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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GUSB is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
289.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
233.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
225.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
207.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
202.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
197.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
189.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
182.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
168.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
164.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
161.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
160.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
159.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
158.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
153.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
151.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
150.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
150.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
147.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
147.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
146.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
142.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
141.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
139.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
138.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
131.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
130.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
129.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
128.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
125.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
124.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
124.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
123.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
122.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
120.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
120.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
119.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
118.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
117.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
116.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
116.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
115.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
115.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
113.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
113.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
113.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
113.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
112.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
112.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
111.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
111.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
110.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
109.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
108.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
108.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
107.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
107.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
106.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
105.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
104.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
103.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
101.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
100.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
100.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
99.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
99.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
98.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
98.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
97.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
97.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
95.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
94.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
94.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
93.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
93.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
93.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
93.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
92.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
92.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
92.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
92.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
91.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
91.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
90.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
89.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
88.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
88.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
88.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
88.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
87.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
87.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
87.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
87.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
86.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
86.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
85.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
85.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
84.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
84.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
84.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
83.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
83.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
83.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
83.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
83.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
82.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
82.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
82.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
82.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
81.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
81.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
81.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
81.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
81.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
80.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
80.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
80.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
80.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
79.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
79.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
79.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
79.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
78.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
78.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
78.6
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
78.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
78.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
78.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
78.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
78.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
77.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
77.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
77.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
77.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
76.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
76.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
76.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
75.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
74.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
74.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
73.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
73.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
73.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
72.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
72.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
72.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
72.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
72.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
71.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
71.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
70.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
70.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
70.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
70.3
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
70.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
70.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
69.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
69.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
69.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
69.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
69.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
68.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
67.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
67.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
67.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
67.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
66.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
66.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
66.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
65.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
65.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
64.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
64.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
64.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
64.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
64.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
64.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
64.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
64.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
64.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
64.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
63.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
63.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
63.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
63.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
63.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
63.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
63.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
62.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
62.6
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
62.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
62.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
62.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
62.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
62.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
62.1
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
61.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
61.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
61.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
61.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
60.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
60.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
60.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
60.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
60.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
60.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
59.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
59.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
59.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
59.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
59.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
59.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
59.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
59.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
58.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
58.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
58.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
58.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
58.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
58.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
58.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
57.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
57.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
57.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
57.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
57.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
56.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
56.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
56.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
56.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
55.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
55.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
55.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
55.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
54.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
54.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
54.3
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
54.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
54.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
54.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
54.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
53.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
53.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
53.5
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
53.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
53.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
53.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
52.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
52.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
52.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
52.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
52.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
52.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
51.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
51.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
51.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
50.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
50.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
49.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
49.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
49.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
48.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
48.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
48.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
48.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
47.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
47.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
47.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
47.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
46.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
46.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
45.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
45.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
45.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
45.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
44.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
44.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
44.5
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
44.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
44.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
43.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
43.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
43.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
43.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
43.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
42.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
42.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
42.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
42.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
42.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
42.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
41.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
41.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
40.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
40.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
40.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
40.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
40.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
40.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
39.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
39.3
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
39.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
39.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
38.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
38.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
38.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
38.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
38.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
38.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
38.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
37.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
37.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
37.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
37.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
37.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
36.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
36.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
36.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
36.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
36.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
35.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
35.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
35.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
34.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
34.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
34.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
34.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
34.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
33.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
33.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
33.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
32.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
32.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
32.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
32.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
32.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
31.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
31.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
29.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
29.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
29.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
28.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
28.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
28.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
28.3
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
27.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
25.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
25.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
25.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
25.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
25.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
25.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
24.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
23.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
22.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
22.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
22.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
20.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
14.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GUSB is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.1
Number of samples
231
Samples
Sample
Description
TPM
DO23537
0 years, male, NA, stage:2, dead, 900 days
171.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
162.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
155.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
151.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
142.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
138.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
137.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
133.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
130.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
128.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
124.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
123.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
121.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
120.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
119.3
DO23524
0 years, female, NA, stage:2, alive, 1050 days
118.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
109.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
108.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
108.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
106.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
106.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
105.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
104.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
101.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
101.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
99.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
97.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
97.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
95.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
95.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
92.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
91.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
91.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
90.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
90.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
90.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
89.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
88.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
87.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
87.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
87.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
87.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
86.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
86.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
86.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
86.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
85.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
84.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
84.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
84.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
83.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
83.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
83.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
83.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
82.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
81.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
80.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
80.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
80.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
79.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
78.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
78.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
78.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
77.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
77.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
77.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
76.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
76.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
76.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
76.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
75.8
DO48741
0 years, male, NA, stage:3, alive, 240 days
75.7
DO45183
0 years, female, NA, stage:2, dead, 570 days
75.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
74.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
72.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
72.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
71.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
70.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
70.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
70.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
69.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
69.8
DO48725
0 years, male, NA, stage:1, alive, 780 days
69.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
68.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
68.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
68.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
68.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
68.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
68.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
68.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
67.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
67.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
67.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
67.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
66.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
66.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
66.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
66.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
65.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
65.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
65.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
65.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
65.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
64.9
DO23516
0 years, male, NA, stage:3, dead, 20 days
64.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
64.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
64.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
64.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
64.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
63.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
63.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
62.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
62.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
62.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
62.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
62.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
62.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
61.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
61.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
60.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
60.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
60.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
59.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
59.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
59.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
59.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
59.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
58.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
58.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
58.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
57.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
57.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
57.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
57.6
DO50806
0 years, male, NA, stage:4, alive, 540 days
55.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
55.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
55.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
55.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
55.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
54.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
54.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
54.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
54.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
53.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
53.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
53.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
53.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
53.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
53.3
DO23542
0 years, male, NA, stage:3, alive, 960 days
53.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
53.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
52.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
52.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
51.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
51.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
50.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
50.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
50.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
50.6
DO45189
0 years, female, NA, stage:2, alive, 1200 days
50.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
50.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
50.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
49.9
DO45281
0 years, male, NA, stage:4, alive, 750 days
49.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
48.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
47.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
47.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
47.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
47.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
47.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
47.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
47.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
46.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
45.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
45.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
45.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
45.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
44.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
44.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
44.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
44.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
43.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
43.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
42.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
42.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
42.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
42.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
41.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
41.9
DO45115
0 years, male, NA, stage:2, alive, 840 days
41.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
41.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
41.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
41.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
40.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
40.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
40.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
39.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
39.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
38.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
37.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
37.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
37.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
37.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
36.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
36.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
35.9
DO45179
0 years, female, NA, stage:2, alive, 600 days
35.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
35.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
34.9
DO23549
0 years, male, NA, stage:3, alive, 990 days
34.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
34.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
34.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
33.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
33.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
33.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
31.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
31.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
29.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
28.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
28.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
28.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
27.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
27.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
27.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
27.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
26.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
25.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
19.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
18.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
137
Tumor
1.2
641
Tumor
1.1
921
Tumor
1.0
695
Tumor
0.9
394
Normal
0.8
953
Tumor
0.8
125
Tumor
0.8
231
Tumor
0.7
443
Tumor
0.7
864
Normal
0.7
445
Tumor
0.7
744
Normal
0.6
342
Normal
0.6
222
Normal
0.6
648
Normal
0.6
564
Normal
0.6
742
Normal
0.6
462
Normal
0.6
618
Normal
0.6
132
Normal
0.6
353
Tumor
0.6
425
Tumor
0.6
136
Normal
0.6
148
Normal
0.5
572
Normal
0.5
356
Normal
0.5
452
Normal
0.5
464
Normal
0.5
568
Normal
0.5
477
Tumor
0.5
664
Normal
0.5
426
Normal
0.5
471
Tumor
0.5
955
Tumor
0.5
221
Tumor
0.5
411
Tumor
0.5
128
Normal
0.5
277
Tumor
0.5
186
Normal
0.5
341
Tumor
0.4
881
Tumor
0.4
912
Normal
0.4
162
Normal
0.4
672
Normal
0.4
358
Normal
0.4
526
Normal
0.4
466
Normal
0.4
635
Tumor
0.4
911
Tumor
0.4
727
Tumor
0.4
278
Normal
0.4
344
Normal
0.4
414
Normal
0.4
261
Tumor
0.4
392
Normal
0.4
728
Normal
0.4
343
Tumor
0.4
436
Normal
0.4
686
Normal
0.4
636
Normal
0.4
171
Tumor
0.4
878
Normal
0.4
196
Normal
0.4
424
Normal
0.3
314
Normal
0.3
663
Tumor
0.3
114
Normal
0.3
474
Normal
0.3
738
Normal
0.3
423
Tumor
0.3
662
Normal
0.3
388
Normal
0.3
127
Tumor
0.3
617
Tumor
0.3
755
Tumor
0.3
172
Normal
0.3
147
Tumor
0.3
111
Normal
0.3
983
Tumor
0.3
1016
Normal
0.3
616
Normal
0.3
818
Normal
0.3
352
Normal
0.3
862
Normal
0.3
482
Normal
0.3
268
Normal
0.3
824
Normal
0.3
715
Tumor
0.3
918
Normal
0.3
387
Tumor
0.3
723
Tumor
0.3
571
Tumor
0.3
258
Normal
0.3
756
Normal
0.3
354
Normal
0.3
558
Normal
0.2
422
Normal
0.2
922
Normal
0.2
446
Normal
0.2
312
Normal
0.2
938
Normal
0.2
1014
Normal
0.2
141
Tumor
0.2
642
Normal
0.2
975
Tumor
0.2
1022
Normal
0.2
484
Normal
0.2
497
Tumor
0.2
615
Tumor
0.2
714
Normal
0.2
746
Normal
0.2
786
Normal
0.2
494
Normal
0.2
1041
Tumor
0.2
272
Normal
0.2
142
Normal
0.2
563
Tumor
0.2
778
Normal
0.2
868
Normal
0.2
515
Tumor
0.2
435
Tumor
0.2
882
Normal
0.2
472
Normal
0.2
866
Normal
0.2
574
Normal
0.2
852
Normal
0.2
232
Normal
0.2
1021
Tumor
0.2
428
Normal
0.2
628
Normal
0.2
434
Normal
0.2
376
Normal
0.1
313
Tumor
0.1
984
Normal
0.1
363
Tumor
0.1
785
Tumor
0.1
396
Normal
0.1
968
Normal
0.1
944
Normal
0.1
138
Normal
0.1
126
Normal
0.1
432
Normal
0.1
332
Normal
0.1
527
Tumor
0.1
357
Tumor
0.1
1028
Normal
0.1
433
Tumor
0.1
553
Tumor
0.1
161
Tumor
0.1
468
Normal
0.1
214
Normal
0.1
647
Tumor
0.1
188
Normal
0.1
298
Normal
0.1
361
Tumor
0.1
874
Normal
0.1
146
Normal
0.1
977
Tumor
0.1
386
Normal
0.1
528
Normal
0.1
722
Normal
0.1
514
Normal
0.1
976
Normal
0.1
1032
Normal
0.1
538
Normal
0.1
412
Normal
0.1
666
Normal
0.1
534
Normal
0.1
368
Normal
0.0
286
Normal
0.0
455
Tumor
0.0
546
Normal
0.0
916
Normal
0.0
858
Normal
0.0
698
Normal
0.0
1043
Tumor
0.0
212
Normal
0.0
716
Normal
0.0
816
Normal
0.0
456
Normal
0.0
228
Normal
0.0
488
Normal
0.0
924
Normal
0.0
362
Normal
0.0
124
Normal
0.0
431
Tumor
0.0
481
Tumor
0.0
721
Tumor
0.0
954
Normal
0.0
328
Normal
0.0
465
Tumor
0.0
195
Tumor
0.0
518
Normal
0.0
926
Normal
0.0
262
Normal
0.0
685
Tumor
-0.1
218
Normal
-0.1
351
Tumor
-0.1
696
Normal
-0.1
355
Tumor
-0.1
284
Normal
-0.1
952
Normal
-0.1
958
Normal
-0.1
416
Normal
-0.1
956
Normal
-0.1
135
Tumor
-0.1
491
Tumor
-0.1
395
Tumor
-0.1
1042
Normal
-0.1
1026
Normal
-0.1
957
Tumor
-0.1
421
Tumor
-0.1
444
Normal
-0.1
1046
Normal
-0.1
271
Tumor
-0.1
227
Tumor
-0.1
1013
Tumor
-0.1
523
Tumor
-0.1
192
Normal
-0.1
883
Tumor
-0.1
1045
Tumor
-0.1
737
Tumor
-0.2
185
Tumor
-0.2
884
Normal
-0.2
966
Normal
-0.2
857
Tumor
-0.2
554
Normal
-0.2
713
Tumor
-0.2
982
Normal
-0.2
267
Tumor
-0.2
915
Tumor
-0.2
364
Normal
-0.2
813
Tumor
-0.2
448
Normal
-0.2
516
Normal
-0.2
913
Tumor
-0.2
627
Tumor
-0.2
914
Normal
-0.2
978
Normal
-0.2
1044
Normal
-0.2
461
Tumor
-0.2
384
Normal
-0.3
366
Normal
-0.3
478
Normal
-0.3
393
Tumor
-0.3
661
Tumor
-0.3
257
Tumor
-0.3
145
Tumor
-0.3
224
Normal
-0.3
863
Tumor
-0.3
817
Tumor
-0.3
427
Tumor
-0.3
492
Normal
-0.3
1031
Tumor
-0.4
383
Tumor
-0.4
697
Tumor
-0.4
413
Tumor
-0.4
493
Tumor
-0.4
223
Tumor
-0.4
375
Tumor
-0.4
665
Tumor
-0.4
867
Tumor
-0.4
463
Tumor
-0.4
1027
Tumor
-0.4
951
Tumor
-0.4
283
Tumor
-0.4
671
Tumor
-0.4
923
Tumor
-0.4
467
Tumor
-0.4
498
Normal
-0.4
217
Tumor
-0.5
385
Tumor
-0.5
917
Tumor
-0.5
815
Tumor
-0.5
524
Normal
-0.5
814
Normal
-0.5
191
Tumor
-0.5
937
Tumor
-0.5
311
Tumor
-0.5
536
Normal
-0.5
297
Tumor
-0.5
557
Tumor
-0.5
211
Tumor
-0.5
483
Tumor
-0.5
873
Tumor
-0.5
851
Tumor
-0.5
487
Tumor
-0.6
877
Tumor
-0.6
365
Tumor
-0.6
1015
Tumor
-0.6
391
Tumor
-0.6
865
Tumor
-0.6
367
Tumor
-0.6
823
Tumor
-0.6
415
Tumor
-0.6
964
Normal
-0.6
213
Tumor
-0.7
112
Tumor
-0.7
967
Tumor
-0.7
777
Tumor
-0.7
525
Tumor
-0.7
285
Tumor
-0.7
447
Tumor
-0.7
513
Tumor
-0.7
545
Tumor
-0.7
131
Tumor
-0.7
517
Tumor
-0.8
187
Tumor
-0.8
327
Tumor
-0.8
533
Tumor
-0.8
331
Tumor
-0.8
473
Tumor
-0.8
743
Tumor
-0.8
113
Tumor
-0.8
943
Tumor
-0.8
861
Tumor
-0.8
123
Tumor
-0.9
573
Tumor
-0.9
451
Tumor
-0.9
981
Tumor
-0.9
535
Tumor
-0.9
741
Tumor
-1.0
567
Tumor
-1.0
965
Tumor
-1.1
724
Normal
-1.1
537
Tumor
-1.2
925
Tumor
-1.2
745
Tumor
-1.2
1025
Tumor
-1.3
963
Tumor
-1.4
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
