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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
35.7
nTPM
GTEx:
35.7
nTPM
FANTOM5:
31.3
Scaled Tags Per Million
Pig:
22.0
nTPM
Mouse:
55.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
35.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 35.7
Samples: 105
Max nTPM: 78.4
Min nTPM: 10.1
Std nTPM: 9.4
Median nTPM:
491_1
89 years, female
78.4
490_1
67 years, female
72.5
413_1
59 years, female
57.6
119_1
70 years, female
51.5
315_1
62 years, female
50.7
120_1
70 years, female
49.7
89_1
63 years, male
48.6
42_1
85 years, male
48.2
501_1
88 years, male
47.3
81_1
67 years, male
46.7
109_1
81 years, female
45.5
149_1
88 years, male
45.4
99_1
64 years, male
44.5
117_1
61 years, male
44.3
41_1
94 years, female
43.9
307_1
66 years, female
43.6
162_1
79 years, female
42.8
32_1
67 years, male
42.4
415_1
77 years, female
42.3
447_1
81 years, male
42.3
466_1
57 years, female
42.3
142_1
61 years, female
41.7
347_1
72 years, male
41.4
18_1
88 years, male
40.9
145_1
84 years, male
40.7
229_1
69 years, female
40.3
288_1
66 years, female
40.1
324_1
76 years, male
40.0
313_1
79 years, female
39.6
17_1
71 years, male
39.2
452_1
88 years, female
39.1
314_1
67 years, male
38.8
384_1
83 years, male
38.7
414_1
84 years, female
38.6
35_1
74 years, female
38.3
126_1
63 years, male
38.3
311_1
78 years, male
38.3
396_1
62 years, male
38.3
506_1
65 years, male
38.2
6_1
73 years, female
38.1
43_1
64 years, female
38.1
137_1
83 years, male
37.4
115_1
83 years, male
37.1
9_1
66 years, female
36.7
139_1
64 years, female
36.7
153_1
70 years, female
36.6
355_1
70 years, female
36.5
4_1
88 years, female
35.9
526_1
61 years, male
35.9
2_1
77 years, female
35.8
217_1
76 years, male
35.6
173_1
67 years, male
34.7
266_1
85 years, male
34.5
348_1
84 years, male
34.3
499_1
55 years, female
34.3
321_1
62 years, female
34.1
308_1
70 years, female
34.0
375_1
74 years, female
33.8
379_1
60 years, male
33.5
246_1
77 years, male
33.1
265_1
87 years, male
32.9
495_1
57 years, female
32.9
468_1
89 years, male
32.8
243_1
75 years, male
32.6
291_1
76 years, male
32.5
376_1
75 years, female
32.0
386_1
76 years, male
31.6
295_1
61 years, female
31.4
353_1
82 years, female
31.1
237_1
82 years, male
30.9
352_1
62 years, male
30.9
404_1
82 years, female
30.8
254_1
77 years, female
30.6
172_1
72 years, female
30.3
335_1
73 years, female
30.0
518_1
75 years, female
30.0
351_1
91 years, male
29.9
317_1
60 years, male
29.7
503_1
68 years, male
29.7
389_1
86 years, female
29.4
319_1
81 years, male
29.0
377_1
82 years, female
28.7
356_1
87 years, female
28.2
350_1
84 years, female
28.1
286_1
68 years, female
28.0
349_1
83 years, male
28.0
292_1
71 years, male
27.8
318_1
68 years, male
27.8
480_1
63 years, male
27.8
251_1
78 years, male
27.6
354_1
81 years, female
27.6
405_1
91 years, male
27.3
189_1
76 years, male
27.1
293_1
68 years, female
27.1
406_1
79 years, male
27.1
517_1
88 years, male
26.2
394_1
75 years, female
25.8
425_1
59 years, female
25.5
322_1
76 years, male
24.7
264_1
73 years, female
24.3
316_1
62 years, male
23.2
320_1
89 years, female
22.9
177_1
74 years, male
21.7
218_1
71 years, female
17.7
163_1
78 years, male
10.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
