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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF768 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
134.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
99.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
67.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
59.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
57.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
54.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
51.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
50.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
48.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
47.5
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
47.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
47.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
46.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
46.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
46.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
46.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
46.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
45.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
45.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
45.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
43.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
42.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
40.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
39.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
39.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
39.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
39.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
39.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
38.7
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
38.4
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
38.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
38.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
37.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
37.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
37.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
37.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
37.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
36.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
36.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
36.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
35.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
35.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
35.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
35.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
35.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
34.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
34.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
33.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
33.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
33.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
33.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
33.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
33.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
32.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
32.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
32.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
32.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
32.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
31.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
31.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
31.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
31.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
31.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
31.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
31.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
31.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
30.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
30.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
30.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
30.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
30.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
30.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
29.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
29.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
29.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
29.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
29.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
29.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
29.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
28.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
28.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
28.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
28.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
28.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
27.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
27.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
27.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
27.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
27.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
27.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
27.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
27.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
27.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
27.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
27.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
26.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
26.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
26.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
26.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
26.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
26.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
26.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
26.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
26.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
25.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
25.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
25.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
25.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
25.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
25.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
25.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
24.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
24.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
24.8
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
24.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
24.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
24.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
24.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
24.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
24.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
24.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
23.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
23.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
23.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
23.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
23.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
23.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
23.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
23.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
23.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
23.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
23.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
22.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
22.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
22.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
22.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
22.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
22.2
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
22.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
21.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
21.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
21.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
21.7
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
21.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
21.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
21.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
21.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
21.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
21.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
21.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
20.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
20.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
20.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
20.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
20.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
20.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
20.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
20.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.4
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
20.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
20.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
20.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
20.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
19.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
19.6
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
19.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
19.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
19.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
19.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
19.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
19.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
19.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
19.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
19.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
18.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
18.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
18.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
18.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.8
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
18.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
18.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
18.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
18.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
17.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
17.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
17.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
17.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
17.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
17.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
17.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
17.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
17.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
17.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
17.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
17.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
17.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
17.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
17.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
17.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
16.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
16.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
16.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
16.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
16.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
16.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
16.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
16.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
16.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
16.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
16.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
16.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
16.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
15.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
15.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
15.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
15.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
15.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
14.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
14.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
14.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
14.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
14.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
14.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
14.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
14.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
14.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
14.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
13.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
13.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.8
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
13.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
13.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
13.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
13.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
12.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
12.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
12.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
12.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
12.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
12.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
12.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
12.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
11.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
11.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
11.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
11.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
11.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
11.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
11.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
10.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
10.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.5
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
10.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
9.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
9.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
9.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
9.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
8.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
7.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
7.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
7.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
7.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
6.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZNF768 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
63.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
59.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
52.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
51.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
47.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
41.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
41.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
39.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
38.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
37.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
36.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
36.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
32.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
31.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
30.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
30.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
29.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
29.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
29.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
29.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
27.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
27.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
27.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
26.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
26.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
26.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
26.5
DO45127
0 years, male, NA, stage:3, dead, 420 days
26.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
25.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
24.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
24.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
24.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
23.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
23.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
23.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
23.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
23.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
22.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
22.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
22.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
22.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
22.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
21.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
21.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
21.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
21.3
DO50839
0 years, female, NA, stage:3, alive, 330 days
21.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
21.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
21.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
21.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
20.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
20.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
20.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
20.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
20.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
20.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
20.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
19.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
19.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
19.7
DO23533
0 years, male, NA, stage:2, alive, 900 days
19.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
19.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
19.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
19.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
18.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
18.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
18.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
18.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
18.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
18.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
17.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
17.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
17.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
17.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
17.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
16.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
16.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
16.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
16.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
15.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
15.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
15.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
15.4
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
15.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.3
DO45307
0 years, female, NA, stage:4, dead, 240 days
15.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
15.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
15.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
14.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
14.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
14.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
14.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
13.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
13.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
13.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
12.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
12.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
12.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
12.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
12.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
11.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
11.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
11.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
11.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
11.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
11.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
11.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
11.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
11.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
11.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.9
DO23536
0 years, male, NA, stage:2, alive, 930 days
10.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
10.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
10.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
10.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
10.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
10.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
10.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
10.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
10.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
9.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
9.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
9.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
9.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
9.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
9.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
9.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
8.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
8.8
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
8.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
8.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
8.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
8.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
8.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
7.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
7.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
7.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
6.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
3.3
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
917
Tumor
2.6
413
Tumor
1.8
956
Normal
1.1
967
Tumor
1.0
411
Tumor
0.9
423
Tumor
0.9
743
Tumor
0.8
952
Normal
0.8
514
Normal
0.8
938
Normal
0.7
385
Tumor
0.7
661
Tumor
0.7
944
Normal
0.7
537
Tumor
0.7
535
Tumor
0.7
954
Normal
0.7
427
Tumor
0.6
635
Tumor
0.6
331
Tumor
0.6
526
Normal
0.6
817
Tumor
0.6
473
Tumor
0.6
444
Normal
0.6
524
Normal
0.6
943
Tumor
0.6
523
Tumor
0.6
188
Normal
0.6
513
Tumor
0.6
571
Tumor
0.5
641
Tumor
0.5
146
Normal
0.5
391
Tumor
0.5
387
Tumor
0.5
627
Tumor
0.5
268
Normal
0.5
1043
Tumor
0.5
1045
Tumor
0.5
616
Normal
0.5
713
Tumor
0.5
636
Normal
0.5
123
Tumor
0.5
477
Tumor
0.5
497
Tumor
0.5
516
Normal
0.5
1026
Normal
0.5
487
Tumor
0.5
488
Normal
0.5
412
Normal
0.4
744
Normal
0.4
478
Normal
0.4
545
Tumor
0.4
357
Tumor
0.4
192
Normal
0.4
727
Tumor
0.4
313
Tumor
0.4
452
Normal
0.4
1027
Tumor
0.4
533
Tumor
0.4
574
Normal
0.4
558
Normal
0.4
518
Normal
0.4
615
Tumor
0.4
628
Normal
0.4
484
Normal
0.4
916
Normal
0.4
415
Tumor
0.4
272
Normal
0.4
277
Tumor
0.3
355
Tumor
0.3
1032
Normal
0.3
695
Tumor
0.3
465
Tumor
0.3
722
Normal
0.3
686
Normal
0.3
435
Tumor
0.3
162
Normal
0.3
343
Tumor
0.3
388
Normal
0.3
446
Normal
0.3
814
Normal
0.3
536
Normal
0.3
426
Normal
0.3
267
Tumor
0.3
873
Tumor
0.3
1025
Tumor
0.3
568
Normal
0.3
567
Tumor
0.3
332
Normal
0.3
618
Normal
0.3
436
Normal
0.3
564
Normal
0.3
813
Tumor
0.3
141
Tumor
0.3
863
Tumor
0.3
1022
Normal
0.3
818
Normal
0.3
617
Tumor
0.3
671
Tumor
0.3
923
Tumor
0.3
498
Normal
0.3
142
Normal
0.3
138
Normal
0.2
186
Normal
0.2
232
Normal
0.2
432
Normal
0.2
912
Normal
0.2
1041
Tumor
0.2
394
Normal
0.2
964
Normal
0.2
1028
Normal
0.2
468
Normal
0.2
527
Tumor
0.2
297
Tumor
0.2
862
Normal
0.2
393
Tumor
0.2
858
Normal
0.2
963
Tumor
0.2
914
Normal
0.2
298
Normal
0.2
642
Normal
0.2
474
Normal
0.2
132
Normal
0.2
464
Normal
0.2
874
Normal
0.2
786
Normal
0.2
342
Normal
0.2
975
Tumor
0.2
131
Tumor
0.2
481
Tumor
0.2
262
Normal
0.2
698
Normal
0.2
968
Normal
0.2
778
Normal
0.2
866
Normal
0.2
472
Normal
0.2
386
Normal
0.2
976
Normal
0.2
882
Normal
0.2
824
Normal
0.2
328
Normal
0.2
921
Tumor
0.2
314
Normal
0.2
966
Normal
0.2
356
Normal
0.2
716
Normal
0.2
231
Tumor
0.2
451
Tumor
0.1
528
Normal
0.1
864
Normal
0.1
258
Normal
0.1
461
Tumor
0.1
148
Normal
0.1
878
Normal
0.1
433
Tumor
0.1
196
Normal
0.1
271
Tumor
0.1
471
Tumor
0.1
538
Normal
0.1
572
Normal
0.1
756
Normal
0.1
857
Tumor
0.1
416
Normal
0.1
482
Normal
0.1
865
Tumor
0.1
447
Tumor
0.1
958
Normal
0.1
327
Tumor
0.1
456
Normal
0.1
467
Tumor
0.1
428
Normal
0.1
434
Normal
0.1
217
Tumor
0.1
396
Normal
0.1
1044
Normal
0.1
911
Tumor
0.1
697
Tumor
0.1
494
Normal
0.1
462
Normal
0.1
1021
Tumor
0.1
136
Normal
0.1
455
Tumor
0.1
563
Tumor
0.1
877
Tumor
0.1
738
Normal
0.0
466
Normal
0.0
647
Tumor
0.0
422
Normal
0.0
737
Tumor
0.0
1042
Normal
0.0
147
Tumor
0.0
395
Tumor
0.0
312
Normal
0.0
185
Tumor
0.0
881
Tumor
0.0
851
Tumor
0.0
777
Tumor
0.0
955
Tumor
0.0
352
Normal
0.0
311
Tumor
0.0
218
Normal
0.0
492
Normal
0.0
714
Normal
0.0
392
Normal
0.0
957
Tumor
0.0
664
Normal
0.0
926
Normal
0.0
666
Normal
0.0
534
Normal
0.0
573
Tumor
0.0
431
Tumor
0.0
884
Normal
0.0
816
Normal
0.0
515
Tumor
0.0
663
Tumor
0.0
525
Tumor
0.0
883
Tumor
0.0
785
Tumor
0.0
221
Tumor
0.0
145
Tumor
0.0
868
Normal
0.0
913
Tumor
0.0
1031
Tumor
0.0
546
Normal
0.0
685
Tumor
0.0
553
Tumor
0.0
137
Tumor
0.0
222
Normal
-0.1
172
Normal
-0.1
665
Tumor
-0.1
728
Normal
-0.1
741
Tumor
-0.1
448
Normal
-0.1
161
Tumor
-0.1
443
Tumor
-0.1
721
Tumor
-0.1
696
Normal
-0.1
135
Tumor
-0.1
742
Normal
-0.1
463
Tumor
-0.1
965
Tumor
-0.1
278
Normal
-0.1
424
Normal
-0.1
1046
Normal
-0.1
852
Normal
-0.1
214
Normal
-0.1
261
Tumor
-0.1
195
Tumor
-0.1
924
Normal
-0.1
953
Tumor
-0.1
124
Normal
-0.1
445
Tumor
-0.1
113
Tumor
-0.1
662
Normal
-0.1
867
Tumor
-0.2
187
Tumor
-0.2
723
Tumor
-0.2
358
Normal
-0.2
746
Normal
-0.2
715
Tumor
-0.2
191
Tumor
-0.2
648
Normal
-0.2
815
Tumor
-0.2
493
Tumor
-0.2
363
Tumor
-0.2
491
Tumor
-0.2
483
Tumor
-0.2
861
Tumor
-0.2
364
Normal
-0.2
918
Normal
-0.2
425
Tumor
-0.2
672
Normal
-0.2
745
Tumor
-0.3
341
Tumor
-0.3
344
Normal
-0.3
922
Normal
-0.3
351
Tumor
-0.3
128
Normal
-0.3
554
Normal
-0.3
724
Normal
-0.3
354
Normal
-0.3
517
Tumor
-0.3
353
Tumor
-0.3
126
Normal
-0.4
557
Tumor
-0.4
257
Tumor
-0.4
114
Normal
-0.4
171
Tumor
-0.5
755
Tumor
-0.5
951
Tumor
-0.5
213
Tumor
-0.5
127
Tumor
-0.5
915
Tumor
-0.5
925
Tumor
-0.6
111
Normal
-0.6
823
Tumor
-0.6
937
Tumor
-0.6
125
Tumor
-0.7
112
Tumor
-0.8
421
Tumor
-1.0
361
Tumor
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
383
Tumor
N/A
384
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
977
Tumor
N/A
978
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
983
Tumor
N/A
984
Normal
N/A
414
Normal
N/A
211
Tumor
N/A
212
Normal
N/A
223
Tumor
N/A
224
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
