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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.7
nTPM
HPA Brain:
25.6
nTPM
GTEx:
55.7
nTPM
FANTOM5:
18.9
Scaled Tags Per Million
Pig:
10.4
nTPM
Mouse:
64.9
nTPM
Allen mouse:
3.6
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.6
Sample id
Sample description
nTPM
Amygdala nTPM: 25.6
2695
Female, age 67, right hemisphere
27.7
2814
Male, age 76, right hemisphere
27.6
2514
Male, age 75, right hemisphere
25.2
2517
Female, age 94, left hemisphere
25.0
1987
Female, age 91, left hemisphere
22.5
Basal amygdala nTPM: 22.9
2609
Male, age 75, right hemisphere
27.1
1955
Male, age 76, both hemispheres
24.1
2110
Male, age 80, left hemisphere
22.9
2827
Female, age 67, right hemisphere
21.6
2243
Female, age 91, right hemisphere
21.1
2685
Female, age 94, left hemisphere
20.5
Central amygdala nTPM: 24.7
2515
Male, age 75, right hemisphere
27.6
1905
Male, age 76, both hemispheres
25.6
2239
Male, age 80, left hemisphere
25.4
2701
Female, age 91, right hemisphere
22.9
2826
Female, age 94, left hemisphere
22.0
Corticomedial amygdala nTPM: 23.3
2428
Male, age 75, right hemisphere
28.9
2829
Male, age 80, left hemisphere
25.4
2429
Female, age 94, left hemisphere
22.3
2242
Female, age 91, right hemisphere
22.0
2240
Male, age 76, both hemispheres
21.4
2535
Female, age 67, right hemisphere
19.7
Lateral amygdala nTPM: 24.1
2516
Male, age 75, right hemisphere
29.2
1883
Male, age 76, both hemispheres
26.5
2534
Female, age 94, left hemisphere
23.6
2256
Male, age 80, left hemisphere
23.2
2830
Female, age 67, right hemisphere
21.2
2255
Female, age 91, right hemisphere
21.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 55.7
Samples: 152
Max nTPM: 160.7
Min nTPM: 18.8
Std nTPM: 16.5
Median nTPM: 52.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
160.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
115.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
110.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
107.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
93.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
92.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
87.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
85.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
84.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
80.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
78.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
77.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
76.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
73.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
72.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
70.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
70.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
69.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
67.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
66.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
66.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
66.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
64.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
64.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
64.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
64.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
64.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
62.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
62.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
62.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
62.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
61.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
61.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
60.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
60.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
60.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
60.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
60.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
60.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
60.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
60.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
59.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
59.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
59.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
59.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
58.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
58.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
58.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
58.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
57.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
57.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
56.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
56.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
56.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
55.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
55.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
55.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
55.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
55.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
55.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
55.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
54.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
54.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
54.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
54.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
53.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
53.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
53.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
53.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
53.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
52.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
52.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
52.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
52.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
51.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
51.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
51.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
51.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
51.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
50.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
50.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
50.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
50.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
50.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
50.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
50.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
50.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
49.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
49.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
49.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
49.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
49.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
48.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
48.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
48.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
48.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
48.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
47.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
47.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
47.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
47.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
47.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
47.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
47.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
47.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
46.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
46.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
46.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
46.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
46.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
46.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
45.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
45.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
45.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
44.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
44.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
44.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
44.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
44.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
44.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
44.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
43.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
43.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
43.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
43.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
43.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
43.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
43.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
42.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
42.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
40.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
39.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
37.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
37.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
37.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
35.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
34.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
32.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
31.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
28.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
18.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
64.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 64.9
Samples: 4
Max nTPM: 67.8
Min nTPM: 61.9
Sample A
Male
64.4
Sample B
Male
65.4
Sample C
Female
67.8
Sample D
Female
61.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.