal
0.1
423
Tumor
0.1
284
Normal
0.1
685
Tumor
0.1
186
Normal
0.1
461
Tumor
0.1
416
Normal
0.1
524
Normal
0.1
161
Tumor
0.1
635
Tumor
0.1
526
Normal
0.1
393
Tumor
0.1
563
Tumor
0.1
952
Normal
0.1
187
Tumor
0.1
328
Normal
0.1
356
Normal
0.1
212
Normal
0.1
628
Normal
0.1
966
Normal
0.1
857
Tumor
0.1
468
Normal
0.1
516
Normal
0.1
823
Tumor
0.1
574
Normal
0.1
984
Normal
0.1
327
Tumor
0.1
665
Tumor
0.1
455
Tumor
0.1
128
Normal
0.1
343
Tumor
0.0
618
Normal
0.0
421
Tumor
0.0
344
Normal
0.0
744
Normal
0.0
395
Tumor
0.0
258
Normal
0.0
111
Normal
0.0
431
Tumor
0.0
953
Tumor
0.0
131
Tumor
N/A
375
Tumor
0.0
866
Normal
0.0
617
Tumor
0.0
358
Normal
0.0
873
Tumor
0.0
262
Normal
0.0
616
Normal
0.0
361
Tumor
0.0
955
Tumor
0.0
342
Normal
0.0
868
Normal
0.0
463
Tumor
0.0
188
Normal
0.0
883
Tumor
0.0
1014
Normal
0.0
527
Tumor
0.0
492
Normal
0.0
963
Tumor
0.0
341
Tumor
0.0
911
Tumor
0.0
224
Normal
0.0
978
Normal
-0.1
433
Tumor
-0.1
231
Tumor
-0.1
824
Normal
-0.1
923
Tumor
-0.1
545
Tumor
-0.1
363
Tumor
-0.1
724
Normal
-0.1
737
Tumor
-0.1
627
Tumor
-0.1
354
Normal
-0.1
171
Tumor
-0.1
553
Tumor
-0.1
232
Normal
-0.1
137
Tumor
-0.1
951
Tumor
-0.1
124
Normal
-0.1
112
Tumor
-0.1
924
Normal
-0.1
851
Tumor
-0.1
141
Tumor
-0.1
862
Normal
-0.1
741
Tumor
-0.1
815
Tumor
-0.1
477
Tumor
-0.1
267
Tumor
-0.1
365
Tumor
-0.1
411
Tumor
-0.1
443
Tumor
-0.1
471
Tumor
-0.1
743
Tumor
-0.1
113
Tumor
-0.1
535
Tumor
-0.1
615
Tumor
-0.1
483
Tumor
-0.1
663
Tumor
-0.1
473
Tumor
-0.1
864
Normal
-0.1
353
Tumor
-0.1
127
Tumor
-0.1
518
Normal
-0.2
513
Tumor
-0.2
114
Normal
-0.2
387
Tumor
-0.2
465
Tumor
-0.2
355
Tumor
-0.2
514
Normal
-0.2
1043
Tumor
-0.2
977
Tumor
-0.2
125
Tumor
-0.2
957
Tumor
-0.2
435
Tumor
-0.2
525
Tumor
-0.2
185
Tumor
-0.2
283
Tumor
-0.2
982
Normal
-0.2
427
Tumor
-0.2
571
Tumor
-0.2
647
Tumor
-0.2
126
Normal
-0.2
491
Tumor
-0.2
261
Tumor
-0.3
727
Tumor
-0.3
445
Tumor
-0.3
641
Tumor
-0.3
257
Tumor
-0.3
967
Tumor
-0.3
147
Tumor
-0.3
537
Tumor
-0.3
487
Tumor
-0.3
515
Tumor
-0.3
493
Tumor
-0.3
517
Tumor
-0.4
983
Tumor
-0.4
1015
Tumor
-0.4
1013
Tumor
-0.4
817
Tumor
-0.4
523
Tumor
-0.4
981
Tumor
-0.4
385
Tumor
-0.5
861
Tumor
-0.5
123
Tumor
-0.5
357
Tumor
-0.6
497
Tumor
-0.6
533
Tumor
-0.8
863
Tumor
-0.9
813
Tumor
N/A
814
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
277
Tumor
N/A
278
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
297
Tumor
N/A
298
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
755
Tumor
N/A
756
Normal
N/A
777
Tumor
N/A
778
Normal
N/A
785
Tumor
N/A
786
Normal
N/A
311
Tumor
N/A
312
Normal
N/A
313
Tumor
N/A
314
Normal
N/A
331
Tumor
N/A
332
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
