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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOR1AIP2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
92.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
76.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
75.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
68.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
66.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
64.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
60.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
58.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
58.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
58.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
57.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
56.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
55.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
53.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
53.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
52.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
51.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
50.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
49.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
48.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
48.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
47.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
47.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
46.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
44.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
43.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
42.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
42.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
41.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
41.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
40.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
40.0
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
39.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
38.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
38.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
37.9
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
37.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
37.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
37.3
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
36.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
36.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
36.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
36.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
36.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
35.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
35.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
35.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
34.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
33.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
33.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
33.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
33.2
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
33.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
32.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
32.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
32.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
32.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
32.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
32.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
32.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
31.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
31.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
31.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
31.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
31.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
31.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
30.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
30.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
30.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
30.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
30.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
29.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
29.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
29.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
29.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
29.2
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
28.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
28.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
28.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
28.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
28.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
27.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
27.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
27.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
27.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
27.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
27.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
26.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
26.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
26.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
25.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
25.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
25.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
25.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
25.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
25.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
25.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
25.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
24.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
24.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
24.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
24.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
24.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
24.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
24.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
24.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
24.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
24.4
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
24.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
24.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
24.1
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
24.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
23.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
23.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
23.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
23.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
23.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
23.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
22.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
22.6
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
22.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
22.2
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
22.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
21.8
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
21.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
21.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
21.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
21.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
21.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
21.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.0
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
20.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
20.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
20.7
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
20.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
20.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
20.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
20.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
20.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
20.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
20.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
20.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
19.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
19.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
19.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
19.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
19.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
19.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
19.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
19.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
18.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
18.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
18.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
18.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
18.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
18.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
18.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
18.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
18.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
18.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
17.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
17.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
17.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
17.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
17.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
17.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
17.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
17.4
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
17.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
16.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
16.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
16.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
16.7
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
16.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
16.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
16.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
16.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
16.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
16.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
16.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
16.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
16.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
16.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
16.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.1
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
16.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
15.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
15.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
15.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.6
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
15.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
15.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
15.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
15.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
14.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.8
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
14.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.7
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
14.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.3
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
14.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
14.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
14.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
14.2
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
14.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
14.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
14.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
14.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
13.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
13.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
13.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
13.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
13.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
13.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
13.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
13.2
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
13.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
13.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
13.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
12.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.8
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
12.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
12.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
12.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
12.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.3
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
12.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
12.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
12.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
12.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
12.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
12.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
11.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
11.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
11.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
11.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
11.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
11.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
11.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
10.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
10.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
9.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
9.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
9.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
9.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
9.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
9.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
9.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
9.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
9.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
8.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
8.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
8.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
8.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.9
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
7.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
7.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
7.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
6.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
5.9
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TOR1AIP2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.1
Number of samples
231
Samples
Sample
Description
TPM
DO48746
0 years, male, NA, stage:3, alive, 570 days
55.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
52.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
50.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
38.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
34.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
33.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
30.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
30.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
29.1
DO48695
0 years, male, NA, stage:2, alive, 720 days
27.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
27.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
27.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
26.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
26.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
25.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
25.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
24.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
24.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
23.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
22.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
21.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
21.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
21.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
20.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
18.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
18.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
18.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
18.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
18.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
17.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
17.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
16.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
16.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
16.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
15.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
15.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
15.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
15.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
14.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
14.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
13.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
13.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
13.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
13.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
13.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
13.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
13.0
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
12.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
11.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
11.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
11.0
DO45103
0 years, male, NA, stage:3, alive, 450 days
10.9
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
10.8
DO23508
0 years, female, NA, stage:2, alive, 390 days
10.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
10.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
10.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
10.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
10.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
10.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
10.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
10.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.1
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.9
DO48697
0 years, female, NA, stage:2, dead, 810 days
9.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
9.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
9.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
9.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
9.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
9.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
9.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
8.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
8.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
8.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
8.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
8.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
7.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
7.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
7.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
7.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
7.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
7.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
7.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
7.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
7.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
7.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.2
DO23518
0 years, male, NA, stage:2, alive, 1320 days
7.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
6.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
6.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
6.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
6.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
6.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
6.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
6.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
6.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
6.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
6.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
6.2
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
5.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
5.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
5.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
5.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
5.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.0
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
4.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
4.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
3.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
3.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
3.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
3.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
3.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
2.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
451
Tumor
0.9
227
Tumor
0.9
977
Tumor
0.8
741
Tumor
0.8
867
Tumor
0.8
357
Tumor
0.8
636
Normal
0.7
857
Tumor
0.7
1013
Tumor
0.7
435
Tumor
0.7
861
Tumor
0.7
473
Tumor
0.7
813
Tumor
0.6
392
Normal
0.6
1043
Tumor
0.6
915
Tumor
0.6
571
Tumor
0.6
911
Tumor
0.6
231
Tumor
0.6
342
Normal
0.6
445
Tumor
0.6
171
Tumor
0.6
923
Tumor
0.6
744
Normal
0.5
697
Tumor
0.5
641
Tumor
0.5
685
Tumor
0.5
123
Tumor
0.5
954
Normal
0.5
863
Tumor
0.5
557
Tumor
0.5
647
Tumor
0.5
616
Normal
0.5
431
Tumor
0.5
921
Tumor
0.4
145
Tumor
0.4
628
Normal
0.4
1021
Tumor
0.4
984
Normal
0.4
423
Tumor
0.4
865
Tumor
0.4
527
Tumor
0.4
465
Tumor
0.4
132
Normal
0.4
922
Normal
0.4
393
Tumor
0.4
553
Tumor
0.4
368
Normal
0.4
1014
Normal
0.4
426
Normal
0.4
957
Tumor
0.4
298
Normal
0.3
411
Tumor
0.3
672
Normal
0.3
618
Normal
0.3
388
Normal
0.3
267
Tumor
0.3
195
Tumor
0.3
878
Normal
0.3
477
Tumor
0.3
686
Normal
0.3
615
Tumor
0.3
866
Normal
0.3
135
Tumor
0.3
868
Normal
0.3
635
Tumor
0.3
981
Tumor
0.3
862
Normal
0.3
447
Tumor
0.3
138
Normal
0.3
642
Normal
0.3
213
Tumor
0.3
513
Tumor
0.3
538
Normal
0.3
721
Tumor
0.3
648
Normal
0.3
361
Tumor
0.3
533
Tumor
0.3
376
Normal
0.3
743
Tumor
0.3
814
Normal
0.3
924
Normal
0.3
953
Tumor
0.3
568
Normal
0.3
572
Normal
0.3
394
Normal
0.3
755
Tumor
0.3
268
Normal
0.3
344
Normal
0.3
354
Normal
0.3
448
Normal
0.3
124
Normal
0.3
332
Normal
0.3
724
Normal
0.3
944
Normal
0.3
742
Normal
0.3
452
Normal
0.3
823
Tumor
0.3
864
Normal
0.3
414
Normal
0.2
713
Tumor
0.2
963
Tumor
0.2
355
Tumor
0.2
664
Normal
0.2
938
Normal
0.2
384
Normal
0.2
698
Normal
0.2
161
Tumor
0.2
422
Normal
0.2
466
Normal
0.2
515
Tumor
0.2
277
Tumor
0.2
696
Normal
0.2
955
Tumor
0.2
778
Normal
0.2
558
Normal
0.2
975
Tumor
0.2
314
Normal
0.2
662
Normal
0.2
564
Normal
0.2
627
Tumor
0.2
278
Normal
0.2
258
Normal
0.2
525
Tumor
0.2
852
Normal
0.2
816
Normal
0.2
146
Normal
0.2
196
Normal
0.2
873
Tumor
0.2
1031
Tumor
0.2
777
Tumor
0.2
396
Normal
0.2
952
Normal
0.2
715
Tumor
0.2
978
Normal
0.2
968
Normal
0.2
147
Tumor
0.2
695
Tumor
0.2
1027
Tumor
0.2
221
Tumor
0.2
284
Normal
0.2
528
Normal
0.1
483
Tumor
0.1
982
Normal
0.1
723
Tumor
0.1
666
Normal
0.1
916
Normal
0.1
214
Normal
0.1
488
Normal
0.1
172
Normal
0.1
1028
Normal
0.1
554
Normal
0.1
471
Tumor
0.1
523
Tumor
0.1
746
Normal
0.1
785
Tumor
0.1
1016
Normal
0.1
722
Normal
0.1
714
Normal
0.1
261
Tumor
0.1
738
Normal
0.1
524
Normal
0.1
484
Normal
0.1
232
Normal
0.1
352
Normal
0.1
574
Normal
0.1
186
Normal
0.1
464
Normal
0.1
191
Tumor
0.1
536
Normal
0.1
913
Tumor
0.1
818
Normal
0.1
1041
Tumor
0.1
966
Normal
0.1
983
Tumor
0.1
286
Normal
0.1
958
Normal
0.1
218
Normal
0.1
114
Normal
0.1
222
Normal
0.1
912
Normal
0.1
462
Normal
0.1
526
Normal
0.1
353
Tumor
0.1
383
Tumor
0.1
881
Tumor
0.1
914
Normal
0.1
436
Normal
0.1
461
Tumor
0.1
745
Tumor
0.1
514
Normal
0.1
976
Normal
0.1
456
Normal
0.1
148
Normal
0.1
128
Normal
0.1
224
Normal
0.1
125
Tumor
0.1
358
Normal
0.1
185
Tumor
0.1
412
Normal
0.0
362
Normal
0.0
217
Tumor
0.0
882
Normal
0.0
786
Normal
0.0
366
Normal
0.0
228
Normal
0.0
716
Normal
0.0
112
Tumor
0.0
162
Normal
0.0
824
Normal
0.0
546
Normal
0.0
1026
Normal
0.0
937
Tumor
0.0
386
Normal
0.0
943
Tumor
0.0
432
Normal
0.0
468
Normal
0.0
444
Normal
0.0
756
Normal
0.0
1025
Tumor
0.0
428
Normal
0.0
1046
Normal
0.0
257
Tumor
0.0
262
Normal
0.0
918
Normal
0.0
433
Tumor
0.0
415
Tumor
0.0
424
Normal
0.0
1015
Tumor
0.0
728
Normal
0.0
491
Tumor
0.0
1022
Normal
0.0
136
Normal
0.0
563
Tumor
0.0
858
Normal
0.0
443
Tumor
0.0
351
Tumor
0.0
142
Normal
0.0
492
Normal
0.0
926
Normal
0.0
446
Normal
0.0
271
Tumor
0.0
328
Normal
0.0
545
Tumor
0.0
518
Normal
0.0
434
Normal
0.0
493
Tumor
0.0
272
Normal
0.0
481
Tumor
0.0
478
Normal
0.0
1044
Normal
0.0
111
Normal
0.0
874
Normal
0.0
212
Normal
0.0
516
Normal
0.0
188
Normal
0.0
356
Normal
0.0
494
Normal
-0.1
665
Tumor
-0.1
956
Normal
-0.1
851
Tumor
-0.1
964
Normal
-0.1
884
Normal
-0.1
737
Tumor
-0.1
187
Tumor
-0.1
917
Tumor
-0.1
498
Normal
-0.1
327
Tumor
-0.1
534
Normal
-0.1
364
Normal
-0.1
141
Tumor
-0.1
223
Tumor
-0.1
663
Tumor
-0.1
312
Normal
-0.1
1032
Normal
-0.1
463
Tumor
-0.1
517
Tumor
-0.1
965
Tumor
-0.1
126
Normal
-0.1
127
Tumor
-0.1
137
Tumor
-0.1
573
Tumor
-0.1
474
Normal
-0.2
497
Tumor
-0.2
192
Normal
-0.2
883
Tumor
-0.2
425
Tumor
-0.2
925
Tumor
-0.2
313
Tumor
-0.2
482
Normal
-0.2
365
Tumor
-0.2
416
Normal
-0.2
472
Normal
-0.2
817
Tumor
-0.2
297
Tumor
-0.2
341
Tumor
-0.2
1045
Tumor
-0.2
567
Tumor
-0.2
815
Tumor
-0.2
413
Tumor
-0.2
487
Tumor
-0.3
421
Tumor
-0.3
727
Tumor
-0.3
343
Tumor
-0.3
877
Tumor
-0.3
395
Tumor
-0.3
131
Tumor
-0.3
1042
Normal
-0.3
535
Tumor
-0.3
363
Tumor
-0.3
427
Tumor
-0.3
617
Tumor
-0.3
671
Tumor
-0.3
375
Tumor
-0.3
467
Tumor
-0.4
285
Tumor
-0.4
211
Tumor
-0.4
951
Tumor
-0.4
311
Tumor
-0.4
455
Tumor
-0.4
537
Tumor
-0.4
967
Tumor
-0.5
391
Tumor
-0.5
113
Tumor
-0.5
331
Tumor
-0.5
387
Tumor
-0.6
283
Tumor
-0.6
385
Tumor
-0.6
661
Tumor
-0.6
367
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
