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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM56 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
49.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
37.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
27.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
26.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
22.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
20.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
19.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
18.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
17.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
17.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
15.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
14.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
13.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
13.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
13.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
12.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
11.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
11.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
10.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
9.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
9.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
7.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
5.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
5.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
4.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
4.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM56 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
46.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
35.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
34.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
33.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
33.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
31.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
30.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
28.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
28.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
28.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
28.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
27.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
26.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
25.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
25.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
25.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
25.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
24.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
24.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
24.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
24.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
23.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
23.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
23.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
23.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
23.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
22.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
22.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
22.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
22.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
22.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
21.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
21.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
21.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
21.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
21.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
21.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
20.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
20.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
20.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
19.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
19.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
19.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
19.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
19.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
19.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
19.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
19.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
18.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
18.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
18.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
18.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
18.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
18.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
18.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
18.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
18.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
18.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
18.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
18.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
18.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
17.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
17.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
17.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
17.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
17.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
17.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
17.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
17.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
17.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
17.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
17.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
16.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
16.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
16.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
16.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
16.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
16.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
16.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
16.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
16.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
16.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
16.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
16.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
15.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
15.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
15.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
15.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
15.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
15.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
15.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
15.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
15.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
15.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
15.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
15.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
15.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
15.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
15.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
14.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
14.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
14.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
14.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
14.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
14.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
14.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
14.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
14.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
13.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
13.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
13.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
13.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
13.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
13.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
13.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
13.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
13.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
13.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
12.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
12.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
12.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
12.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
12.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
12.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
12.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
12.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
12.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
12.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
12.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
11.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
11.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
11.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
11.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
11.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
11.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
11.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
11.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
11.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
11.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
10.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
10.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
10.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
10.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
10.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
9.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
9.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
9.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
9.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
9.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
9.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
9.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
9.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.9
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
8.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
8.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
8.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
8.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
8.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.5
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
8.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
8.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
7.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
7.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
7.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
7.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
7.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
7.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
7.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
6.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
5.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
5.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
4.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
4.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
3.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
3.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM56 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
29.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
27.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
25.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
24.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
24.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
24.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
23.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
21.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
21.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
21.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
20.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
20.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
19.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
19.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
17.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
17.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
16.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
15.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
15.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
14.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
14.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
12.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
12.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
8.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
7.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TRIM56 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
102.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
61.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
54.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
50.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
48.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
42.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
35.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
35.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
35.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
31.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
31.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
29.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
29.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
29.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
28.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
27.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
26.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
25.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
25.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
24.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
24.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
24.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
24.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
23.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
23.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
23.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
23.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
23.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
22.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
22.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
21.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
21.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
21.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
20.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
20.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
20.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
19.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
19.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
19.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
19.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
18.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
18.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.3
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
17.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
17.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
16.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
16.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
16.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
16.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
16.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
16.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
16.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
15.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
15.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
15.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
15.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
15.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
15.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
14.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
14.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
14.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
14.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
14.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
14.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
14.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
13.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
13.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
13.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
12.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
12.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
12.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
12.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
12.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
11.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
11.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
11.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
11.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
11.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
11.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
11.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
11.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
11.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
11.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
10.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
10.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
10.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
10.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
9.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
9.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
9.3
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
9.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
8.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
8.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
7.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
7.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
7.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
6.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
6.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
6.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
6.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
4.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
3.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
3.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.5
CPT0017410003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0092190003
Normal
0.3
CPT0081990003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0078530001
Normal
0.3
CPT0078510003
Tumor
0.3
CPT0001190001
Normal
0.3
CPT0086950003
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0078990003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0064400001
Normal
0.2
CPT0088550004
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0075570001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0011410003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0014370004
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0012570003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0002370001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0013790003
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0069160003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0000660001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0077140001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0012180003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0081880003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0024680001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0001510001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0007470001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0006900003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0020130001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0065810003
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.