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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
25.5
nTPM
HPA Brain:
28.0
nTPM
GTEx:
25.5
nTPM
FANTOM5:
19.4
Scaled Tags Per Million
Pig:
59.1
nTPM
Mouse:
67.9
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.0
Sample id
Sample description
nTPM
Amygdala nTPM: 22.1
2814
Male, age 76, right hemisphere
30.4
1987
Female, age 91, left hemisphere
27.4
2517
Female, age 94, left hemisphere
21.1
2695
Female, age 67, right hemisphere
16.2
2514
Male, age 75, right hemisphere
15.3
Basal amygdala nTPM: 23.5
2685
Female, age 94, left hemisphere
29.2
1955
Male, age 76, both hemispheres
26.9
2243
Female, age 91, right hemisphere
25.9
2827
Female, age 67, right hemisphere
21.7
2110
Male, age 80, left hemisphere
19.2
2609
Male, age 75, right hemisphere
18.3
Central amygdala nTPM: 28.0
2826
Female, age 94, left hemisphere
34.6
2701
Female, age 91, right hemisphere
30.3
1905
Male, age 76, both hemispheres
28.0
2239
Male, age 80, left hemisphere
27.3
2515
Male, age 75, right hemisphere
19.8
Corticomedial amygdala nTPM: 22.5
2429
Female, age 94, left hemisphere
26.2
2242
Female, age 91, right hemisphere
24.5
2535
Female, age 67, right hemisphere
24.4
2829
Male, age 80, left hemisphere
23.0
2240
Male, age 76, both hemispheres
21.1
2428
Male, age 75, right hemisphere
15.8
Lateral amygdala nTPM: 25.9
2534
Female, age 94, left hemisphere
35.8
1883
Male, age 76, both hemispheres
30.7
2255
Female, age 91, right hemisphere
27.5
2256
Male, age 80, left hemisphere
21.9
2830
Female, age 67, right hemisphere
21.1
2516
Male, age 75, right hemisphere
18.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 25.5
Samples: 152
Max nTPM: 72.7
Min nTPM: 6.1
Std nTPM: 9.6
Median nTPM: 23.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
72.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
56.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
47.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
46.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
43.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
42.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
42.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
42.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
41.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
40.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
39.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
38.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
38.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
37.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
37.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
37.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
37.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
37.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
36.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
36.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
36.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
36.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
34.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
34.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
34.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
34.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
34.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
33.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
32.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
32.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
32.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
32.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
31.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
29.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
29.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
29.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
29.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
29.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
28.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
28.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
28.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
28.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
28.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
28.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
27.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
27.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
27.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
27.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
27.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
27.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
26.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
26.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
26.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
26.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
25.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
25.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
25.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
25.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
25.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
25.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
25.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
25.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
25.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
25.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
25.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
24.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
24.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
24.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
24.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
23.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
23.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
23.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
23.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
23.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
23.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
23.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
23.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
23.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
22.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
22.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
22.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
22.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
22.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
22.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
21.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
21.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
21.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
21.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
21.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
21.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
21.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
20.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
20.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
20.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
20.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
20.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
20.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
20.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
20.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
20.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
20.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
20.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
19.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
19.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
19.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
19.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
19.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
19.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
19.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
19.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
19.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
18.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
18.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
18.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
18.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
18.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
18.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
18.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
17.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
17.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
17.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
16.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
15.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
15.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
15.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
15.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
15.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
15.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
14.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
14.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
13.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
12.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
12.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
12.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
12.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
12.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
12.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
11.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
11.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
11.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
10.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
6.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 67.9
Samples: 4
Max nTPM: 79.8
Min nTPM: 58.1
Sample A
Male
66.4
Sample B
Male
79.8
Sample C
Female
58.1
Sample D
Female
67.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.